RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.35■■□□□ 1.65
SF1-221ENST00000633899 WNK4Q96J92 1243 aa25.35■■□□□ 1.65
SF1-221ENST00000633899 CSRNP1Q96S65 589 aa25.35■■□□□ 1.65
SF1-221ENST00000633899 ELP3Q9H9T3 547 aa25.35■■□□□ 1.65
SF1-221ENST00000633899 ZBTB48P10074 688 aaPredicted RBP25.34■■□□□ 1.65
SF1-221ENST00000633899 SREBF2Q12772 1141 aa25.34■■□□□ 1.65
SF1-221ENST00000633899 ZFPM1Q8IX07 1006 aa25.34■■□□□ 1.65
SF1-221ENST00000633899 SH3RF3Q8TEJ3 882 aaPredicted RBP25.34■■□□□ 1.65
SF1-221ENST00000633899 DDX4Q9NQI0 724 aaKnown RBP25.34■■□□□ 1.65
SF1-221ENST00000633899 MYH7P12883 1935 aa25.33■■□□□ 1.65
SF1-221ENST00000633899 FOCADQ5VW36 1801 aa25.33■■□□□ 1.65
SF1-221ENST00000633899 LBX1P52954 281 aa25.33■■□□□ 1.65
SF1-221ENST00000633899 VGLL4Q14135 290 aa25.33■■□□□ 1.65
SF1-221ENST00000633899 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.33■■□□□ 1.65
SF1-221ENST00000633899 ADGRA1Q86SQ6 560 aa25.33■■□□□ 1.65
SF1-221ENST00000633899 CERS3Q8IU89 383 aa25.33■■□□□ 1.65
SF1-221ENST00000633899 EXOC6Q8TAG9 804 aa25.33■■□□□ 1.65
SF1-221ENST00000633899 ECHDC1Q9NTX5 307 aa25.33■■□□□ 1.65
SF1-221ENST00000633899 PAG1Q9NWQ8 432 aa25.33■■□□□ 1.65
SF1-221ENST00000633899 NPM3O75607 178 aaKnown RBP25.32■■□□□ 1.64
SF1-221ENST00000633899 HSPA8P11142 646 aaKnown RBP25.32■■□□□ 1.64
SF1-221ENST00000633899 PPP4CP60510 307 aa25.32■■□□□ 1.64
SF1-221ENST00000633899 GCC1Q96CN9 775 aa25.32■■□□□ 1.64
SF1-221ENST00000633899 HAUS7Q99871 368 aa25.32■■□□□ 1.64
SF1-221ENST00000633899 TSKSQ9UJT2 592 aa25.32■■□□□ 1.64
SF1-221ENST00000633899 MANSC4A6NHS7 340 aaPredicted RBP25.31■■□□□ 1.64
SF1-221ENST00000633899 HDAC1Q13547 482 aaPredicted RBP25.31■■□□□ 1.64
SF1-221ENST00000633899 MIGA1Q8NAN2 632 aa25.31■■□□□ 1.64
SF1-221ENST00000633899 OPTNQ96CV9 577 aa25.31■■□□□ 1.64
SF1-221ENST00000633899 SLC9C2Q5TAH2 1124 aa25.3■■□□□ 1.64
SF1-221ENST00000633899 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.3■■□□□ 1.64
SF1-221ENST00000633899 OSBPL5Q9H0X9 879 aaPredicted RBP25.3■■□□□ 1.64
SF1-221ENST00000633899 PRDM10Q9NQV6 1147 aa25.3■■□□□ 1.64
SF1-221ENST00000633899 SAGE1Q9NXZ1 904 aa25.3■■□□□ 1.64
SF1-221ENST00000633899 LAMB1P07942 1786 aa25.3■■□□□ 1.64
SF1-221ENST00000633899 DDTLA6NHG4 134 aaPredicted RBP25.29■■□□□ 1.64
SF1-221ENST00000633899 SH3BP5LQ7L8J4 393 aa25.29■■□□□ 1.64
SF1-221ENST00000633899 TGFBRAP1Q8WUH2 860 aa25.29■■□□□ 1.64
SF1-221ENST00000633899 ZKSCAN4Q969J2 545 aaPredicted RBP25.29■■□□□ 1.64
SF1-221ENST00000633899 EDC3Q96F86 508 aaKnown RBP25.29■■□□□ 1.64
SF1-221ENST00000633899 RWDD1Q9H446 243 aaPredicted RBP25.29■■□□□ 1.64
SF1-221ENST00000633899 RNF186Q9NXI6 227 aa25.29■■□□□ 1.64
SF1-221ENST00000633899 ATRNL1Q5VV63 1379 aa25.29■■□□□ 1.64
SF1-221ENST00000633899 COL2A1P02458 1487 aaPredicted RBP25.28■■□□□ 1.64
SF1-221ENST00000633899 TRPA1O75762 1119 aa25.28■■□□□ 1.64
SF1-221ENST00000633899 PDE6AP16499 860 aa25.28■■□□□ 1.64
SF1-221ENST00000633899 DYNLL1P63167 89 aaKnown RBP25.28■■□□□ 1.64
SF1-221ENST00000633899 ANKRD45Q5TZF3 282 aa25.28■■□□□ 1.64
SF1-221ENST00000633899 MYH1P12882 1939 aa25.27■■□□□ 1.64
SF1-221ENST00000633899 USP5P45974 858 aa25.27■■□□□ 1.64
SF1-221ENST00000633899 TM4SF4P48230 202 aa25.27■■□□□ 1.64
SF1-221ENST00000633899 INHBEP58166 350 aa25.27■■□□□ 1.64
SF1-221ENST00000633899 MAPKAPK5Q8IW41 473 aa25.27■■□□□ 1.64
SF1-221ENST00000633899 OTUD5Q96G74 571 aa25.27■■□□□ 1.64
SF1-221ENST00000633899 SNCAIPQ9Y6H5 919 aa25.27■■□□□ 1.64
SF1-221ENST00000633899 MAGEB6P1A0A0J9YX57 407 aa25.26■■□□□ 1.63
SF1-221ENST00000633899 INPP5BP32019 993 aa25.26■■□□□ 1.63
SF1-221ENST00000633899 ERO1BQ86YB8 467 aa25.26■■□□□ 1.63
SF1-221ENST00000633899 ZNF112Q9UJU3 913 aa25.26■■□□□ 1.63
SF1-221ENST00000633899 FLT1P17948 1338 aa25.26■■□□□ 1.63
SF1-221ENST00000633899 ZNF532Q9HCE3 1301 aa25.26■■□□□ 1.63
SF1-221ENST00000633899 SPDYE5A6NIY4 337 aa25.25■■□□□ 1.63
SF1-221ENST00000633899 ERC2O15083 957 aa25.25■■□□□ 1.63
SF1-221ENST00000633899 GJA5P36382 358 aa25.25■■□□□ 1.63
SF1-221ENST00000633899 COL13A1Q5TAT6 717 aaPredicted RBP25.25■■□□□ 1.63
SF1-221ENST00000633899 TSHZ3Q63HK5 1081 aa25.25■■□□□ 1.63
SF1-221ENST00000633899 ZSCAN25Q6NSZ9 544 aa25.25■■□□□ 1.63
SF1-221ENST00000633899 CNKSR2Q8WXI2 1034 aa25.25■■□□□ 1.63
SF1-221ENST00000633899 DHX36Q9H2U1 1008 aaKnown RBP25.25■■□□□ 1.63
SF1-221ENST00000633899 TTC41PQ6P2S7 1318 aa25.25■■□□□ 1.63
SF1-221ENST00000633899 DOCK1Q14185 1865 aa25.24■■□□□ 1.63
SF1-221ENST00000633899 IRX6P78412 446 aaPredicted RBP25.24■■□□□ 1.63
SF1-221ENST00000633899 TRIM34Q9BYJ4 488 aa25.24■■□□□ 1.63
SF1-221ENST00000633899 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.24■■□□□ 1.63
SF1-221ENST00000633899 NAV1Q8NEY1 1877 aa25.23■■□□□ 1.63
SF1-221ENST00000633899 GTF2A2P52657 109 aa25.23■■□□□ 1.63
SF1-221ENST00000633899 OTUD7BQ6GQQ9 843 aa25.23■■□□□ 1.63
SF1-221ENST00000633899 PICK1Q9NRD5 415 aa25.23■■□□□ 1.63
SF1-221ENST00000633899 PI4KBQ9UBF8 816 aa25.23■■□□□ 1.63
SF1-221ENST00000633899 CASP8AP2Q9UKL3 1982 aa25.23■■□□□ 1.63
SF1-221ENST00000633899 TBC1D12O60347 775 aa25.22■■□□□ 1.63
SF1-221ENST00000633899 ALDH1A1P00352 501 aa25.22■■□□□ 1.63
SF1-221ENST00000633899 HLA-DOAP06340 250 aa25.22■■□□□ 1.63
SF1-221ENST00000633899 MX1P20591 662 aa25.22■■□□□ 1.63
SF1-221ENST00000633899 ADD2P35612 726 aa25.22■■□□□ 1.63
SF1-221ENST00000633899 NOL9Q5SY16 702 aaKnown RBP25.22■■□□□ 1.63
SF1-221ENST00000633899 CRNKL1Q9BZJ0 848 aaKnown RBP25.22■■□□□ 1.63
SF1-221ENST00000633899 SAP30BPQ9UHR5 308 aaKnown RBP25.22■■□□□ 1.63
SF1-221ENST00000633899 ATAD5Q96QE3 1844 aa25.21■■□□□ 1.63
SF1-221ENST00000633899 MAP3K10Q02779 954 aa25.21■■□□□ 1.63
SF1-221ENST00000633899 PPATQ06203 517 aa25.21■■□□□ 1.63
SF1-221ENST00000633899 PPIL2Q13356 520 aa25.21■■□□□ 1.63
SF1-221ENST00000633899 IFNL1Q8IU54 200 aa25.21■■□□□ 1.63
SF1-221ENST00000633899 SCYL3Q8IZE3 742 aa25.21■■□□□ 1.63
SF1-221ENST00000633899 CRACR2BQ8N4Y2 399 aaPredicted RBP25.21■■□□□ 1.63
SF1-221ENST00000633899 CCL15-CCL14A0A0B4J2E2 113 aa25.2■■□□□ 1.62
SF1-221ENST00000633899 TCRBV5S4A2TA0A5A2 114 aa25.2■■□□□ 1.62
SF1-221ENST00000633899 GLRX3O76003 335 aaKnown RBP25.2■■□□□ 1.62
SF1-221ENST00000633899 CCL15Q16663 113 aa25.2■■□□□ 1.62
SF1-221ENST00000633899 OTUD7AQ8TE49 926 aaPredicted RBP25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms