RNA–Protein interactions for RNA: ENST00000629136.1

CHD2-217, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-217ENST00000629136 ALDH1A1P00352 501 aa13.23□□□□□ -0.29
CHD2-217ENST00000629136 CYP2E1P05181 493 aaPredicted RBP13.23□□□□□ -0.29
CHD2-217ENST00000629136 INPP5BP32019 993 aa13.23□□□□□ -0.29
CHD2-217ENST00000629136 CCDC158Q5M9N0 1113 aa13.23□□□□□ -0.29
CHD2-217ENST00000629136 SH3BP5LQ7L8J4 393 aa13.23□□□□□ -0.29
CHD2-217ENST00000629136 OTUD5Q96G74 571 aa13.23□□□□□ -0.29
CHD2-217ENST00000629136 ZNF341Q9BYN7 854 aa13.23□□□□□ -0.29
CHD2-217ENST00000629136 SNRKQ9NRH2 765 aa13.23□□□□□ -0.29
CHD2-217ENST00000629136 ZNF112Q9UJU3 913 aa13.23□□□□□ -0.29
CHD2-217ENST00000629136 ZAP70P43403 619 aa13.22□□□□□ -0.29
CHD2-217ENST00000629136 PICALMQ13492 652 aa13.22□□□□□ -0.29
CHD2-217ENST00000629136 ERO1BQ86YB8 467 aa13.22□□□□□ -0.29
CHD2-217ENST00000629136 ERC1Q8IUD2 1116 aa13.22□□□□□ -0.29
CHD2-217ENST00000629136 RPAP2Q8IXW5 612 aaPredicted RBP13.22□□□□□ -0.29
CHD2-217ENST00000629136 RAI14Q9P0K7 980 aa13.22□□□□□ -0.29
CHD2-217ENST00000629136 HTTP42858 3142 aa13.22□□□□□ -0.29
CHD2-217ENST00000629136 MGAMO43451 1857 aa13.21□□□□□ -0.29
CHD2-217ENST00000629136 DDTLA6NHG4 134 aaPredicted RBP13.21□□□□□ -0.29
CHD2-217ENST00000629136 SLURP2P0DP57 97 aa13.21□□□□□ -0.29
CHD2-217ENST00000629136 GSTO1P78417 241 aa13.21□□□□□ -0.29
CHD2-217ENST00000629136 PDE3AQ14432 1141 aa13.21□□□□□ -0.29
CHD2-217ENST00000629136 CTU1Q7Z7A3 348 aaKnown RBP13.21□□□□□ -0.29
CHD2-217ENST00000629136 ADGRA1Q86SQ6 560 aa13.21□□□□□ -0.29
CHD2-217ENST00000629136 RHPN1Q8TCX5 695 aa13.21□□□□□ -0.29
CHD2-217ENST00000629136 BRI3BPQ8WY22 251 aa13.21□□□□□ -0.29
CHD2-217ENST00000629136 LRP2BPQ9P2M1 347 aa13.21□□□□□ -0.29
CHD2-217ENST00000629136 RBBP6Q7Z6E9 1792 aaKnown RBP13.21□□□□□ -0.29
CHD2-217ENST00000629136 CCL15-CCL14A0A0B4J2E2 113 aa13.2□□□□□ -0.3
CHD2-217ENST00000629136 IRF6O14896 467 aa13.2□□□□□ -0.3
CHD2-217ENST00000629136 LDHCP07864 332 aa13.2□□□□□ -0.3
CHD2-217ENST00000629136 GTF2A2P52657 109 aa13.2□□□□□ -0.3
CHD2-217ENST00000629136 CRHR2Q13324 411 aa13.2□□□□□ -0.3
CHD2-217ENST00000629136 PPIL2Q13356 520 aa13.2□□□□□ -0.3
CHD2-217ENST00000629136 CCL15Q16663 113 aa13.2□□□□□ -0.3
CHD2-217ENST00000629136 NOL9Q5SY16 702 aaKnown RBP13.2□□□□□ -0.3
CHD2-217ENST00000629136 AACSQ86V21 672 aa13.2□□□□□ -0.3
CHD2-217ENST00000629136 IL1RAPL2Q9NP60 686 aa13.2□□□□□ -0.3
CHD2-217ENST00000629136 PIH1D3Q9NQM4 214 aaKnown RBP13.2□□□□□ -0.3
CHD2-217ENST00000629136 NDUFB9Q9Y6M9 179 aa13.2□□□□□ -0.3
CHD2-217ENST00000629136 MYH8P13535 1937 aa13.19□□□□□ -0.3
CHD2-217ENST00000629136 PHF20L1A8MW92 1017 aa13.19□□□□□ -0.3
CHD2-217ENST00000629136 FKTNO75072 461 aa13.19□□□□□ -0.3
CHD2-217ENST00000629136 NPM3O75607 178 aaKnown RBP13.19□□□□□ -0.3
CHD2-217ENST00000629136 MAP3K10Q02779 954 aa13.19□□□□□ -0.3
CHD2-217ENST00000629136 PPATQ06203 517 aa13.19□□□□□ -0.3
CHD2-217ENST00000629136 HSP90AB4PQ58FF6 505 aa13.19□□□□□ -0.3
CHD2-217ENST00000629136 NAA16Q6N069 864 aaPredicted RBP13.19□□□□□ -0.3
CHD2-217ENST00000629136 FAM43AQ8N2R8 423 aa13.19□□□□□ -0.3
CHD2-217ENST00000629136 OSBPL5Q9H0X9 879 aaPredicted RBP13.19□□□□□ -0.3
CHD2-217ENST00000629136 HMMRO75330 724 aa13.18□□□□□ -0.3
CHD2-217ENST00000629136 MAP4K4O95819 1239 aaPredicted RBP13.18□□□□□ -0.3
CHD2-217ENST00000629136 OTUD7BQ6GQQ9 843 aa13.18□□□□□ -0.3
CHD2-217ENST00000629136 ZSCAN29Q8IWY8 852 aaPredicted RBP13.18□□□□□ -0.3
CHD2-217ENST00000629136 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.18□□□□□ -0.3
CHD2-217ENST00000629136 SH3RF3Q8TEJ3 882 aaPredicted RBP13.18□□□□□ -0.3
CHD2-217ENST00000629136 KIF1BPQ96EK5 621 aa13.18□□□□□ -0.3
CHD2-217ENST00000629136 CHMP4BQ9H444 224 aaKnown RBP13.18□□□□□ -0.3
CHD2-217ENST00000629136 ANTXR1Q9H6X2 564 aa13.18□□□□□ -0.3
CHD2-217ENST00000629136 AATFQ9NY61 560 aaKnown RBP eCLIP13.18□□□□□ -0.3
CHD2-217ENST00000629136 CENPFP49454 3210 aa13.17□□□□□ -0.3
CHD2-217ENST00000629136 CCDC85CA6NKD9 419 aa13.17□□□□□ -0.3
CHD2-217ENST00000629136 APBB1O00213 710 aa13.17□□□□□ -0.3
CHD2-217ENST00000629136 IGSF3O75054 1194 aa13.17□□□□□ -0.3
CHD2-217ENST00000629136 SNAPC2Q13487 334 aa13.17□□□□□ -0.3
CHD2-217ENST00000629136 TEX11Q8IYF3 940 aa13.17□□□□□ -0.3
CHD2-217ENST00000629136 KCNH4Q9UQ05 1017 aa13.17□□□□□ -0.3
CHD2-217ENST00000629136 FLT1P17948 1338 aa13.16□□□□□ -0.3
CHD2-217ENST00000629136 BAZ2AQ9UIF9 1905 aaKnown RBP13.16□□□□□ -0.3
CHD2-217ENST00000629136 FAM196BA6NMK8 535 aa13.16□□□□□ -0.3
CHD2-217ENST00000629136 BTBD19C9JJ37 291 aa13.16□□□□□ -0.3
CHD2-217ENST00000629136 CETPP11597 493 aa13.16□□□□□ -0.3
CHD2-217ENST00000629136 PPP4CP60510 307 aa13.16□□□□□ -0.3
CHD2-217ENST00000629136 CAP1Q01518 475 aa13.16□□□□□ -0.3
CHD2-217ENST00000629136 MOGSQ13724 837 aa13.16□□□□□ -0.3
CHD2-217ENST00000629136 TAF1CQ15572 869 aaPredicted RBP13.16□□□□□ -0.3
CHD2-217ENST00000629136 SCYL3Q8IZE3 742 aa13.16□□□□□ -0.3
CHD2-217ENST00000629136 CLASRPQ8N2M8 674 aaKnown RBP13.16□□□□□ -0.3
CHD2-217ENST00000629136 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.16□□□□□ -0.3
CHD2-217ENST00000629136 TNRC18O15417 2968 aaPredicted RBP13.16□□□□□ -0.3
CHD2-217ENST00000629136 TBC1D12O60347 775 aa13.15□□□□□ -0.3
CHD2-217ENST00000629136 RAB11FIP3O75154 756 aa13.15□□□□□ -0.3
CHD2-217ENST00000629136 IDH1O75874 414 aaKnown RBP13.15□□□□□ -0.3
CHD2-217ENST00000629136 BAG3O95817 575 aa13.15□□□□□ -0.3
CHD2-217ENST00000629136 DYNLL1P63167 89 aaKnown RBP13.15□□□□□ -0.3
CHD2-217ENST00000629136 PKN2Q16513 984 aaKnown RBP13.15□□□□□ -0.3
CHD2-217ENST00000629136 CD99L2Q8TCZ2 262 aa13.15□□□□□ -0.3
CHD2-217ENST00000629136 NOL10Q9BSC4 688 aaKnown RBP13.15□□□□□ -0.3
CHD2-217ENST00000629136 ZCCHC17Q9NP64 241 aaKnown RBP13.15□□□□□ -0.3
CHD2-217ENST00000629136 HPS5Q9UPZ3 1129 aa13.15□□□□□ -0.3
CHD2-217ENST00000629136 BRCA2P51587 3418 aa13.14□□□□□ -0.31
CHD2-217ENST00000629136 CTNND1O60716 968 aaKnown RBP13.14□□□□□ -0.31
CHD2-217ENST00000629136 PLCG2P16885 1265 aa13.14□□□□□ -0.31
CHD2-217ENST00000629136 PTPRAP18433 802 aa13.14□□□□□ -0.31
CHD2-217ENST00000629136 FBXO46Q6PJ61 603 aaPredicted RBP13.14□□□□□ -0.31
CHD2-217ENST00000629136 OTOP1Q7RTM1 612 aa13.14□□□□□ -0.31
CHD2-217ENST00000629136 MAPKAPK5Q8IW41 473 aa13.14□□□□□ -0.31
CHD2-217ENST00000629136 MAGEB6Q8N7X4 407 aa13.14□□□□□ -0.31
CHD2-217ENST00000629136 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.14□□□□□ -0.31
CHD2-217ENST00000629136 TGFBRAP1Q8WUH2 860 aa13.14□□□□□ -0.31
CHD2-217ENST00000629136 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms