RNA–Protein interactions for RNA: ENST00000628579.1

TMCO1-209, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5 BASIC

Gene TMCO1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-209ENST00000628579 ENTPD3O75355 529 aa12.86□□□□□ -0.35
TMCO1-209ENST00000628579 ALDH1A1P00352 501 aa12.86□□□□□ -0.35
TMCO1-209ENST00000628579 GSTO1P78417 241 aa12.86□□□□□ -0.35
TMCO1-209ENST00000628579 ADGRA1Q86SQ6 560 aa12.86□□□□□ -0.35
TMCO1-209ENST00000628579 AACSQ86V21 672 aa12.86□□□□□ -0.35
TMCO1-209ENST00000628579 ERC1Q8IUD2 1116 aa12.86□□□□□ -0.35
TMCO1-209ENST00000628579 ZSCAN29Q8IWY8 852 aaPredicted RBP12.86□□□□□ -0.35
TMCO1-209ENST00000628579 RPAP2Q8IXW5 612 aaPredicted RBP12.86□□□□□ -0.35
TMCO1-209ENST00000628579 RHPN1Q8TCX5 695 aa12.86□□□□□ -0.35
TMCO1-209ENST00000628579 ZNF512BQ96KM6 892 aaPredicted RBP12.86□□□□□ -0.35
TMCO1-209ENST00000628579 PIH1D3Q9NQM4 214 aaKnown RBP12.86□□□□□ -0.35
TMCO1-209ENST00000628579 ZNF112Q9UJU3 913 aa12.86□□□□□ -0.35
TMCO1-209ENST00000628579 CCL15-CCL14A0A0B4J2E2 113 aa12.85□□□□□ -0.35
TMCO1-209ENST00000628579 CCDC85CA6NKD9 419 aa12.85□□□□□ -0.35
TMCO1-209ENST00000628579 IRF6O14896 467 aa12.85□□□□□ -0.35
TMCO1-209ENST00000628579 CRHR2Q13324 411 aa12.85□□□□□ -0.35
TMCO1-209ENST00000628579 PDE3AQ14432 1141 aa12.85□□□□□ -0.35
TMCO1-209ENST00000628579 CCL15Q16663 113 aa12.85□□□□□ -0.35
TMCO1-209ENST00000628579 NOM1Q5C9Z4 860 aaKnown RBP12.85□□□□□ -0.35
TMCO1-209ENST00000628579 CTU1Q7Z7A3 348 aaKnown RBP12.85□□□□□ -0.35
TMCO1-209ENST00000628579 ERO1BQ86YB8 467 aa12.85□□□□□ -0.35
TMCO1-209ENST00000628579 BCL11AQ9H165 835 aa12.85□□□□□ -0.35
TMCO1-209ENST00000628579 PHF20L1A8MW92 1017 aa12.84□□□□□ -0.35
TMCO1-209ENST00000628579 LDHCP07864 332 aa12.84□□□□□ -0.35
TMCO1-209ENST00000628579 GTF2A2P52657 109 aa12.84□□□□□ -0.35
TMCO1-209ENST00000628579 HSP90AB4PQ58FF6 505 aa12.84□□□□□ -0.35
TMCO1-209ENST00000628579 NAA16Q6N069 864 aaPredicted RBP12.84□□□□□ -0.35
TMCO1-209ENST00000628579 FAM43AQ8N2R8 423 aa12.84□□□□□ -0.35
TMCO1-209ENST00000628579 SH3RF3Q8TEJ3 882 aaPredicted RBP12.84□□□□□ -0.35
TMCO1-209ENST00000628579 ANTXR1Q9H6X2 564 aa12.84□□□□□ -0.35
TMCO1-209ENST00000628579 HTTP42858 3142 aa12.84□□□□□ -0.35
TMCO1-209ENST00000628579 FAM196BA6NMK8 535 aa12.83□□□□□ -0.36
TMCO1-209ENST00000628579 FKTNO75072 461 aa12.83□□□□□ -0.36
TMCO1-209ENST00000628579 HMMRO75330 724 aa12.83□□□□□ -0.36
TMCO1-209ENST00000628579 PPIL2Q13356 520 aa12.83□□□□□ -0.36
TMCO1-209ENST00000628579 OTUD7BQ6GQQ9 843 aa12.83□□□□□ -0.36
TMCO1-209ENST00000628579 TEX11Q8IYF3 940 aa12.83□□□□□ -0.36
TMCO1-209ENST00000628579 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.83□□□□□ -0.36
TMCO1-209ENST00000628579 AATFQ9NY61 560 aaKnown RBP eCLIP12.83□□□□□ -0.36
TMCO1-209ENST00000628579 BTBD19C9JJ37 291 aa12.82□□□□□ -0.36
TMCO1-209ENST00000628579 IDH1O75874 414 aaKnown RBP12.82□□□□□ -0.36
TMCO1-209ENST00000628579 PPATQ06203 517 aa12.82□□□□□ -0.36
TMCO1-209ENST00000628579 SNAPC2Q13487 334 aa12.82□□□□□ -0.36
TMCO1-209ENST00000628579 NOL9Q5SY16 702 aaKnown RBP12.82□□□□□ -0.36
TMCO1-209ENST00000628579 KIF1BPQ96EK5 621 aa12.82□□□□□ -0.36
TMCO1-209ENST00000628579 YTHDC1Q96MU7 727 aaKnown RBP12.82□□□□□ -0.36
TMCO1-209ENST00000628579 OSBPL5Q9H0X9 879 aaPredicted RBP12.82□□□□□ -0.36
TMCO1-209ENST00000628579 CHMP4BQ9H444 224 aaKnown RBP12.82□□□□□ -0.36
TMCO1-209ENST00000628579 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.82□□□□□ -0.36
TMCO1-209ENST00000628579 CDK5RAP2Q96SN8 1893 aa12.82□□□□□ -0.36
TMCO1-209ENST00000628579 NPM3O75607 178 aaKnown RBP12.81□□□□□ -0.36
TMCO1-209ENST00000628579 CETPP11597 493 aa12.81□□□□□ -0.36
TMCO1-209ENST00000628579 CAP1Q01518 475 aa12.81□□□□□ -0.36
TMCO1-209ENST00000628579 MAP3K10Q02779 954 aa12.81□□□□□ -0.36
TMCO1-209ENST00000628579 TAF1CQ15572 869 aaPredicted RBP12.81□□□□□ -0.36
TMCO1-209ENST00000628579 CLASRPQ8N2M8 674 aaKnown RBP12.81□□□□□ -0.36
TMCO1-209ENST00000628579 NOL10Q9BSC4 688 aaKnown RBP12.81□□□□□ -0.36
TMCO1-209ENST00000628579 SIPA1L1O43166 1804 aa12.81□□□□□ -0.36
TMCO1-209ENST00000628579 DOCK1Q14185 1865 aa12.8□□□□□ -0.36
TMCO1-209ENST00000628579 COL2A1P02458 1487 aaPredicted RBP12.8□□□□□ -0.36
TMCO1-209ENST00000628579 CENPFP49454 3210 aa12.8□□□□□ -0.36
TMCO1-209ENST00000628579 RAB11FIP3O75154 756 aa12.8□□□□□ -0.36
TMCO1-209ENST00000628579 BAG3O95817 575 aa12.8□□□□□ -0.36
TMCO1-209ENST00000628579 MAP4K4O95819 1239 aaPredicted RBP12.8□□□□□ -0.36
TMCO1-209ENST00000628579 IFIT2P09913 472 aaKnown RBP12.8□□□□□ -0.36
TMCO1-209ENST00000628579 PTPRAP18433 802 aa12.8□□□□□ -0.36
TMCO1-209ENST00000628579 CYP7A1P22680 504 aa12.8□□□□□ -0.36
TMCO1-209ENST00000628579 PPP4CP60510 307 aa12.8□□□□□ -0.36
TMCO1-209ENST00000628579 DYNLL1P63167 89 aaKnown RBP12.8□□□□□ -0.36
TMCO1-209ENST00000628579 MAPKAPK5Q8IW41 473 aa12.8□□□□□ -0.36
TMCO1-209ENST00000628579 SCYL3Q8IZE3 742 aa12.8□□□□□ -0.36
TMCO1-209ENST00000628579 MAGEB6Q8N7X4 407 aa12.8□□□□□ -0.36
TMCO1-209ENST00000628579 CD99L2Q8TCZ2 262 aa12.8□□□□□ -0.36
TMCO1-209ENST00000628579 TGFBRAP1Q8WUH2 860 aa12.8□□□□□ -0.36
TMCO1-209ENST00000628579 HPS5Q9UPZ3 1129 aa12.8□□□□□ -0.36
TMCO1-209ENST00000628579 KCNH4Q9UQ05 1017 aa12.8□□□□□ -0.36
TMCO1-209ENST00000628579 FOCADQ5VW36 1801 aa12.8□□□□□ -0.36
TMCO1-209ENST00000628579 PLCG2P16885 1265 aa12.79□□□□□ -0.36
TMCO1-209ENST00000628579 MOGSQ13724 837 aa12.79□□□□□ -0.36
TMCO1-209ENST00000628579 CCDC84Q86UT8 332 aaPredicted RBP12.79□□□□□ -0.36
TMCO1-209ENST00000628579 MIGA1Q8NAN2 632 aa12.79□□□□□ -0.36
TMCO1-209ENST00000628579 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.79□□□□□ -0.36
TMCO1-209ENST00000628579 PICK1Q9NRD5 415 aa12.79□□□□□ -0.36
TMCO1-209ENST00000628579 ZHX2Q9Y6X8 837 aa12.79□□□□□ -0.36
TMCO1-209ENST00000628579 FLT1P17948 1338 aa12.79□□□□□ -0.36
TMCO1-209ENST00000628579 PHIPQ8WWQ0 1821 aa12.78□□□□□ -0.36
TMCO1-209ENST00000628579 SMARCA5O60264 1052 aaPredicted RBP12.78□□□□□ -0.36
TMCO1-209ENST00000628579 TBC1D12O60347 775 aa12.78□□□□□ -0.36
TMCO1-209ENST00000628579 CTNND1O60716 968 aaKnown RBP12.78□□□□□ -0.36
TMCO1-209ENST00000628579 SP3Q02447 781 aa12.78□□□□□ -0.36
TMCO1-209ENST00000628579 RRP1BQ14684 758 aaKnown RBP12.78□□□□□ -0.36
TMCO1-209ENST00000628579 PKN2Q16513 984 aaKnown RBP12.78□□□□□ -0.36
TMCO1-209ENST00000628579 OTOP1Q7RTM1 612 aa12.78□□□□□ -0.36
TMCO1-209ENST00000628579 EDC3Q96F86 508 aaKnown RBP12.78□□□□□ -0.36
TMCO1-209ENST00000628579 DNAJC2Q99543 621 aaKnown RBP12.78□□□□□ -0.36
TMCO1-209ENST00000628579 ZFYVE28Q9HCC9 887 aa12.78□□□□□ -0.36
TMCO1-209ENST00000628579 SAP30BPQ9UHR5 308 aaKnown RBP12.78□□□□□ -0.36
TMCO1-209ENST00000628579 PALD1Q9ULE6 856 aa12.78□□□□□ -0.36
TMCO1-209ENST00000628579 TRIM17Q9Y577 477 aa12.78□□□□□ -0.36
TMCO1-209ENST00000628579 ZSWIM8A7E2V4 1837 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms