RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 SCO2A0A1W2PP80 73 aa4.26□□□□□ -1.73
SCARNA4-201ENST00000629045 TRIM37O94972 964 aa4.26□□□□□ -1.73
SCARNA4-201ENST00000629045 F13BP05160 661 aa4.26□□□□□ -1.73
SCARNA4-201ENST00000629045 NTF4P34130 210 aa4.26□□□□□ -1.73
SCARNA4-201ENST00000629045 CDK5R2Q13319 367 aa4.26□□□□□ -1.73
SCARNA4-201ENST00000629045 LRRC14Q15048 493 aa4.26□□□□□ -1.73
SCARNA4-201ENST00000629045 TAF1CQ15572 869 aaPredicted RBP4.26□□□□□ -1.73
SCARNA4-201ENST00000629045 ZNF326Q5BKZ1 582 aaKnown RBP4.26□□□□□ -1.73
SCARNA4-201ENST00000629045 ZC3H12AQ5D1E8 599 aaKnown RBP4.26□□□□□ -1.73
SCARNA4-201ENST00000629045 LRFN4Q6PJG9 635 aa4.26□□□□□ -1.73
SCARNA4-201ENST00000629045 UBE3DQ7Z6J8 389 aa4.26□□□□□ -1.73
SCARNA4-201ENST00000629045 ZDHHC13Q8IUH4 622 aa4.26□□□□□ -1.73
SCARNA4-201ENST00000629045 YIPF2Q9BWQ6 316 aa4.26□□□□□ -1.73
SCARNA4-201ENST00000629045 ATXN3LQ9H3M9 355 aa4.26□□□□□ -1.73
SCARNA4-201ENST00000629045 PRKAG2Q9UGJ0 569 aa4.26□□□□□ -1.73
SCARNA4-201ENST00000629045 TLR6Q9Y2C9 796 aa4.26□□□□□ -1.73
SCARNA4-201ENST00000629045 SYNGAP1Q96PV0 1343 aa4.25□□□□□ -1.73
SCARNA4-201ENST00000629045 PRAMEF27A3QJZ7 478 aa4.25□□□□□ -1.73
SCARNA4-201ENST00000629045 FAM170BA6NMN3 283 aa4.25□□□□□ -1.73
SCARNA4-201ENST00000629045 WDR64B1ANS9 1081 aa4.25□□□□□ -1.73
SCARNA4-201ENST00000629045 GSC2O15499 205 aa4.25□□□□□ -1.73
SCARNA4-201ENST00000629045 RNGTTO60942 597 aaKnown RBP4.25□□□□□ -1.73
SCARNA4-201ENST00000629045 ST13P50502 369 aaKnown RBP4.25□□□□□ -1.73
SCARNA4-201ENST00000629045 MRPL58Q14197 206 aaKnown RBP4.25□□□□□ -1.73
SCARNA4-201ENST00000629045 INPP5AQ14642 412 aa4.25□□□□□ -1.73
SCARNA4-201ENST00000629045 WIPI1Q5MNZ9 446 aaPredicted RBP4.25□□□□□ -1.73
SCARNA4-201ENST00000629045 C12orf40Q86WS4 652 aa4.25□□□□□ -1.73
SCARNA4-201ENST00000629045 SMYD4Q8IYR2 804 aaPredicted RBP4.25□□□□□ -1.73
SCARNA4-201ENST00000629045 GATA6Q92908 595 aa4.25□□□□□ -1.73
SCARNA4-201ENST00000629045 ISL2Q96A47 359 aa4.25□□□□□ -1.73
SCARNA4-201ENST00000629045 PLPPR2Q96GM1 343 aa4.25□□□□□ -1.73
SCARNA4-201ENST00000629045 TBC1D32Q96NH3 1257 aa4.25□□□□□ -1.73
SCARNA4-201ENST00000629045 CYP8B1Q9UNU6 501 aa4.25□□□□□ -1.73
SCARNA4-201ENST00000629045 USP31Q70CQ4 1352 aa4.25□□□□□ -1.73
SCARNA4-201ENST00000629045 TFE3P19532 575 aaPredicted RBP4.24□□□□□ -1.73
SCARNA4-201ENST00000629045 LMNB1P20700 586 aa4.24□□□□□ -1.73
SCARNA4-201ENST00000629045 ERVK-24P63145 666 aa4.24□□□□□ -1.73
SCARNA4-201ENST00000629045 HNRNPUQ00839 825 aaKnown RBP eCLIP4.24□□□□□ -1.73
SCARNA4-201ENST00000629045 MAP7Q14244 749 aa4.24□□□□□ -1.73
SCARNA4-201ENST00000629045 SEZ6L2Q6UXD5 910 aa4.24□□□□□ -1.73
SCARNA4-201ENST00000629045 AGMOQ6ZNB7 445 aa4.24□□□□□ -1.73
SCARNA4-201ENST00000629045 ZNF765Q7L2R6 523 aa4.24□□□□□ -1.73
SCARNA4-201ENST00000629045 ZAR1Q86SH2 424 aa4.24□□□□□ -1.73
SCARNA4-201ENST00000629045 PHC3Q8NDX5 983 aa4.24□□□□□ -1.73
SCARNA4-201ENST00000629045 ELMO3Q96BJ8 720 aa4.24□□□□□ -1.73
SCARNA4-201ENST00000629045 NOC4LQ9BVI4 516 aaKnown RBP4.24□□□□□ -1.73
SCARNA4-201ENST00000629045 PICK1Q9NRD5 415 aa4.24□□□□□ -1.73
SCARNA4-201ENST00000629045 C1GALT1Q9NS00 363 aa4.24□□□□□ -1.73
SCARNA4-201ENST00000629045 PRR19A6NJB7 356 aa4.23□□□□□ -1.73
SCARNA4-201ENST00000629045 MED26O95402 600 aa4.23□□□□□ -1.73
SCARNA4-201ENST00000629045 HOXA10P31260 410 aaPredicted RBP4.23□□□□□ -1.73
SCARNA4-201ENST00000629045 SSTR4P31391 388 aa4.23□□□□□ -1.73
SCARNA4-201ENST00000629045 RPS26P62854 115 aaKnown RBP4.23□□□□□ -1.73
SCARNA4-201ENST00000629045 ZBTB37Q5TC79 503 aa4.23□□□□□ -1.73
SCARNA4-201ENST00000629045 Q8N3U1 123 aa4.23□□□□□ -1.73
SCARNA4-201ENST00000629045 RNF214Q8ND24 703 aa4.23□□□□□ -1.73
SCARNA4-201ENST00000629045 OSBPL1AQ9BXW6 950 aa4.23□□□□□ -1.73
SCARNA4-201ENST00000629045 MIR1-1HGQ9H1L0 117 aa4.23□□□□□ -1.73
SCARNA4-201ENST00000629045 SSU72Q9NP77 194 aaKnown RBP4.23□□□□□ -1.73
SCARNA4-201ENST00000629045 COPRSQ9NQ92 184 aa4.23□□□□□ -1.73
SCARNA4-201ENST00000629045 KBTBD4Q9NVX7 518 aa4.23□□□□□ -1.73
SCARNA4-201ENST00000629045 RNF112Q9ULX5 631 aa4.23□□□□□ -1.73
SCARNA4-201ENST00000629045 LOC100996750A0A140TA64 210 aa4.22□□□□□ -1.73
SCARNA4-201ENST00000629045 RBM47A0AV96 593 aaKnown RBP4.22□□□□□ -1.73
SCARNA4-201ENST00000629045 LEFTY1O75610 366 aa4.22□□□□□ -1.73
SCARNA4-201ENST00000629045 FAM87AP0C7U9 286 aa4.22□□□□□ -1.73
SCARNA4-201ENST00000629045 FAM160A1Q05DH4 1040 aa4.22□□□□□ -1.73
SCARNA4-201ENST00000629045 RING1Q06587 406 aa4.22□□□□□ -1.73
SCARNA4-201ENST00000629045 LRP8Q14114 963 aa4.22□□□□□ -1.73
SCARNA4-201ENST00000629045 LDLRAD1Q5T700 205 aa4.22□□□□□ -1.73
SCARNA4-201ENST00000629045 BNC2Q6ZN30 1099 aaPredicted RBP4.22□□□□□ -1.73
SCARNA4-201ENST00000629045 JARID2Q92833 1246 aaPredicted RBP4.22□□□□□ -1.73
SCARNA4-201ENST00000629045 RHOVQ96L33 236 aa4.22□□□□□ -1.73
SCARNA4-201ENST00000629045 KRTAP4-6Q9BYQ5 205 aa4.22□□□□□ -1.73
SCARNA4-201ENST00000629045 FBRSQ9HAH7 460 aa4.22□□□□□ -1.73
SCARNA4-201ENST00000629045 MINDY4BA8MYZ0 360 aa4.21□□□□□ -1.74
SCARNA4-201ENST00000629045 RBAK-RBAKDNI3L0D1 243 aa4.21□□□□□ -1.74
SCARNA4-201ENST00000629045 F13A1P00488 732 aa4.21□□□□□ -1.74
SCARNA4-201ENST00000629045 PF4P02776 101 aa4.21□□□□□ -1.74
SCARNA4-201ENST00000629045 GBP2P32456 591 aaPredicted RBP4.21□□□□□ -1.74
SCARNA4-201ENST00000629045 CD97P48960 835 aa4.21□□□□□ -1.74
SCARNA4-201ENST00000629045 CAMK2GQ13555 558 aaPredicted RBP4.21□□□□□ -1.74
SCARNA4-201ENST00000629045 TSNAXIP1Q2TAA8 658 aa4.21□□□□□ -1.74
SCARNA4-201ENST00000629045 ARTNQ5T4W7 220 aa4.21□□□□□ -1.74
SCARNA4-201ENST00000629045 CYFIP1Q7L576 1253 aa4.21□□□□□ -1.74
SCARNA4-201ENST00000629045 ERMP1Q7Z2K6 904 aa4.21□□□□□ -1.74
SCARNA4-201ENST00000629045 HDXQ7Z353 690 aa4.21□□□□□ -1.74
SCARNA4-201ENST00000629045 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.21□□□□□ -1.74
SCARNA4-201ENST00000629045 TOP6BLQ8N6T0 577 aa4.21□□□□□ -1.74
SCARNA4-201ENST00000629045 LRRC4CQ9HCJ2 640 aa4.21□□□□□ -1.74
SCARNA4-201ENST00000629045 ATG3Q9NT62 314 aa4.21□□□□□ -1.74
SCARNA4-201ENST00000629045 PIM2Q9P1W9 311 aa4.21□□□□□ -1.74
SCARNA4-201ENST00000629045 U3KQE9 123 aa4.21□□□□□ -1.74
SCARNA4-201ENST00000629045 FANCGO15287 622 aa4.2□□□□□ -1.74
SCARNA4-201ENST00000629045 HYAL3O43820 417 aaPredicted RBP4.2□□□□□ -1.74
SCARNA4-201ENST00000629045 RECKO95980 971 aa4.2□□□□□ -1.74
SCARNA4-201ENST00000629045 RLBP1P12271 317 aa4.2□□□□□ -1.74
SCARNA4-201ENST00000629045 ETF1P62495 437 aaKnown RBP4.2□□□□□ -1.74
SCARNA4-201ENST00000629045 NKG7Q16617 165 aa4.2□□□□□ -1.74
SCARNA4-201ENST00000629045 SNAP47Q5SQN1 464 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms