RNA–Protein interactions for RNA: ENST00000628606.1

CHRNA4-211, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 183 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-211ENST00000628606 NOM1Q5C9Z4 860 aaKnown RBP19.44■□□□□ 0.7
CHRNA4-211ENST00000628606 C20orf194Q5TEA3 1177 aa19.44■□□□□ 0.7
CHRNA4-211ENST00000628606 CFHR5Q9BXR6 569 aa19.44■□□□□ 0.7
CHRNA4-211ENST00000628606 CCL15-CCL14A0A0B4J2E2 113 aa19.43■□□□□ 0.7
CHRNA4-211ENST00000628606 WDHD1O75717 1129 aaPredicted RBP19.43■□□□□ 0.7
CHRNA4-211ENST00000628606 IFIT2P09913 472 aaKnown RBP19.43■□□□□ 0.7
CHRNA4-211ENST00000628606 CCL15Q16663 113 aa19.43■□□□□ 0.7
CHRNA4-211ENST00000628606 CTU1Q7Z7A3 348 aaKnown RBP19.43■□□□□ 0.7
CHRNA4-211ENST00000628606 ZFPM1Q8IX07 1006 aa19.43■□□□□ 0.7
CHRNA4-211ENST00000628606 ZNF296Q8WUU4 475 aaPredicted RBP19.43■□□□□ 0.7
CHRNA4-211ENST00000628606 CNKSR2Q8WXI2 1034 aa19.43■□□□□ 0.7
CHRNA4-211ENST00000628606 YTHDC1Q96MU7 727 aaKnown RBP19.43■□□□□ 0.7
CHRNA4-211ENST00000628606 SNCAIPQ9Y6H5 919 aa19.43■□□□□ 0.7
CHRNA4-211ENST00000628606 TESPA1A2RU30 521 aaPredicted RBP19.42■□□□□ 0.7
CHRNA4-211ENST00000628606 IGF2BP3O00425 579 aaKnown RBP eCLIP19.42■□□□□ 0.7
CHRNA4-211ENST00000628606 FKTNO75072 461 aa19.42■□□□□ 0.7
CHRNA4-211ENST00000628606 NPM3O75607 178 aaKnown RBP19.42■□□□□ 0.7
CHRNA4-211ENST00000628606 CETPP11597 493 aa19.42■□□□□ 0.7
CHRNA4-211ENST00000628606 INPP5BP32019 993 aa19.42■□□□□ 0.7
CHRNA4-211ENST00000628606 RHBDL3P58872 404 aa19.42■□□□□ 0.7
CHRNA4-211ENST00000628606 SIRT2Q8IXJ6 389 aa19.42■□□□□ 0.7
CHRNA4-211ENST00000628606 TEX11Q8IYF3 940 aa19.42■□□□□ 0.7
CHRNA4-211ENST00000628606 ZNF384Q8TF68 577 aa19.42■□□□□ 0.7
CHRNA4-211ENST00000628606 ZNF112Q9UJU3 913 aa19.42■□□□□ 0.7
CHRNA4-211ENST00000628606 CCDC85CA6NKD9 419 aa19.41■□□□□ 0.7
CHRNA4-211ENST00000628606 IDH1O75874 414 aaKnown RBP19.41■□□□□ 0.7
CHRNA4-211ENST00000628606 PPATQ06203 517 aa19.41■□□□□ 0.7
CHRNA4-211ENST00000628606 PPIL2Q13356 520 aa19.41■□□□□ 0.7
CHRNA4-211ENST00000628606 SNAPC2Q13487 334 aa19.41■□□□□ 0.7
CHRNA4-211ENST00000628606 MS4A4AQ96JQ5 239 aa19.41■□□□□ 0.7
CHRNA4-211ENST00000628606 DDX4Q9NQI0 724 aaKnown RBP19.41■□□□□ 0.7
CHRNA4-211ENST00000628606 AATFQ9NY61 560 aaKnown RBP eCLIP19.41■□□□□ 0.7
CHRNA4-211ENST00000628606 LAMB1P07942 1786 aa19.4■□□□□ 0.7
CHRNA4-211ENST00000628606 DOCK2Q92608 1830 aa19.4■□□□□ 0.7
CHRNA4-211ENST00000628606 DDTLA6NHG4 134 aaPredicted RBP19.4■□□□□ 0.7
CHRNA4-211ENST00000628606 PICK1Q9NRD5 415 aa19.4■□□□□ 0.7
CHRNA4-211ENST00000628606 IRF6O14896 467 aa19.39■□□□□ 0.69
CHRNA4-211ENST00000628606 MAP3K12Q12852 859 aa19.39■□□□□ 0.69
CHRNA4-211ENST00000628606 TTF1Q15361 905 aaPredicted RBP19.39■□□□□ 0.69
CHRNA4-211ENST00000628606 PKN2Q16513 984 aaKnown RBP19.39■□□□□ 0.69
CHRNA4-211ENST00000628606 BRI3BPQ8WY22 251 aa19.39■□□□□ 0.69
CHRNA4-211ENST00000628606 PTPN18Q99952 460 aa19.39■□□□□ 0.69
CHRNA4-211ENST00000628606 PIH1D3Q9NQM4 214 aaKnown RBP19.39■□□□□ 0.69
CHRNA4-211ENST00000628606 RFX7Q2KHR2 1363 aa19.39■□□□□ 0.69
CHRNA4-211ENST00000628606 CYP7A1P22680 504 aa19.38■□□□□ 0.69
CHRNA4-211ENST00000628606 CRHR2Q13324 411 aa19.38■□□□□ 0.69
CHRNA4-211ENST00000628606 TAF1CQ15572 869 aaPredicted RBP19.38■□□□□ 0.69
CHRNA4-211ENST00000628606 NOL9Q5SY16 702 aaKnown RBP19.38■□□□□ 0.69
CHRNA4-211ENST00000628606 MAST2Q6P0Q8 1798 aa19.38■□□□□ 0.69
CHRNA4-211ENST00000628606 TMED8Q6PL24 325 aaPredicted RBP19.38■□□□□ 0.69
CHRNA4-211ENST00000628606 SH3BP5LQ7L8J4 393 aa19.38■□□□□ 0.69
CHRNA4-211ENST00000628606 CERS3Q8IU89 383 aa19.38■□□□□ 0.69
CHRNA4-211ENST00000628606 SH3RF3Q8TEJ3 882 aaPredicted RBP19.38■□□□□ 0.69
CHRNA4-211ENST00000628606 OSBPL5Q9H0X9 879 aaPredicted RBP19.38■□□□□ 0.69
CHRNA4-211ENST00000628606 R3HDMLQ9H3Y0 253 aa19.38■□□□□ 0.69
CHRNA4-211ENST00000628606 ZFYVE28Q9HCC9 887 aa19.38■□□□□ 0.69
CHRNA4-211ENST00000628606 MYO5AQ9Y4I1 1855 aaKnown RBP19.37■□□□□ 0.69
CHRNA4-211ENST00000628606 PPP4CP60510 307 aa19.37■□□□□ 0.69
CHRNA4-211ENST00000628606 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.37■□□□□ 0.69
CHRNA4-211ENST00000628606 ATRNL1Q5VV63 1379 aa19.36■□□□□ 0.69
CHRNA4-211ENST00000628606 TBC1D12O60347 775 aa19.36■□□□□ 0.69
CHRNA4-211ENST00000628606 CTNND1O60716 968 aaKnown RBP19.36■□□□□ 0.69
CHRNA4-211ENST00000628606 MAP3K10Q02779 954 aa19.36■□□□□ 0.69
CHRNA4-211ENST00000628606 SCYL3Q8IZE3 742 aa19.36■□□□□ 0.69
CHRNA4-211ENST00000628606 MAGEB6Q8N7X4 407 aa19.36■□□□□ 0.69
CHRNA4-211ENST00000628606 TGFBRAP1Q8WUH2 860 aa19.36■□□□□ 0.69
CHRNA4-211ENST00000628606 LRRCC1Q9C099 1032 aa19.36■□□□□ 0.69
CHRNA4-211ENST00000628606 DHX36Q9H2U1 1008 aaKnown RBP19.36■□□□□ 0.69
CHRNA4-211ENST00000628606 NDUFB9Q9Y6M9 179 aa19.36■□□□□ 0.69
CHRNA4-211ENST00000628606 PHF20L1A8MW92 1017 aa19.35■□□□□ 0.69
CHRNA4-211ENST00000628606 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.35■□□□□ 0.69
CHRNA4-211ENST00000628606 ERO1AQ96HE7 468 aa19.35■□□□□ 0.69
CHRNA4-211ENST00000628606 DNAJC2Q99543 621 aaKnown RBP19.35■□□□□ 0.69
CHRNA4-211ENST00000628606 TRIM34Q9BYJ4 488 aa19.35■□□□□ 0.69
CHRNA4-211ENST00000628606 ZCCHC17Q9NP64 241 aaKnown RBP19.35■□□□□ 0.69
CHRNA4-211ENST00000628606 SP3Q02447 781 aa19.34■□□□□ 0.69
CHRNA4-211ENST00000628606 ARHGEF6Q15052 776 aa19.34■□□□□ 0.69
CHRNA4-211ENST00000628606 ADGRA1Q86SQ6 560 aa19.34■□□□□ 0.69
CHRNA4-211ENST00000628606 MAPKAPK5Q8IW41 473 aa19.34■□□□□ 0.69
CHRNA4-211ENST00000628606 FAM43AQ8N2R8 423 aa19.34■□□□□ 0.69
CHRNA4-211ENST00000628606 ANTXR1Q9H6X2 564 aa19.34■□□□□ 0.69
CHRNA4-211ENST00000628606 PI4KBQ9UBF8 816 aa19.34■□□□□ 0.69
CHRNA4-211ENST00000628606 HERC5Q9UII4 1024 aaKnown RBP19.34■□□□□ 0.69
CHRNA4-211ENST00000628606 ZHX2Q9Y6X8 837 aa19.34■□□□□ 0.69
CHRNA4-211ENST00000628606 COL2A1P02458 1487 aaPredicted RBP19.34■□□□□ 0.69
CHRNA4-211ENST00000628606 BTBD19C9JJ37 291 aa19.33■□□□□ 0.68
CHRNA4-211ENST00000628606 CXCL11O14625 94 aa19.33■□□□□ 0.68
CHRNA4-211ENST00000628606 PTPRAP18433 802 aa19.33■□□□□ 0.68
CHRNA4-211ENST00000628606 USP5P45974 858 aa19.33■□□□□ 0.68
CHRNA4-211ENST00000628606 RRP1P56182 461 aaKnown RBP19.33■□□□□ 0.68
CHRNA4-211ENST00000628606 KCNH4Q9UQ05 1017 aa19.33■□□□□ 0.68
CHRNA4-211ENST00000628606 GOLIM4O00461 696 aa19.32■□□□□ 0.68
CHRNA4-211ENST00000628606 HLA-DOAP06340 250 aa19.32■□□□□ 0.68
CHRNA4-211ENST00000628606 DYNLL1P63167 89 aaKnown RBP19.32■□□□□ 0.68
CHRNA4-211ENST00000628606 CRACR2BQ8N4Y2 399 aaPredicted RBP19.32■□□□□ 0.68
CHRNA4-211ENST00000628606 MIGA1Q8NAN2 632 aa19.32■□□□□ 0.68
CHRNA4-211ENST00000628606 FLT1P17948 1338 aa19.31■□□□□ 0.68
CHRNA4-211ENST00000628606 SLC9C2Q5TAH2 1124 aa19.31■□□□□ 0.68
CHRNA4-211ENST00000628606 FBXO46Q6PJ61 603 aaPredicted RBP19.31■□□□□ 0.68
CHRNA4-211ENST00000628606 FASTKD5Q7L8L6 764 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms