RNA–Protein interactions for RNA: ENST00000637490.1

SYNGAP1-221, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 132 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-221ENST00000637490 STAMBPO95630 424 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 PENKP01210 267 aaPredicted RBP2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 ZNF16P17020 682 aaPredicted RBP2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 GNAT2P19087 354 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 BTF3P20290 206 aaKnown RBP2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 HNRNPH1P31943 449 aaKnown RBP2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 HSPA1LP34931 641 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 HSPA4P34932 840 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 MAGEA10P43363 369 aaPredicted RBP2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 TRAPPC10P48553 1259 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 KIF11P52732 1056 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 CLNS1AP54105 237 aaKnown RBP2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 SNX16P57768 344 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 TUBA4AP68366 448 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 PHEXP78562 749 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 BASP1P80723 227 aaKnown RBP2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 LMNB2Q03252 620 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 ITIH3Q06033 890 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 SCRN1Q12765 414 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 DDX10Q13206 875 aaKnown RBP2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 CUL3Q13618 768 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 BTG3Q14201 252 aaPredicted RBP2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 SMC1AQ14683 1233 aaKnown RBP2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 COG2Q14746 738 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 VPS72Q15906 364 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 ENOX2Q16206 610 aaKnown RBP2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 TRIM71Q2Q1W2 868 aaKnown RBP2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 C8orf34Q49A92 452 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 C10orf76Q5T2E6 689 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 RNF187Q5TA31 235 aaPredicted RBP2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 SPATA1Q5VX52 437 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 CREB3L3Q68CJ9 461 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 KANK3Q6NY19 840 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 MTHFD1LQ6UB35 978 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 MCM10Q7L590 875 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 PPFIBP1Q86W92 1011 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 LILRB2Q8N423 598 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 ESX1Q8N693 406 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 PDCD7Q8N8D1 485 aaKnown RBP2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 TEX19Q8NA77 164 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 SPC24Q8NBT2 197 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 SPDYE1Q8NFV5 336 aaPredicted RBP2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 TNIP2Q8NFZ5 429 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 NEK11Q8NG66 645 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 PPP1R14CQ8TAE6 165 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 KIAA1524Q8TCG1 905 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 TMC2Q8TDI7 906 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 GIPC2Q8TF65 315 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 SPIRE2Q8WWL2 714 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 CDKL2Q92772 493 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 CFAP36Q96G28 342 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 CABS1Q96KC9 395 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 CTAGE1Q96RT6 745 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 FAM167BQ9BTA0 163 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 NACAP1Q9BZK3 213 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 DNAI2Q9GZS0 605 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 ABCG4Q9H172 646 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 VPS33BQ9H267 617 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 CNNM2Q9H8M5 875 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 KMT5AQ9NQR1 393 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 PLSCR2Q9NRY7 297 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 TUBGCP4Q9UGJ1 667 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 TBK1Q9UHD2 729 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 CIDEBQ9UHD4 219 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 HDAC9Q9UKV0 1011 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 FAM184BQ9ULE4 1060 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 TPCN1Q9ULQ1 816 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 CEP131Q9UPN4 1083 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 ZNF148Q9UQR1 794 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 TRAF3IP3Q9Y228 551 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 TBX22Q9Y458 520 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 DAAM1Q9Y4D1 1078 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 SPO11Q9Y5K1 396 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 COL4A3BPQ9Y5P4 624 aa2.9□□□□□ -1.95
SYNGAP1-221ENST00000637490 CCNB3Q8WWL7 1395 aa2.89□□□□□ -1.95
SYNGAP1-221ENST00000637490 A0A0B4J203 849 aa2.89□□□□□ -1.95
SYNGAP1-221ENST00000637490 FAM170AA1A519 330 aa2.89□□□□□ -1.95
SYNGAP1-221ENST00000637490 ERICH2A1L162 156 aa2.89□□□□□ -1.95
SYNGAP1-221ENST00000637490 CCDC162PA2VCL2 907 aa2.89□□□□□ -1.95
SYNGAP1-221ENST00000637490 GRXCR2A6NFK2 248 aa2.89□□□□□ -1.95
SYNGAP1-221ENST00000637490 A6NJY4 79 aa2.89□□□□□ -1.95
SYNGAP1-221ENST00000637490 M0R2C6 588 aa2.89□□□□□ -1.95
SYNGAP1-221ENST00000637490 STXBP3O00186 592 aa2.89□□□□□ -1.95
SYNGAP1-221ENST00000637490 NDUFAB1O14561 156 aa2.89□□□□□ -1.95
SYNGAP1-221ENST00000637490 LSM1O15116 133 aaKnown RBP2.89□□□□□ -1.95
SYNGAP1-221ENST00000637490 TBX3O15119 743 aa2.89□□□□□ -1.95
SYNGAP1-221ENST00000637490 ORC4O43929 436 aa2.89□□□□□ -1.95
SYNGAP1-221ENST00000637490 ZEB2O60315 1214 aa2.89□□□□□ -1.95
SYNGAP1-221ENST00000637490 TSPAN1O60635 241 aa2.89□□□□□ -1.95
SYNGAP1-221ENST00000637490 SNX2O60749 519 aa2.89□□□□□ -1.95
SYNGAP1-221ENST00000637490 TCEA3O75764 348 aa2.89□□□□□ -1.95
SYNGAP1-221ENST00000637490 BAIAP3O94812 1187 aa2.89□□□□□ -1.95
SYNGAP1-221ENST00000637490 HSPA8P11142 646 aaKnown RBP2.89□□□□□ -1.95
SYNGAP1-221ENST00000637490 GYS1P13807 737 aa2.89□□□□□ -1.95
SYNGAP1-221ENST00000637490 EZRP15311 586 aaKnown RBP2.89□□□□□ -1.95
SYNGAP1-221ENST00000637490 ALOX15P16050 662 aaPredicted RBP2.89□□□□□ -1.95
SYNGAP1-221ENST00000637490 ATF7P17544 494 aaPredicted RBP2.89□□□□□ -1.95
SYNGAP1-221ENST00000637490 KCNA6P17658 529 aa2.89□□□□□ -1.95
SYNGAP1-221ENST00000637490 ENDOUP21128 410 aaKnown RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms