RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 NCAPH2Q6IBW4 605 aa13.15□□□□□ -0.3
SHPRH-211ENST00000629427 ERCC5P28715 1186 aaPredicted RBP13.15□□□□□ -0.3
SHPRH-211ENST00000629427 PIK3AP1Q6ZUJ8 805 aa13.15□□□□□ -0.3
SHPRH-211ENST00000629427 FNBP4Q8N3X1 1017 aaPredicted RBP13.15□□□□□ -0.3
SHPRH-211ENST00000629427 PLCD1P51178 756 aa13.15□□□□□ -0.3
SHPRH-211ENST00000629427 PPP2R5CQ13362 524 aa13.15□□□□□ -0.3
SHPRH-211ENST00000629427 KRT24Q2M2I5 525 aa13.15□□□□□ -0.3
SHPRH-211ENST00000629427 MAPK8IP1Q9UQF2 711 aa13.15□□□□□ -0.3
SHPRH-211ENST00000629427 SYCP2Q9BX26 1530 aa13.15□□□□□ -0.3
SHPRH-211ENST00000629427 ELP1O95163 1332 aa13.15□□□□□ -0.3
SHPRH-211ENST00000629427 M0QZ92 97 aa13.15□□□□□ -0.3
SHPRH-211ENST00000629427 VAV2P52735 878 aa13.15□□□□□ -0.3
SHPRH-211ENST00000629427 HAUS3Q68CZ6 603 aa13.15□□□□□ -0.3
SHPRH-211ENST00000629427 KRT222Q8N1A0 295 aa13.15□□□□□ -0.3
SHPRH-211ENST00000629427 CCDC26Q8TAB7 109 aa13.15□□□□□ -0.3
SHPRH-211ENST00000629427 MRRFQ96E11 262 aaKnown RBP13.15□□□□□ -0.31
SHPRH-211ENST00000629427 POLKQ9UBT6 870 aa13.15□□□□□ -0.31
SHPRH-211ENST00000629427 MKRN1Q9UHC7 482 aaKnown RBP13.15□□□□□ -0.31
SHPRH-211ENST00000629427 TXKP42681 527 aa13.14□□□□□ -0.31
SHPRH-211ENST00000629427 VPS52Q8N1B4 723 aa13.14□□□□□ -0.31
SHPRH-211ENST00000629427 YTHDC2Q9H6S0 1430 aaKnown RBP13.14□□□□□ -0.31
SHPRH-211ENST00000629427 ZBED4O75132 1171 aa13.14□□□□□ -0.31
SHPRH-211ENST00000629427 STK10O94804 968 aaKnown RBP13.14□□□□□ -0.31
SHPRH-211ENST00000629427 TNNC1P63316 161 aa13.14□□□□□ -0.31
SHPRH-211ENST00000629427 CCDC121Q6ZUS5 278 aa13.14□□□□□ -0.31
SHPRH-211ENST00000629427 GPR161Q8N6U8 529 aaKnown RBP13.14□□□□□ -0.31
SHPRH-211ENST00000629427 PDE8AO60658 829 aa13.14□□□□□ -0.31
SHPRH-211ENST00000629427 CCDC122Q5T0U0 273 aa13.14□□□□□ -0.31
SHPRH-211ENST00000629427 VPS16Q9H269 839 aa13.14□□□□□ -0.31
SHPRH-211ENST00000629427 MAST3O60307 1309 aa13.14□□□□□ -0.31
SHPRH-211ENST00000629427 CCDC24Q8N4L8 307 aa13.14□□□□□ -0.31
SHPRH-211ENST00000629427 WDR66Q8TBY9 1149 aa13.14□□□□□ -0.31
SHPRH-211ENST00000629427 EXOC7Q9UPT5 735 aa13.14□□□□□ -0.31
SHPRH-211ENST00000629427 DKC1O60832 514 aaKnown RBP eCLIP13.13□□□□□ -0.31
SHPRH-211ENST00000629427 ITIH3Q06033 890 aa13.13□□□□□ -0.31
SHPRH-211ENST00000629427 AZI2Q9H6S1 392 aa13.13□□□□□ -0.31
SHPRH-211ENST00000629427 AKR1B15C9JRZ8 316 aaPredicted RBP13.13□□□□□ -0.31
SHPRH-211ENST00000629427 POLR2DO15514 142 aaKnown RBP13.13□□□□□ -0.31
SHPRH-211ENST00000629427 RNASE9P60153 205 aaKnown RBP13.13□□□□□ -0.31
SHPRH-211ENST00000629427 FAM98CQ17RN3 349 aaKnown RBP13.13□□□□□ -0.31
SHPRH-211ENST00000629427 HOXC9P31274 260 aa13.13□□□□□ -0.31
SHPRH-211ENST00000629427 LIN9Q5TKA1 542 aa13.13□□□□□ -0.31
SHPRH-211ENST00000629427 HOOK2Q96ED9 719 aa13.13□□□□□ -0.31
SHPRH-211ENST00000629427 EPSTI1Q96J88 318 aa13.13□□□□□ -0.31
SHPRH-211ENST00000629427 LPXNO60711 386 aa13.13□□□□□ -0.31
SHPRH-211ENST00000629427 ASIC2Q16515 512 aa13.13□□□□□ -0.31
SHPRH-211ENST00000629427 ZNF594Q96JF6 807 aaPredicted RBP13.13□□□□□ -0.31
SHPRH-211ENST00000629427 VPS18Q9P253 973 aa13.13□□□□□ -0.31
SHPRH-211ENST00000629427 GIPC1O14908 333 aa13.13□□□□□ -0.31
SHPRH-211ENST00000629427 TAF5LO75529 589 aa13.13□□□□□ -0.31
SHPRH-211ENST00000629427 KRT19P08727 400 aa13.13□□□□□ -0.31
SHPRH-211ENST00000629427 TSPYL6Q8N831 410 aa13.13□□□□□ -0.31
SHPRH-211ENST00000629427 EYA1Q99502 592 aa13.13□□□□□ -0.31
SHPRH-211ENST00000629427 TBC1D7Q9P0N9 293 aa13.13□□□□□ -0.31
SHPRH-211ENST00000629427 TTLL3Q9Y4R7 772 aa13.13□□□□□ -0.31
SHPRH-211ENST00000629427 TRPM2O94759 1503 aa13.13□□□□□ -0.31
SHPRH-211ENST00000629427 NOL3O60936 208 aaKnown RBP13.12□□□□□ -0.31
SHPRH-211ENST00000629427 DEXIO95424 95 aa13.12□□□□□ -0.31
SHPRH-211ENST00000629427 DNM2P50570 870 aa13.12□□□□□ -0.31
SHPRH-211ENST00000629427 TBC1D8BQ0IIM8 1120 aa13.12□□□□□ -0.31
SHPRH-211ENST00000629427 CNGA4Q8IV77 575 aa13.12□□□□□ -0.31
SHPRH-211ENST00000629427 UTP11Q9Y3A2 253 aaKnown RBP13.12□□□□□ -0.31
SHPRH-211ENST00000629427 GCNT3O95395 438 aa13.12□□□□□ -0.31
SHPRH-211ENST00000629427 IVLP07476 585 aa13.12□□□□□ -0.31
SHPRH-211ENST00000629427 IP6K1Q92551 441 aa13.12□□□□□ -0.31
SHPRH-211ENST00000629427 SOS1Q07889 1333 aaPredicted RBP13.12□□□□□ -0.31
SHPRH-211ENST00000629427 PRIM1P49642 420 aaKnown RBP13.12□□□□□ -0.31
SHPRH-211ENST00000629427 TCIRG1Q13488 830 aa13.12□□□□□ -0.31
SHPRH-211ENST00000629427 PARP10Q53GL7 1025 aa13.12□□□□□ -0.31
SHPRH-211ENST00000629427 PLBD2Q8NHP8 589 aa13.12□□□□□ -0.31
SHPRH-211ENST00000629427 ASXL2Q76L83 1435 aa13.12□□□□□ -0.31
SHPRH-211ENST00000629427 MAP3K1Q13233 1512 aa13.12□□□□□ -0.31
SHPRH-211ENST00000629427 SLC1A4P43007 532 aa13.12□□□□□ -0.31
SHPRH-211ENST00000629427 ZNF790Q6PG37 636 aa13.12□□□□□ -0.31
SHPRH-211ENST00000629427 CCDC125Q86Z20 511 aa13.12□□□□□ -0.31
SHPRH-211ENST00000629427 HSPA1LP34931 641 aa13.12□□□□□ -0.31
SHPRH-211ENST00000629427 MYCT1Q8N699 235 aa13.12□□□□□ -0.31
SHPRH-211ENST00000629427 VWA3BQ502W6 1294 aa13.12□□□□□ -0.31
SHPRH-211ENST00000629427 SMCR8Q8TEV9 937 aaPredicted RBP13.12□□□□□ -0.31
SHPRH-211ENST00000629427 XAGE2Q96GT9 111 aa13.12□□□□□ -0.31
SHPRH-211ENST00000629427 PPP1R2P41236 205 aa13.11□□□□□ -0.31
SHPRH-211ENST00000629427 GSDMBQ8TAX9 411 aa13.11□□□□□ -0.31
SHPRH-211ENST00000629427 BAG1Q99933 345 aaPredicted RBP13.11□□□□□ -0.31
SHPRH-211ENST00000629427 CAPN2P17655 700 aa13.11□□□□□ -0.31
SHPRH-211ENST00000629427 CALCRLQ16602 461 aa13.11□□□□□ -0.31
SHPRH-211ENST00000629427 SYT10Q6XYQ8 523 aa13.11□□□□□ -0.31
SHPRH-211ENST00000629427 NIM1KQ8IY84 436 aa13.11□□□□□ -0.31
SHPRH-211ENST00000629427 NSMCE1Q8WV22 266 aa13.11□□□□□ -0.31
SHPRH-211ENST00000629427 V9GY48 417 aaPredicted RBP13.11□□□□□ -0.31
SHPRH-211ENST00000629427 PRPF6O94906 941 aaKnown RBP13.11□□□□□ -0.31
SHPRH-211ENST00000629427 TUBB4BP68371 445 aa13.11□□□□□ -0.31
SHPRH-211ENST00000629427 SETDB1Q15047 1291 aa13.11□□□□□ -0.31
SHPRH-211ENST00000629427 EP400NLQ6ZTU2 488 aa13.11□□□□□ -0.31
SHPRH-211ENST00000629427 MRPL44Q9H9J2 332 aaKnown RBP13.11□□□□□ -0.31
SHPRH-211ENST00000629427 SAMD15Q9P1V8 674 aa13.11□□□□□ -0.31
SHPRH-211ENST00000629427 ZNF518AQ6AHZ1 1483 aa13.11□□□□□ -0.31
SHPRH-211ENST00000629427 RPS6KB1P23443 525 aa13.11□□□□□ -0.31
SHPRH-211ENST00000629427 ATP5DP30049 168 aa13.11□□□□□ -0.31
SHPRH-211ENST00000629427 CLUL1Q15846 466 aa13.11□□□□□ -0.31
SHPRH-211ENST00000629427 TMEM87BQ96K49 555 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms