RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 ALDH8A1Q9H2A2 487 aaPredicted RBP12□□□□□ -0.49
FOXCUT-201ENST00000628509 SH2B1Q9NRF2 756 aaPredicted RBP12□□□□□ -0.49
FOXCUT-201ENST00000628509 JAG2Q9Y219 1238 aa12□□□□□ -0.49
FOXCUT-201ENST00000628509 GSG1L2A8MUP6 293 aa11.99□□□□□ -0.49
FOXCUT-201ENST00000628509 POLR3DP05423 398 aaPredicted RBP11.99□□□□□ -0.49
FOXCUT-201ENST00000628509 HLA-DOAP06340 250 aa11.99□□□□□ -0.49
FOXCUT-201ENST00000628509 CRKP46108 304 aa11.99□□□□□ -0.49
FOXCUT-201ENST00000628509 AKNAD1Q5T1N1 836 aa11.99□□□□□ -0.49
FOXCUT-201ENST00000628509 ESR2Q92731 530 aa11.99□□□□□ -0.49
FOXCUT-201ENST00000628509 DHX36Q9H2U1 1008 aaKnown RBP11.99□□□□□ -0.49
FOXCUT-201ENST00000628509 ANAPC4Q9UJX5 808 aa11.99□□□□□ -0.49
FOXCUT-201ENST00000628509 LAMA4Q16363 1823 aa11.98□□□□□ -0.49
FOXCUT-201ENST00000628509 E7EWF7 191 aa11.98□□□□□ -0.49
FOXCUT-201ENST00000628509 F8W031 263 aaPredicted RBP11.98□□□□□ -0.49
FOXCUT-201ENST00000628509 USP17L8P0C7I0 530 aa11.98□□□□□ -0.49
FOXCUT-201ENST00000628509 RPS6KB1P23443 525 aa11.98□□□□□ -0.49
FOXCUT-201ENST00000628509 PPARAQ07869 468 aa11.98□□□□□ -0.49
FOXCUT-201ENST00000628509 DLGAP5Q15398 846 aa11.98□□□□□ -0.49
FOXCUT-201ENST00000628509 SYNE3Q6ZMZ3 975 aa11.98□□□□□ -0.49
FOXCUT-201ENST00000628509 IQCA1Q86XH1 822 aa11.98□□□□□ -0.49
FOXCUT-201ENST00000628509 KIAA0825Q8IV33 1275 aa11.98□□□□□ -0.49
FOXCUT-201ENST00000628509 STAG1Q8WVM7 1258 aa11.98□□□□□ -0.49
FOXCUT-201ENST00000628509 DPF2Q92785 391 aa11.98□□□□□ -0.49
FOXCUT-201ENST00000628509 TMEM87BQ96K49 555 aa11.98□□□□□ -0.49
FOXCUT-201ENST00000628509 TRIM34Q9BYJ4 488 aa11.98□□□□□ -0.49
FOXCUT-201ENST00000628509 MCM9Q9NXL9 1143 aa11.98□□□□□ -0.49
FOXCUT-201ENST00000628509 LIMCH1Q9UPQ0 1083 aa11.98□□□□□ -0.49
FOXCUT-201ENST00000628509 KIF3AQ9Y496 699 aa11.98□□□□□ -0.49
FOXCUT-201ENST00000628509 ZC3H4Q9UPT8 1303 aaKnown RBP11.97□□□□□ -0.49
FOXCUT-201ENST00000628509 MINDY4BA8MYZ0 360 aa11.97□□□□□ -0.49
FOXCUT-201ENST00000628509 SOCS7O14512 581 aa11.97□□□□□ -0.49
FOXCUT-201ENST00000628509 DHX16O60231 1041 aaKnown RBP11.97□□□□□ -0.49
FOXCUT-201ENST00000628509 TNNI2P48788 182 aa11.97□□□□□ -0.49
FOXCUT-201ENST00000628509 TNFAIP1Q13829 316 aa11.97□□□□□ -0.49
FOXCUT-201ENST00000628509 DIXDC1Q155Q3 683 aa11.97□□□□□ -0.49
FOXCUT-201ENST00000628509 NLGN2Q8NFZ4 835 aa11.97□□□□□ -0.49
FOXCUT-201ENST00000628509 KIF2CQ99661 725 aa11.97□□□□□ -0.49
FOXCUT-201ENST00000628509 CWC22Q9HCG8 908 aaKnown RBP11.97□□□□□ -0.49
FOXCUT-201ENST00000628509 DCP1AQ9NPI6 582 aaPredicted RBP11.97□□□□□ -0.49
FOXCUT-201ENST00000628509 TOMM22Q9NS69 142 aa11.97□□□□□ -0.49
FOXCUT-201ENST00000628509 USP40Q9NVE5 1235 aa11.97□□□□□ -0.49
FOXCUT-201ENST00000628509 DAGLAQ9Y4D2 1042 aa11.97□□□□□ -0.49
FOXCUT-201ENST00000628509 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.97□□□□□ -0.49
FOXCUT-201ENST00000628509 H7C1D1 291 aa11.96□□□□□ -0.49
FOXCUT-201ENST00000628509 FZD9O00144 591 aa11.96□□□□□ -0.49
FOXCUT-201ENST00000628509 NFKBIEO00221 500 aa11.96□□□□□ -0.49
FOXCUT-201ENST00000628509 PSMD14O00487 310 aa11.96□□□□□ -0.49
FOXCUT-201ENST00000628509 RAD17O75943 681 aa11.96□□□□□ -0.49
FOXCUT-201ENST00000628509 DYNLL1P63167 89 aaKnown RBP11.96□□□□□ -0.49
FOXCUT-201ENST00000628509 DPY19L2Q6NUT2 758 aa11.96□□□□□ -0.49
FOXCUT-201ENST00000628509 ADGRA1Q86SQ6 560 aa11.96□□□□□ -0.49
FOXCUT-201ENST00000628509 RASEFQ8IZ41 740 aa11.96□□□□□ -0.49
FOXCUT-201ENST00000628509 FBXL16Q8N461 479 aa11.96□□□□□ -0.49
FOXCUT-201ENST00000628509 MTMR14Q8NCE2 650 aa11.96□□□□□ -0.49
FOXCUT-201ENST00000628509 SDR42E1Q8WUS8 393 aa11.96□□□□□ -0.49
FOXCUT-201ENST00000628509 HOOK2Q96ED9 719 aa11.96□□□□□ -0.49
FOXCUT-201ENST00000628509 UBAC1Q9BSL1 405 aa11.96□□□□□ -0.49
FOXCUT-201ENST00000628509 TBC1D2Q9BYX2 928 aa11.96□□□□□ -0.49
FOXCUT-201ENST00000628509 UPF3BQ9BZI7 483 aaKnown RBP11.96□□□□□ -0.49
FOXCUT-201ENST00000628509 MKNK2Q9HBH9 465 aa11.96□□□□□ -0.49
FOXCUT-201ENST00000628509 SWAP70Q9UH65 585 aa11.96□□□□□ -0.49
FOXCUT-201ENST00000628509 PALD1Q9ULE6 856 aa11.96□□□□□ -0.49
FOXCUT-201ENST00000628509 YDJCA8MPS7 323 aa11.95□□□□□ -0.5
FOXCUT-201ENST00000628509 USP17L12C9JPN9 530 aa11.95□□□□□ -0.5
FOXCUT-201ENST00000628509 USP17L21D6R901 530 aa11.95□□□□□ -0.5
FOXCUT-201ENST00000628509 ENTPD3O75355 529 aa11.95□□□□□ -0.5
FOXCUT-201ENST00000628509 LMOD1P29536 600 aaPredicted RBP11.95□□□□□ -0.5
FOXCUT-201ENST00000628509 SCNN1DP51172 638 aa11.95□□□□□ -0.5
FOXCUT-201ENST00000628509 HAND2P61296 217 aa11.95□□□□□ -0.5
FOXCUT-201ENST00000628509 CXCL9Q07325 125 aa11.95□□□□□ -0.5
FOXCUT-201ENST00000628509 GPR162Q16538 588 aa11.95□□□□□ -0.5
FOXCUT-201ENST00000628509 CFAP100Q494V2 611 aa11.95□□□□□ -0.5
FOXCUT-201ENST00000628509 SLFNL1Q499Z3 407 aa11.95□□□□□ -0.5
FOXCUT-201ENST00000628509 FKBP1CQ5VVH2 108 aa11.95□□□□□ -0.5
FOXCUT-201ENST00000628509 CPLX2Q6PUV4 134 aaKnown RBP11.95□□□□□ -0.5
FOXCUT-201ENST00000628509 ZNF444Q8N0Y2 327 aaPredicted RBP11.95□□□□□ -0.5
FOXCUT-201ENST00000628509 GPC2Q8N158 579 aa11.95□□□□□ -0.5
FOXCUT-201ENST00000628509 CERS5Q8N5B7 392 aa11.95□□□□□ -0.5
FOXCUT-201ENST00000628509 SH3RF3Q8TEJ3 882 aaPredicted RBP11.95□□□□□ -0.5
FOXCUT-201ENST00000628509 TGFBRAP1Q8WUH2 860 aa11.95□□□□□ -0.5
FOXCUT-201ENST00000628509 INTS4Q96HW7 963 aaKnown RBP11.95□□□□□ -0.5
FOXCUT-201ENST00000628509 IDI2Q9BXS1 227 aa11.95□□□□□ -0.5
FOXCUT-201ENST00000628509 DICER1Q9UPY3 1922 aaKnown RBP11.94□□□□□ -0.5
FOXCUT-201ENST00000628509 NAV1Q8NEY1 1877 aa11.94□□□□□ -0.5
FOXCUT-201ENST00000628509 PRKAB2O43741 272 aa11.94□□□□□ -0.5
FOXCUT-201ENST00000628509 CHGBP05060 677 aa11.94□□□□□ -0.5
FOXCUT-201ENST00000628509 PPP2R5BQ15173 497 aa11.94□□□□□ -0.5
FOXCUT-201ENST00000628509 CTR9Q6PD62 1173 aa11.94□□□□□ -0.5
FOXCUT-201ENST00000628509 ZNF384Q8TF68 577 aa11.94□□□□□ -0.5
FOXCUT-201ENST00000628509 EPB41L4AQ9HCS5 686 aaPredicted RBP11.94□□□□□ -0.5
FOXCUT-201ENST00000628509 LAMB1P07942 1786 aa11.94□□□□□ -0.5
FOXCUT-201ENST00000628509 TIAM2Q8IVF5 1701 aa11.94□□□□□ -0.5
FOXCUT-201ENST00000628509 FLT1P17948 1338 aa11.93□□□□□ -0.5
FOXCUT-201ENST00000628509 CCDC196A0A1B0GTZ2 297 aa11.93□□□□□ -0.5
FOXCUT-201ENST00000628509 PRC1O43663 620 aa11.93□□□□□ -0.5
FOXCUT-201ENST00000628509 ORC4O43929 436 aa11.93□□□□□ -0.5
FOXCUT-201ENST00000628509 CALM1P0DP23 149 aa11.93□□□□□ -0.5
FOXCUT-201ENST00000628509 CALM2P0DP24 149 aa11.93□□□□□ -0.5
FOXCUT-201ENST00000628509 CALM3P0DP25 149 aa11.93□□□□□ -0.5
FOXCUT-201ENST00000628509 AK2P54819 239 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms