RNA–Protein interactions for RNA: ENST00000637538.1

CLCN2-220, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 1,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-220ENST00000637538 AKNAD1Q5T1N1 836 aa19.82■□□□□ 0.76
CLCN2-220ENST00000637538 APOBEC3HQ6NTF7 200 aaKnown RBP19.82■□□□□ 0.76
CLCN2-220ENST00000637538 NCOA7Q8NI08 942 aa19.82■□□□□ 0.76
CLCN2-220ENST00000637538 NKX2-3Q8TAU0 364 aa19.82■□□□□ 0.76
CLCN2-220ENST00000637538 TCEANC2Q96MN5 208 aa19.82■□□□□ 0.76
CLCN2-220ENST00000637538 SERPINA10Q9UK55 444 aa19.82■□□□□ 0.76
CLCN2-220ENST00000637538 NEDD4P46934 1319 aa19.82■□□□□ 0.76
CLCN2-220ENST00000637538 USP17L12C9JPN9 530 aa19.81■□□□□ 0.76
CLCN2-220ENST00000637538 USP17L21D6R901 530 aa19.81■□□□□ 0.76
CLCN2-220ENST00000637538 RAD17O75943 681 aa19.81■□□□□ 0.76
CLCN2-220ENST00000637538 FGRP09769 529 aa19.81■□□□□ 0.76
CLCN2-220ENST00000637538 ARPP21Q9UBL0 812 aaPredicted RBP19.81■□□□□ 0.76
CLCN2-220ENST00000637538 LIMCH1Q9UPQ0 1083 aa19.81■□□□□ 0.76
CLCN2-220ENST00000637538 ECM29Q5VYK3 1845 aa19.81■□□□□ 0.76
CLCN2-220ENST00000637538 SMIM22K7EJ46 135 aa19.81■□□□□ 0.76
CLCN2-220ENST00000637538 ANTXR2P58335 489 aa19.81■□□□□ 0.76
CLCN2-220ENST00000637538 CXCL9Q07325 125 aa19.81■□□□□ 0.76
CLCN2-220ENST00000637538 TEX11Q8IYF3 940 aa19.81■□□□□ 0.76
CLCN2-220ENST00000637538 TGFBRAP1Q8WUH2 860 aa19.81■□□□□ 0.76
CLCN2-220ENST00000637538 ROBO3Q96MS0 1386 aa19.8■□□□□ 0.76
CLCN2-220ENST00000637538 CYP2D7A0A087X1C5 515 aa19.8■□□□□ 0.76
CLCN2-220ENST00000637538 DDIT3P35638 169 aa19.8■□□□□ 0.76
CLCN2-220ENST00000637538 USP5P45974 858 aa19.8■□□□□ 0.76
CLCN2-220ENST00000637538 ANKRD1Q15327 319 aa19.8■□□□□ 0.76
CLCN2-220ENST00000637538 ANP32EQ9BTT0 268 aa19.8■□□□□ 0.76
CLCN2-220ENST00000637538 INCENPQ9NQS7 918 aa19.8■□□□□ 0.76
CLCN2-220ENST00000637538 FLT1P17948 1338 aa19.79■□□□□ 0.76
CLCN2-220ENST00000637538 WDHD1O75717 1129 aaPredicted RBP19.79■□□□□ 0.76
CLCN2-220ENST00000637538 CDC42EP5Q6NZY7 148 aa19.79■□□□□ 0.76
CLCN2-220ENST00000637538 Q6ZUG5 572 aa19.79■□□□□ 0.76
CLCN2-220ENST00000637538 JDP2Q8WYK2 163 aa19.79■□□□□ 0.76
CLCN2-220ENST00000637538 RNF41Q9H4P4 317 aaPredicted RBP19.79■□□□□ 0.76
CLCN2-220ENST00000637538 CNNM2Q9H8M5 875 aa19.79■□□□□ 0.76
CLCN2-220ENST00000637538 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.79■□□□□ 0.76
CLCN2-220ENST00000637538 MINDY4BA8MYZ0 360 aa19.78■□□□□ 0.76
CLCN2-220ENST00000637538 USP17L8P0C7I0 530 aa19.78■□□□□ 0.76
CLCN2-220ENST00000637538 CYP2D6P10635 497 aa19.78■□□□□ 0.76
CLCN2-220ENST00000637538 PCP11498 1178 aaKnown RBP19.78■□□□□ 0.76
CLCN2-220ENST00000637538 MCM5P33992 734 aa19.78■□□□□ 0.76
CLCN2-220ENST00000637538 EVX2Q03828 476 aa19.78■□□□□ 0.76
CLCN2-220ENST00000637538 C12orf60Q5U649 245 aa19.78■□□□□ 0.76
CLCN2-220ENST00000637538 MFSD6Q6ZSS7 791 aa19.78■□□□□ 0.76
CLCN2-220ENST00000637538 NOL8Q76FK4 1167 aaKnown RBP19.78■□□□□ 0.76
CLCN2-220ENST00000637538 CYB5R4Q7L1T6 521 aa19.78■□□□□ 0.76
CLCN2-220ENST00000637538 RALYLQ86SE5 291 aaKnown RBP19.78■□□□□ 0.76
CLCN2-220ENST00000637538 MAPKAPK5Q8IW41 473 aa19.78■□□□□ 0.76
CLCN2-220ENST00000637538 AGBL3Q8NEM8 1001 aa19.78■□□□□ 0.76
CLCN2-220ENST00000637538 ZSCAN31Q96LW9 406 aaPredicted RBP19.78■□□□□ 0.76
CLCN2-220ENST00000637538 MCM9Q9NXL9 1143 aa19.78■□□□□ 0.76
CLCN2-220ENST00000637538 TPCN1Q9ULQ1 816 aa19.78■□□□□ 0.76
CLCN2-220ENST00000637538 PCDHAC2Q9Y5I4 1007 aa19.78■□□□□ 0.76
CLCN2-220ENST00000637538 DICER1Q9UPY3 1922 aaKnown RBP19.77■□□□□ 0.76
CLCN2-220ENST00000637538 FZD9O00144 591 aa19.77■□□□□ 0.76
CLCN2-220ENST00000637538 PRC1O43663 620 aa19.77■□□□□ 0.76
CLCN2-220ENST00000637538 LARGE1O95461 756 aa19.77■□□□□ 0.76
CLCN2-220ENST00000637538 TRDNQ13061 729 aa19.77■□□□□ 0.76
CLCN2-220ENST00000637538 CIAPIN1Q6FI81 312 aa19.77■□□□□ 0.76
CLCN2-220ENST00000637538 LARP6Q9BRS8 491 aaKnown RBP19.77■□□□□ 0.76
CLCN2-220ENST00000637538 KRT23Q9C075 422 aa19.77■□□□□ 0.76
CLCN2-220ENST00000637538 USP40Q9NVE5 1235 aa19.77■□□□□ 0.76
CLCN2-220ENST00000637538 B4E1Z4 1266 aa19.76■□□□□ 0.75
CLCN2-220ENST00000637538 EVCP57679 992 aa19.76■□□□□ 0.75
CLCN2-220ENST00000637538 LRRC2Q9BYS8 371 aa19.76■□□□□ 0.75
CLCN2-220ENST00000637538 DDX4Q9NQI0 724 aaKnown RBP19.76■□□□□ 0.75
CLCN2-220ENST00000637538 SH2B1Q9NRF2 756 aaPredicted RBP19.76■□□□□ 0.75
CLCN2-220ENST00000637538 ZBTB12Q9Y330 459 aaPredicted RBP19.76■□□□□ 0.75
CLCN2-220ENST00000637538 MYH1P12882 1939 aa19.76■□□□□ 0.75
CLCN2-220ENST00000637538 ORC4O43929 436 aa19.76■□□□□ 0.75
CLCN2-220ENST00000637538 SBF1O95248 1867 aa19.76■□□□□ 0.75
CLCN2-220ENST00000637538 LMNB1P20700 586 aa19.76■□□□□ 0.75
CLCN2-220ENST00000637538 ST3GAL1Q11201 340 aa19.76■□□□□ 0.75
CLCN2-220ENST00000637538 TNIP1Q15025 636 aa19.76■□□□□ 0.75
CLCN2-220ENST00000637538 ME3Q16798 604 aa19.76■□□□□ 0.75
CLCN2-220ENST00000637538 C9orf131Q5VYM1 1079 aa19.76■□□□□ 0.75
CLCN2-220ENST00000637538 CHST3Q7LGC8 479 aa19.76■□□□□ 0.75
CLCN2-220ENST00000637538 SPRYD3Q8NCJ5 442 aa19.76■□□□□ 0.75
CLCN2-220ENST00000637538 INTS4Q96HW7 963 aaKnown RBP19.76■□□□□ 0.75
CLCN2-220ENST00000637538 NPM3O75607 178 aaKnown RBP19.75■□□□□ 0.75
CLCN2-220ENST00000637538 CFAP100Q494V2 611 aa19.75■□□□□ 0.75
CLCN2-220ENST00000637538 BRF1Q92994 677 aa19.75■□□□□ 0.75
CLCN2-220ENST00000637538 MTA3Q9BTC8 594 aa19.75■□□□□ 0.75
CLCN2-220ENST00000637538 IDI2Q9BXS1 227 aa19.75■□□□□ 0.75
CLCN2-220ENST00000637538 KDM4AO75164 1064 aa19.74■□□□□ 0.75
CLCN2-220ENST00000637538 MTMR14Q8NCE2 650 aa19.74■□□□□ 0.75
CLCN2-220ENST00000637538 GPHNQ9NQX3 736 aaPredicted RBP19.74■□□□□ 0.75
CLCN2-220ENST00000637538 ZSWIM5Q9P217 1185 aa19.74■□□□□ 0.75
CLCN2-220ENST00000637538 SH2B2O14492 632 aaPredicted RBP19.73■□□□□ 0.75
CLCN2-220ENST00000637538 MMP14P50281 582 aa19.73■□□□□ 0.75
CLCN2-220ENST00000637538 PLCD1P51178 756 aa19.73■□□□□ 0.75
CLCN2-220ENST00000637538 IGDCC4Q8TDY8 1250 aa19.73■□□□□ 0.75
CLCN2-220ENST00000637538 ZBED3Q96IU2 234 aaPredicted RBP19.73■□□□□ 0.75
CLCN2-220ENST00000637538 SLKQ9H2G2 1235 aaPredicted RBP19.73■□□□□ 0.75
CLCN2-220ENST00000637538 RNF181Q9P0P0 153 aa19.73■□□□□ 0.75
CLCN2-220ENST00000637538 SAP30BPQ9UHR5 308 aaKnown RBP19.73■□□□□ 0.75
CLCN2-220ENST00000637538 SPDYE2BA6NHP3 402 aa19.72■□□□□ 0.75
CLCN2-220ENST00000637538 SLC3A2P08195 630 aaKnown RBP19.72■□□□□ 0.75
CLCN2-220ENST00000637538 SPDYE6P0CI01 402 aa19.72■□□□□ 0.75
CLCN2-220ENST00000637538 RPS12P25398 132 aaKnown RBP19.72■□□□□ 0.75
CLCN2-220ENST00000637538 NT5C2P49902 561 aa19.72■□□□□ 0.75
CLCN2-220ENST00000637538 NFIAQ12857 509 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms