RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 ANTXR1Q9H6X2 564 aa9.42□□□□□ -0.9
NR1I3-235ENST00000628566 NDUFB9Q9Y6M9 179 aa9.42□□□□□ -0.9
NR1I3-235ENST00000628566 ZNF532Q9HCE3 1301 aa9.41□□□□□ -0.9
NR1I3-235ENST00000628566 DOCK2Q92608 1830 aa9.41□□□□□ -0.9
NR1I3-235ENST00000628566 UBE2Q2LH0YL09 131 aa9.41□□□□□ -0.9
NR1I3-235ENST00000628566 WDHD1O75717 1129 aaPredicted RBP9.41□□□□□ -0.9
NR1I3-235ENST00000628566 ADD2P35612 726 aa9.41□□□□□ -0.9
NR1I3-235ENST00000628566 VEGFBP49765 207 aa9.41□□□□□ -0.9
NR1I3-235ENST00000628566 RHBDL3P58872 404 aa9.41□□□□□ -0.9
NR1I3-235ENST00000628566 UBE3CQ15386 1083 aa9.41□□□□□ -0.9
NR1I3-235ENST00000628566 MAP3K11Q16584 847 aa9.41□□□□□ -0.9
NR1I3-235ENST00000628566 CYP4F22Q6NT55 531 aa9.41□□□□□ -0.9
NR1I3-235ENST00000628566 TICAM2Q86XR7 235 aa9.41□□□□□ -0.9
NR1I3-235ENST00000628566 DNAJC5GQ8N7S2 189 aa9.41□□□□□ -0.9
NR1I3-235ENST00000628566 EVI5LQ96CN4 794 aa9.41□□□□□ -0.9
NR1I3-235ENST00000628566 SLC10A4Q96EP9 437 aa9.41□□□□□ -0.9
NR1I3-235ENST00000628566 FSD1Q9BTV5 496 aa9.41□□□□□ -0.9
NR1I3-235ENST00000628566 STAP2Q9UGK3 403 aa9.41□□□□□ -0.9
NR1I3-235ENST00000628566 COL2A1P02458 1487 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-235ENST00000628566 TRIM6-TRIM34B2RNG4 842 aa9.4□□□□□ -0.9
NR1I3-235ENST00000628566 PDE1AP54750 535 aa9.4□□□□□ -0.9
NR1I3-235ENST00000628566 MAP3K9P80192 1104 aa9.4□□□□□ -0.9
NR1I3-235ENST00000628566 NFIAQ12857 509 aa9.4□□□□□ -0.9
NR1I3-235ENST00000628566 DLK2Q6UY11 383 aa9.4□□□□□ -0.9
NR1I3-235ENST00000628566 CENPQQ7L2Z9 268 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-235ENST00000628566 TTC6Q86TZ1 520 aa9.4□□□□□ -0.9
NR1I3-235ENST00000628566 CRACR2BQ8N4Y2 399 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-235ENST00000628566 MIGA1Q8NAN2 632 aa9.4□□□□□ -0.9
NR1I3-235ENST00000628566 SH3RF3Q8TEJ3 882 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-235ENST00000628566 ZNF384Q8TF68 577 aa9.4□□□□□ -0.9
NR1I3-235ENST00000628566 TGFBRAP1Q8WUH2 860 aa9.4□□□□□ -0.9
NR1I3-235ENST00000628566 CCDC136Q96JN2 1154 aa9.4□□□□□ -0.9
NR1I3-235ENST00000628566 TEPSINQ96N21 525 aa9.4□□□□□ -0.9
NR1I3-235ENST00000628566 OSBPL5Q9H0X9 879 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-235ENST00000628566 PI4KBQ9UBF8 816 aa9.4□□□□□ -0.9
NR1I3-235ENST00000628566 FAM198AQ9UFP1 575 aa9.4□□□□□ -0.9
NR1I3-235ENST00000628566 HERC5Q9UII4 1024 aaKnown RBP9.4□□□□□ -0.9
NR1I3-235ENST00000628566 AK9Q5TCS8 1911 aa9.4□□□□□ -0.9
NR1I3-235ENST00000628566 ATRNL1Q5VV63 1379 aa9.39□□□□□ -0.91
NR1I3-235ENST00000628566 RNF113AO15541 343 aaKnown RBP9.39□□□□□ -0.91
NR1I3-235ENST00000628566 CA12O43570 354 aa9.39□□□□□ -0.91
NR1I3-235ENST00000628566 USP2O75604 605 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-235ENST00000628566 SLC10A3P09131 477 aa9.39□□□□□ -0.91
NR1I3-235ENST00000628566 ZBTB48P10074 688 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-235ENST00000628566 GNAT2P19087 354 aa9.39□□□□□ -0.91
NR1I3-235ENST00000628566 INHBEP58166 350 aa9.39□□□□□ -0.91
NR1I3-235ENST00000628566 SREBF2Q12772 1141 aa9.39□□□□□ -0.91
NR1I3-235ENST00000628566 LDLRAD1Q5T700 205 aa9.39□□□□□ -0.91
NR1I3-235ENST00000628566 ERICH6BQ5W0A0 696 aa9.39□□□□□ -0.91
NR1I3-235ENST00000628566 TSHZ3Q63HK5 1081 aa9.39□□□□□ -0.91
NR1I3-235ENST00000628566 MAPKAPK5Q8IW41 473 aa9.39□□□□□ -0.91
NR1I3-235ENST00000628566 JMYQ8N9B5 988 aa9.39□□□□□ -0.91
NR1I3-235ENST00000628566 PI4K2BQ8TCG2 481 aa9.39□□□□□ -0.91
NR1I3-235ENST00000628566 APPBP2Q92624 585 aa9.39□□□□□ -0.91
NR1I3-235ENST00000628566 EDC3Q96F86 508 aaKnown RBP9.39□□□□□ -0.91
NR1I3-235ENST00000628566 WRNIP1Q96S55 665 aa9.39□□□□□ -0.91
NR1I3-235ENST00000628566 TAOK2Q9UL54 1235 aa9.39□□□□□ -0.91
NR1I3-235ENST00000628566 RFX7Q2KHR2 1363 aa9.38□□□□□ -0.91
NR1I3-235ENST00000628566 FLT1P17948 1338 aa9.38□□□□□ -0.91
NR1I3-235ENST00000628566 TCRBV5S4A2TA0A5A2 114 aa9.38□□□□□ -0.91
NR1I3-235ENST00000628566 HIP1O00291 1037 aa9.38□□□□□ -0.91
NR1I3-235ENST00000628566 TBC1D12O60347 775 aa9.38□□□□□ -0.91
NR1I3-235ENST00000628566 POLR3DP05423 398 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-235ENST00000628566 MFAP1P55081 439 aaKnown RBP9.38□□□□□ -0.91
NR1I3-235ENST00000628566 DYNLL1P63167 89 aaKnown RBP9.38□□□□□ -0.91
NR1I3-235ENST00000628566 OTUD7BQ6GQQ9 843 aa9.38□□□□□ -0.91
NR1I3-235ENST00000628566 ADGRA1Q86SQ6 560 aa9.38□□□□□ -0.91
NR1I3-235ENST00000628566 RASAL3Q86YV0 1011 aa9.38□□□□□ -0.91
NR1I3-235ENST00000628566 FOXP4Q8IVH2 680 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-235ENST00000628566 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.38□□□□□ -0.91
NR1I3-235ENST00000628566 OTUD7AQ8TE49 926 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-235ENST00000628566 RILPL2Q969X0 211 aa9.38□□□□□ -0.91
NR1I3-235ENST00000628566 RIOK1Q9BRS2 568 aaKnown RBP9.38□□□□□ -0.91
NR1I3-235ENST00000628566 NACAP1Q9BZK3 213 aa9.38□□□□□ -0.91
NR1I3-235ENST00000628566 OSBPL3Q9H4L5 887 aa9.38□□□□□ -0.91
NR1I3-235ENST00000628566 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.38□□□□□ -0.91
NR1I3-235ENST00000628566 DDX4Q9NQI0 724 aaKnown RBP9.38□□□□□ -0.91
NR1I3-235ENST00000628566 PICK1Q9NRD5 415 aa9.38□□□□□ -0.91
NR1I3-235ENST00000628566 ATP8A2Q9NTI2 1148 aa9.38□□□□□ -0.91
NR1I3-235ENST00000628566 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-235ENST00000628566 SSC5DA1L4H1 1573 aa9.37□□□□□ -0.91
NR1I3-235ENST00000628566 SALL3Q9BXA9 1300 aa9.37□□□□□ -0.91
NR1I3-235ENST00000628566 MANSC4A6NHS7 340 aaPredicted RBP9.37□□□□□ -0.91
NR1I3-235ENST00000628566 MBD4O95243 580 aa9.37□□□□□ -0.91
NR1I3-235ENST00000628566 MOB2Q70IA6 237 aa9.37□□□□□ -0.91
NR1I3-235ENST00000628566 MIGA2Q7L4E1 593 aa9.37□□□□□ -0.91
NR1I3-235ENST00000628566 PLEKHM2Q8IWE5 1019 aa9.37□□□□□ -0.91
NR1I3-235ENST00000628566 TBC1D2Q9BYX2 928 aa9.37□□□□□ -0.91
NR1I3-235ENST00000628566 MCM9Q9NXL9 1143 aa9.37□□□□□ -0.91
NR1I3-235ENST00000628566 MYH7P12883 1935 aa9.37□□□□□ -0.91
NR1I3-235ENST00000628566 MYO5AQ9Y4I1 1855 aaKnown RBP9.36□□□□□ -0.91
NR1I3-235ENST00000628566 DDTLA6NHG4 134 aaPredicted RBP9.36□□□□□ -0.91
NR1I3-235ENST00000628566 CTNND1O60716 968 aaKnown RBP9.36□□□□□ -0.91
NR1I3-235ENST00000628566 AOC2O75106 756 aa9.36□□□□□ -0.91
NR1I3-235ENST00000628566 ALDH1A1P00352 501 aa9.36□□□□□ -0.91
NR1I3-235ENST00000628566 APPP05067 770 aa9.36□□□□□ -0.91
NR1I3-235ENST00000628566 KIF23Q02241 960 aaPredicted RBP9.36□□□□□ -0.91
NR1I3-235ENST00000628566 PPATQ06203 517 aa9.36□□□□□ -0.91
NR1I3-235ENST00000628566 VGLL4Q14135 290 aa9.36□□□□□ -0.91
NR1I3-235ENST00000628566 SPRYD7Q5W111 196 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms