RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 SLC4A4Q9Y6R1 1079 aa22.62■■□□□ 1.21
MECP2-216ENST00000627864 ENTPD3O75355 529 aa22.61■■□□□ 1.21
MECP2-216ENST00000627864 PRAMEF18Q5VWM3 479 aa22.61■■□□□ 1.21
MECP2-216ENST00000627864 ZFPM1Q8IX07 1006 aa22.61■■□□□ 1.21
MECP2-216ENST00000627864 SDR42E1Q8WUS8 393 aa22.61■■□□□ 1.21
MECP2-216ENST00000627864 FAM151AQ8WW52 585 aa22.61■■□□□ 1.21
MECP2-216ENST00000627864 TMEM39BQ9GZU3 492 aa22.61■■□□□ 1.21
MECP2-216ENST00000627864 TRAF5O00463 557 aa22.6■■□□□ 1.21
MECP2-216ENST00000627864 ITGBL1O95965 494 aaPredicted RBP22.6■■□□□ 1.21
MECP2-216ENST00000627864 RUFY2Q8WXA3 655 aa22.6■■□□□ 1.21
MECP2-216ENST00000627864 PPP2R3BQ9Y5P8 575 aa22.6■■□□□ 1.21
MECP2-216ENST00000627864 CDC45O75419 566 aa22.59■■□□□ 1.21
MECP2-216ENST00000627864 NPM3O75607 178 aaKnown RBP22.59■■□□□ 1.21
MECP2-216ENST00000627864 FMR1Q06787 632 aaKnown RBP eCLIP22.59■■□□□ 1.21
MECP2-216ENST00000627864 ZSCAN29Q8IWY8 852 aaPredicted RBP22.59■■□□□ 1.21
MECP2-216ENST00000627864 FLT1P17948 1338 aa22.58■■□□□ 1.21
MECP2-216ENST00000627864 GNAT2P19087 354 aa22.58■■□□□ 1.21
MECP2-216ENST00000627864 ZNF589Q86UQ0 364 aaPredicted RBP22.58■■□□□ 1.21
MECP2-216ENST00000627864 CDCA5Q96FF9 252 aa22.58■■□□□ 1.21
MECP2-216ENST00000627864 OSBPL5Q9H0X9 879 aaPredicted RBP22.58■■□□□ 1.21
MECP2-216ENST00000627864 SAP30BPQ9UHR5 308 aaKnown RBP22.58■■□□□ 1.21
MECP2-216ENST00000627864 CCDC171Q6TFL3 1326 aa22.57■■□□□ 1.2
MECP2-216ENST00000627864 APPP05067 770 aa22.57■■□□□ 1.2
MECP2-216ENST00000627864 MFAP1P55081 439 aaKnown RBP22.57■■□□□ 1.2
MECP2-216ENST00000627864 FSTL1Q12841 308 aa22.57■■□□□ 1.2
MECP2-216ENST00000627864 NBPF12Q5TAG4 269 aaPredicted RBP22.57■■□□□ 1.2
MECP2-216ENST00000627864 ATP8A2Q9NTI2 1148 aa22.57■■□□□ 1.2
MECP2-216ENST00000627864 DDTLA6NHG4 134 aaPredicted RBP22.56■■□□□ 1.2
MECP2-216ENST00000627864 GSG1L2A8MUP6 293 aa22.56■■□□□ 1.2
MECP2-216ENST00000627864 PATL2C9JE40 543 aaKnown RBP22.56■■□□□ 1.2
MECP2-216ENST00000627864 CASC1Q6TDU7 716 aa22.56■■□□□ 1.2
MECP2-216ENST00000627864 SH3BP5LQ7L8J4 393 aa22.56■■□□□ 1.2
MECP2-216ENST00000627864 CDAN1Q8IWY9 1227 aa22.56■■□□□ 1.2
MECP2-216ENST00000627864 DDRGK1Q96HY6 314 aa22.56■■□□□ 1.2
MECP2-216ENST00000627864 TEPSINQ96N21 525 aa22.56■■□□□ 1.2
MECP2-216ENST00000627864 DCP1AQ9NPI6 582 aaPredicted RBP22.56■■□□□ 1.2
MECP2-216ENST00000627864 DDX60LQ5H9U9 1706 aaKnown RBP22.56■■□□□ 1.2
MECP2-216ENST00000627864 MYH8P13535 1937 aa22.55■■□□□ 1.2
MECP2-216ENST00000627864 SIPA1L1O43166 1804 aa22.55■■□□□ 1.2
MECP2-216ENST00000627864 SLC4A8Q2Y0W8 1093 aa22.55■■□□□ 1.2
MECP2-216ENST00000627864 VPS53Q5VIR6 699 aa22.55■■□□□ 1.2
MECP2-216ENST00000627864 IL25Q9H293 177 aa22.55■■□□□ 1.2
MECP2-216ENST00000627864 ZNF408Q9H9D4 720 aa22.55■■□□□ 1.2
MECP2-216ENST00000627864 MCM9Q9NXL9 1143 aa22.55■■□□□ 1.2
MECP2-216ENST00000627864 MKRN1Q9UHC7 482 aaKnown RBP22.55■■□□□ 1.2
MECP2-216ENST00000627864 PALD1Q9ULE6 856 aa22.55■■□□□ 1.2
MECP2-216ENST00000627864 RAD50Q92878 1312 aa22.55■■□□□ 1.2
MECP2-216ENST00000627864 RPAP1Q9BWH6 1393 aaPredicted RBP22.54■■□□□ 1.2
MECP2-216ENST00000627864 LAMB1P07942 1786 aa22.54■■□□□ 1.2
MECP2-216ENST00000627864 SGSM2O43147 1006 aa22.54■■□□□ 1.2
MECP2-216ENST00000627864 SUPT20HL1Q3ZLR7 823 aa22.54■■□□□ 1.2
MECP2-216ENST00000627864 ESYT1Q9BSJ8 1104 aa22.54■■□□□ 1.2
MECP2-216ENST00000627864 COL2A1P02458 1487 aaPredicted RBP22.54■■□□□ 1.2
MECP2-216ENST00000627864 POLR3DP05423 398 aaPredicted RBP22.53■■□□□ 1.2
MECP2-216ENST00000627864 NF2P35240 595 aa22.53■■□□□ 1.2
MECP2-216ENST00000627864 IFNL3Q8IZI9 196 aa22.53■■□□□ 1.2
MECP2-216ENST00000627864 CSRNP1Q96S65 589 aa22.53■■□□□ 1.2
MECP2-216ENST00000627864 NACAP1Q9BZK3 213 aa22.53■■□□□ 1.2
MECP2-216ENST00000627864 DHX36Q9H2U1 1008 aaKnown RBP22.53■■□□□ 1.2
MECP2-216ENST00000627864 PASKQ96RG2 1323 aa22.53■■□□□ 1.2
MECP2-216ENST00000627864 ATRNL1Q5VV63 1379 aa22.52■■□□□ 1.2
MECP2-216ENST00000627864 HSPD1P10809 573 aaKnown RBP22.52■■□□□ 1.2
MECP2-216ENST00000627864 TDO2P48775 406 aa22.52■■□□□ 1.2
MECP2-216ENST00000627864 GIMAP6Q6P9H5 292 aa22.52■■□□□ 1.2
MECP2-216ENST00000627864 EPB41L4AQ9HCS5 686 aaPredicted RBP22.52■■□□□ 1.2
MECP2-216ENST00000627864 USP17L12C9JPN9 530 aa22.51■■□□□ 1.19
MECP2-216ENST00000627864 USP17L21D6R901 530 aa22.51■■□□□ 1.19
MECP2-216ENST00000627864 FOXP2O15409 715 aa22.51■■□□□ 1.19
MECP2-216ENST00000627864 CELF2O95319 508 aaKnown RBP22.51■■□□□ 1.19
MECP2-216ENST00000627864 HLA-DOAP06340 250 aa22.51■■□□□ 1.19
MECP2-216ENST00000627864 PRKG1Q13976 671 aa22.51■■□□□ 1.19
MECP2-216ENST00000627864 TTC6Q86TZ1 520 aa22.51■■□□□ 1.19
MECP2-216ENST00000627864 HOOK2Q96ED9 719 aa22.51■■□□□ 1.19
MECP2-216ENST00000627864 NAPBQ9H115 298 aa22.51■■□□□ 1.19
MECP2-216ENST00000627864 CYP2D7A0A087X1C5 515 aa22.5■■□□□ 1.19
MECP2-216ENST00000627864 CYP2D6P10635 497 aa22.5■■□□□ 1.19
MECP2-216ENST00000627864 CTR9Q6PD62 1173 aa22.5■■□□□ 1.19
MECP2-216ENST00000627864 MIGA2Q7L4E1 593 aa22.5■■□□□ 1.19
MECP2-216ENST00000627864 AMOTL1Q8IY63 956 aa22.5■■□□□ 1.19
MECP2-216ENST00000627864 PI4KBQ9UBF8 816 aa22.5■■□□□ 1.19
MECP2-216ENST00000627864 SSC5DA1L4H1 1573 aa22.5■■□□□ 1.19
MECP2-216ENST00000627864 MINDY4BA8MYZ0 360 aa22.49■■□□□ 1.19
MECP2-216ENST00000627864 TTLL12Q14166 644 aaPredicted RBP22.49■■□□□ 1.19
MECP2-216ENST00000627864 KIAA1211Q6ZU35 1233 aa22.49■■□□□ 1.19
MECP2-216ENST00000627864 FZD1Q9UP38 647 aa22.49■■□□□ 1.19
MECP2-216ENST00000627864 SLURP2P0DP57 97 aa22.48■■□□□ 1.19
MECP2-216ENST00000627864 PLCD1P51178 756 aa22.48■■□□□ 1.19
MECP2-216ENST00000627864 EVX2Q03828 476 aa22.48■■□□□ 1.19
MECP2-216ENST00000627864 ALX1Q15699 326 aa22.48■■□□□ 1.19
MECP2-216ENST00000627864 C12orf60Q5U649 245 aa22.48■■□□□ 1.19
MECP2-216ENST00000627864 CST9Q5W186 159 aa22.48■■□□□ 1.19
MECP2-216ENST00000627864 DCAF15Q66K64 600 aa22.48■■□□□ 1.19
MECP2-216ENST00000627864 FOXP4Q8IVH2 680 aaPredicted RBP22.48■■□□□ 1.19
MECP2-216ENST00000627864 CRACR2BQ8N4Y2 399 aaPredicted RBP22.48■■□□□ 1.19
MECP2-216ENST00000627864 DSCC1Q9BVC3 393 aa22.48■■□□□ 1.19
MECP2-216ENST00000627864 ARPP21Q9UBL0 812 aaPredicted RBP22.48■■□□□ 1.19
MECP2-216ENST00000627864 LAMA4Q16363 1823 aa22.47■■□□□ 1.19
MECP2-216ENST00000627864 FAM196BA6NMK8 535 aa22.47■■□□□ 1.19
MECP2-216ENST00000627864 PPP1R12BO60237 982 aaPredicted RBP22.47■■□□□ 1.19
MECP2-216ENST00000627864 FGAP02671 866 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms