RNA–Protein interactions for RNA: ENST00000637679.1

NRXN1-262, Transcript of neurexin 1, human

TSL 5

Gene NRXN1, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-262	ENST00000637679	PTPRB	P23467	1997 aa		0.37	□□□□□ -2.35
NRXN1-262	ENST00000637679	POLR2A	P24928	1970 aa	Known RBP	0.37	□□□□□ -2.35
NRXN1-262	ENST00000637679	UBR3	Q6ZT12	1888 aa		0.37	□□□□□ -2.35
NRXN1-262	ENST00000637679	FAM208A	Q9UK61	1670 aa	Known RBP	0.37	□□□□□ -2.35
NRXN1-262	ENST00000637679	CHD3	Q12873	2000 aa	Known RBP	0.37	□□□□□ -2.35
NRXN1-262	ENST00000637679	PLXNC1	O60486	1568 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	GREB1L	Q9C091	1923 aa	Predicted RBP	0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	PATJ	Q8NI35	1801 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	TNRC6B	Q9UPQ9	1833 aa	Known RBP	0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	KIAA0232	Q92628	1395 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	TNR	Q92752	1358 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	RAB3GAP2	Q9H2M9	1393 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679		A0A087WV48	116 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	TEX51	A0A1B0GUA7	166 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	PMS2P1	A4D2B8	440 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	ERVH48-1	M5A8F1	160 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	CLDN9	O95484	217 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	KRT1	P04264	644 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	GJB1	P08034	283 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	IL9	P15248	144 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	SYN1	P17600	705 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	ATF3	P18847	181 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	DNAJB2	P25686	324 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	SRPK2	P78362	688 aa	Known RBP	0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	FOXK1	P85037	733 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	SP3	Q02447	781 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	ZP2	Q05996	745 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	LTB	Q06643	244 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	SIGLEC14	Q08ET2	396 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	NFYC	Q13952	458 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	COL19A1	Q14993	1142 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	SHH	Q15465	462 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	HNRNPUL2	Q1KMD3	747 aa	Known RBP	0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	SLC35G1	Q2M3R5	365 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	LEXM	Q3ZCV2	418 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	SLC9C1	Q4G0N8	1177 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	AMER1	Q5JTC6	1135 aa	Predicted RBP	0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	SERTAD4-AS1	Q5TG53	156 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	KRTAP5-3	Q6L8H2	238 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	ESRP1	Q6NXG1	681 aa	Known RBP	0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	C7orf61	Q8IZ16	206 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	NAGS	Q8N159	534 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	ACBD4	Q8NC06	268 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	KCNG4	Q8TDN1	519 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	DDX17	Q92841	729 aa	Known RBP	0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	CCDC102A	Q96A19	550 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	BORCS6	Q96GS4	357 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	TNIP3	Q96KP6	325 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	SCNM1	Q9BWG6	230 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	PRDM12	Q9H4Q4	367 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	PRORY	Q9H606	182 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	AVEN	Q9NQS1	362 aa	Predicted RBP	0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	FBXO28	Q9NVF7	368 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	WDR70	Q9NW82	654 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	ZBTB47	Q9UFB7	747 aa	Predicted RBP	0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	SEPT3	Q9UH03	358 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	MUTYH	Q9UIF7	546 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	STAG3	Q9UJ98	1225 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	MSRB2	Q9Y3D2	182 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	NEU2	Q9Y3R4	380 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	PCDHGC5	Q9Y5F6	944 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	MAFB	Q9Y5Q3	323 aa	Predicted RBP	0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	SLC4A7	Q9Y6M7	1214 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	ARFGEF2	Q9Y6D5	1785 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	URB1	O60287	2271 aa	Known RBP	0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	SDK2	Q58EX2	2172 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	PHLPP2	Q6ZVD8	1323 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	PCDH11X	Q9BZA7	1347 aa		0.36	□□□□□ -2.35
NRXN1-262	ENST00000637679	MGAM	O43451	1857 aa		0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	PIK3C2B	O00750	1634 aa		0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679		A0A1B0GUL6	1792 aa		0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	NFAT5	O94916	1531 aa		0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	APOB	P04114	4563 aa	Known RBP	0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	DNAH10	Q8IVF4	4471 aa		0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	GRXCR2	A6NFK2	248 aa		0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	LILRB3	O75022	631 aa		0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	LGR5	O75473	907 aa		0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	PLEKHG5	O94827	1062 aa		0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	DDN	O94850	711 aa	Predicted RBP	0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	FCHSD2	O94868	740 aa		0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	NADK	O95544	446 aa	Predicted RBP	0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	TBC1D8	O95759	1140 aa		0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	SLC10A3	P09131	477 aa		0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	MED14OS	P0DP75	135 aa		0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	CD99	P14209	185 aa		0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	SPINK2	P20155	84 aa		0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	IGFBP4	P22692	258 aa		0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	FSHR	P23945	695 aa		0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	KLRK1	P26718	216 aa		0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	PTGS2	P35354	604 aa		0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	GGT5	P36269	586 aa		0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	WAS	P42768	502 aa		0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	LIMK1	P53667	647 aa		0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	YBX1	P67809	324 aa	Known RBP	0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	PDE3B	Q13370	1112 aa		0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	TMEM132A	Q24JP5	1023 aa		0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	PUS10	Q3MIT2	529 aa	Known RBP	0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	TMEM259	Q4ZIN3	620 aa		0.35	□□□□□ -2.35
NRXN1-262	ENST00000637679	VARS2	Q5ST30	1063 aa	Known RBP	0.35	□□□□□ -2.35

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms