RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 CYP2E1P05181 493 aaPredicted RBP22.34■■□□□ 1.17
CLN6-210ENST00000635747 PLCG2P16885 1265 aa22.34■■□□□ 1.17
CLN6-210ENST00000635747 RHBDL3P58872 404 aa22.34■■□□□ 1.17
CLN6-210ENST00000635747 PPATQ06203 517 aa22.34■■□□□ 1.17
CLN6-210ENST00000635747 PPIL2Q13356 520 aa22.34■■□□□ 1.17
CLN6-210ENST00000635747 ZFPM1Q8IX07 1006 aa22.34■■□□□ 1.17
CLN6-210ENST00000635747 RHPN1Q8TCX5 695 aa22.34■■□□□ 1.17
CLN6-210ENST00000635747 CNKSR2Q8WXI2 1034 aa22.34■■□□□ 1.17
CLN6-210ENST00000635747 RFX7Q2KHR2 1363 aa22.34■■□□□ 1.17
CLN6-210ENST00000635747 CCL15-CCL14A0A0B4J2E2 113 aa22.33■■□□□ 1.17
CLN6-210ENST00000635747 RAB11FIP3O75154 756 aa22.33■■□□□ 1.17
CLN6-210ENST00000635747 CETPP11597 493 aa22.33■■□□□ 1.17
CLN6-210ENST00000635747 SNAPC2Q13487 334 aa22.33■■□□□ 1.17
CLN6-210ENST00000635747 PICALMQ13492 652 aa22.33■■□□□ 1.17
CLN6-210ENST00000635747 CCL15Q16663 113 aa22.33■■□□□ 1.17
CLN6-210ENST00000635747 NOL9Q5SY16 702 aaKnown RBP22.33■■□□□ 1.17
CLN6-210ENST00000635747 AACSQ86V21 672 aa22.33■■□□□ 1.17
CLN6-210ENST00000635747 CLASRPQ8N2M8 674 aaKnown RBP22.33■■□□□ 1.17
CLN6-210ENST00000635747 PTPN18Q99952 460 aa22.33■■□□□ 1.17
CLN6-210ENST00000635747 OTOFQ9HC10 1997 aa22.32■■□□□ 1.16
CLN6-210ENST00000635747 CCDC85CA6NKD9 419 aa22.32■■□□□ 1.16
CLN6-210ENST00000635747 INPP5BP32019 993 aa22.32■■□□□ 1.16
CLN6-210ENST00000635747 ZAP70P43403 619 aa22.32■■□□□ 1.16
CLN6-210ENST00000635747 MAP3K10Q02779 954 aa22.32■■□□□ 1.16
CLN6-210ENST00000635747 TMED8Q6PL24 325 aaPredicted RBP22.32■■□□□ 1.16
CLN6-210ENST00000635747 BRI3BPQ8WY22 251 aa22.32■■□□□ 1.16
CLN6-210ENST00000635747 ZCCHC17Q9NP64 241 aaKnown RBP22.32■■□□□ 1.16
CLN6-210ENST00000635747 DDX4Q9NQI0 724 aaKnown RBP22.32■■□□□ 1.16
CLN6-210ENST00000635747 TLR7Q9NYK1 1049 aaKnown RBP22.32■■□□□ 1.16
CLN6-210ENST00000635747 LAMB1P07942 1786 aa22.31■■□□□ 1.16
CLN6-210ENST00000635747 IRF6O14896 467 aa22.31■■□□□ 1.16
CLN6-210ENST00000635747 SIRT2Q8IXJ6 389 aa22.31■■□□□ 1.16
CLN6-210ENST00000635747 R3HDMLQ9H3Y0 253 aa22.31■■□□□ 1.16
CLN6-210ENST00000635747 AK9Q5TCS8 1911 aa22.3■■□□□ 1.16
CLN6-210ENST00000635747 DDTLA6NHG4 134 aaPredicted RBP22.3■■□□□ 1.16
CLN6-210ENST00000635747 PPP4CP60510 307 aa22.3■■□□□ 1.16
CLN6-210ENST00000635747 TEX11Q8IYF3 940 aa22.3■■□□□ 1.16
CLN6-210ENST00000635747 IL1RAPL2Q9NP60 686 aa22.3■■□□□ 1.16
CLN6-210ENST00000635747 ATRNL1Q5VV63 1379 aa22.29■■□□□ 1.16
CLN6-210ENST00000635747 PHF20L1A8MW92 1017 aa22.29■■□□□ 1.16
CLN6-210ENST00000635747 TBC1D12O60347 775 aa22.29■■□□□ 1.16
CLN6-210ENST00000635747 CRHR2Q13324 411 aa22.29■■□□□ 1.16
CLN6-210ENST00000635747 C20orf194Q5TEA3 1177 aa22.29■■□□□ 1.16
CLN6-210ENST00000635747 SH3BP5LQ7L8J4 393 aa22.29■■□□□ 1.16
CLN6-210ENST00000635747 CERS3Q8IU89 383 aa22.29■■□□□ 1.16
CLN6-210ENST00000635747 ZFYVE28Q9HCC9 887 aa22.29■■□□□ 1.16
CLN6-210ENST00000635747 IFIT2P09913 472 aaKnown RBP22.28■■□□□ 1.16
CLN6-210ENST00000635747 OSBPL5Q9H0X9 879 aaPredicted RBP22.28■■□□□ 1.16
CLN6-210ENST00000635747 PICK1Q9NRD5 415 aa22.28■■□□□ 1.16
CLN6-210ENST00000635747 AATFQ9NY61 560 aaKnown RBP eCLIP22.28■■□□□ 1.16
CLN6-210ENST00000635747 CTNND1O60716 968 aaKnown RBP22.27■■□□□ 1.16
CLN6-210ENST00000635747 MAP3K12Q12852 859 aa22.27■■□□□ 1.16
CLN6-210ENST00000635747 TTF1Q15361 905 aaPredicted RBP22.27■■□□□ 1.16
CLN6-210ENST00000635747 TAF1CQ15572 869 aaPredicted RBP22.27■■□□□ 1.16
CLN6-210ENST00000635747 SCYL3Q8IZE3 742 aa22.27■■□□□ 1.16
CLN6-210ENST00000635747 ERO1AQ96HE7 468 aa22.27■■□□□ 1.16
CLN6-210ENST00000635747 DHX36Q9H2U1 1008 aaKnown RBP22.27■■□□□ 1.16
CLN6-210ENST00000635747 PIH1D3Q9NQM4 214 aaKnown RBP22.27■■□□□ 1.16
CLN6-210ENST00000635747 KCNH4Q9UQ05 1017 aa22.27■■□□□ 1.16
CLN6-210ENST00000635747 COL2A1P02458 1487 aaPredicted RBP22.27■■□□□ 1.16
CLN6-210ENST00000635747 APBB1O00213 710 aa22.26■■□□□ 1.15
CLN6-210ENST00000635747 CXCL11O14625 94 aa22.26■■□□□ 1.15
CLN6-210ENST00000635747 IDH1O75874 414 aaKnown RBP22.26■■□□□ 1.15
CLN6-210ENST00000635747 FAM43AQ8N2R8 423 aa22.26■■□□□ 1.15
CLN6-210ENST00000635747 SH3RF3Q8TEJ3 882 aaPredicted RBP22.26■■□□□ 1.15
CLN6-210ENST00000635747 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.26■■□□□ 1.15
CLN6-210ENST00000635747 BTBD19C9JJ37 291 aa22.25■■□□□ 1.15
CLN6-210ENST00000635747 CYP7A1P22680 504 aa22.25■■□□□ 1.15
CLN6-210ENST00000635747 SP3Q02447 781 aa22.25■■□□□ 1.15
CLN6-210ENST00000635747 ARHGEF6Q15052 776 aa22.25■■□□□ 1.15
CLN6-210ENST00000635747 FBXO46Q6PJ61 603 aaPredicted RBP22.25■■□□□ 1.15
CLN6-210ENST00000635747 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.25■■□□□ 1.15
CLN6-210ENST00000635747 PI4KBQ9UBF8 816 aa22.24■■□□□ 1.15
CLN6-210ENST00000635747 HERC5Q9UII4 1024 aaKnown RBP22.24■■□□□ 1.15
CLN6-210ENST00000635747 PTPRAP18433 802 aa22.23■■□□□ 1.15
CLN6-210ENST00000635747 ANKRD23Q86SG2 305 aa22.23■■□□□ 1.15
CLN6-210ENST00000635747 TGFBRAP1Q8WUH2 860 aa22.23■■□□□ 1.15
CLN6-210ENST00000635747 ZHX2Q9Y6X8 837 aa22.23■■□□□ 1.15
CLN6-210ENST00000635747 ADGRA1Q86SQ6 560 aa22.22■■□□□ 1.15
CLN6-210ENST00000635747 MAGEB6Q8N7X4 407 aa22.22■■□□□ 1.15
CLN6-210ENST00000635747 LRRCC1Q9C099 1032 aa22.22■■□□□ 1.15
CLN6-210ENST00000635747 TRIM17Q9Y577 477 aa22.22■■□□□ 1.15
CLN6-210ENST00000635747 DOCK2Q92608 1830 aa22.22■■□□□ 1.15
CLN6-210ENST00000635747 MAST2Q6P0Q8 1798 aa22.21■■□□□ 1.15
CLN6-210ENST00000635747 TLR2O60603 784 aa22.21■■□□□ 1.15
CLN6-210ENST00000635747 FASTKD5Q7L8L6 764 aaKnown RBP22.21■■□□□ 1.15
CLN6-210ENST00000635747 TBC1D2Q9BYX2 928 aa22.21■■□□□ 1.15
CLN6-210ENST00000635747 ANTXR1Q9H6X2 564 aa22.21■■□□□ 1.15
CLN6-210ENST00000635747 HPS5Q9UPZ3 1129 aa22.21■■□□□ 1.15
CLN6-210ENST00000635747 RGS19P49795 217 aa22.2■■□□□ 1.14
CLN6-210ENST00000635747 OTOP1Q7RTM1 612 aa22.2■■□□□ 1.14
CLN6-210ENST00000635747 FOXP4Q8IVH2 680 aaPredicted RBP22.2■■□□□ 1.14
CLN6-210ENST00000635747 EFCC1Q9HA90 598 aa22.2■■□□□ 1.14
CLN6-210ENST00000635747 AFG3L2Q9Y4W6 797 aa22.2■■□□□ 1.14
CLN6-210ENST00000635747 NDUFB9Q9Y6M9 179 aa22.2■■□□□ 1.14
CLN6-210ENST00000635747 FLT1P17948 1338 aa22.2■■□□□ 1.14
CLN6-210ENST00000635747 PDHXO00330 501 aa22.19■■□□□ 1.14
CLN6-210ENST00000635747 MAPKAPK5Q8IW41 473 aa22.19■■□□□ 1.14
CLN6-210ENST00000635747 CD99L2Q8TCZ2 262 aa22.19■■□□□ 1.14
CLN6-210ENST00000635747 BCL11AQ9H165 835 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms