RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 ZBED3Q96IU2 234 aaPredicted RBP9.64□□□□□ -0.87
TCF4-260ENST00000627685 EYA3Q99504 573 aa9.64□□□□□ -0.87
TCF4-260ENST00000627685 FAM117AQ9C073 453 aa9.64□□□□□ -0.87
TCF4-260ENST00000627685 ADARB2Q9NS39 739 aaKnown RBP9.64□□□□□ -0.87
TCF4-260ENST00000627685 POLR3EQ9NVU0 708 aa9.64□□□□□ -0.87
TCF4-260ENST00000627685 LIMD1Q9UGP4 676 aa9.64□□□□□ -0.87
TCF4-260ENST00000627685 LEMD3Q9Y2U8 911 aa9.64□□□□□ -0.87
TCF4-260ENST00000627685 PAPPA2Q9BXP8 1791 aa9.64□□□□□ -0.87
TCF4-260ENST00000627685 PCNTO95613 3336 aa9.64□□□□□ -0.87
TCF4-260ENST00000627685 CNTNAP1P78357 1384 aa9.63□□□□□ -0.87
TCF4-260ENST00000627685 SSC5DA1L4H1 1573 aa9.63□□□□□ -0.87
TCF4-260ENST00000627685 KIF16BQ96L93 1317 aa9.63□□□□□ -0.87
TCF4-260ENST00000627685 ANKRD18BA2A2Z9 1011 aa9.63□□□□□ -0.87
TCF4-260ENST00000627685 FGFR2P21802 821 aa9.63□□□□□ -0.87
TCF4-260ENST00000627685 LAPTM4AQ15012 233 aa9.63□□□□□ -0.87
TCF4-260ENST00000627685 EAPPQ56P03 285 aaPredicted RBP9.63□□□□□ -0.87
TCF4-260ENST00000627685 Q6ZNB5 142 aa9.63□□□□□ -0.87
TCF4-260ENST00000627685 CNTROBQ8N137 903 aa9.63□□□□□ -0.87
TCF4-260ENST00000627685 ANKIB1Q9P2G1 1089 aa9.63□□□□□ -0.87
TCF4-260ENST00000627685 TMEM88BA6NKF7 163 aa9.62□□□□□ -0.87
TCF4-260ENST00000627685 IL1R1P14778 569 aa9.62□□□□□ -0.87
TCF4-260ENST00000627685 RPS12P25398 132 aaKnown RBP9.62□□□□□ -0.87
TCF4-260ENST00000627685 IGHMBP2P38935 993 aaKnown RBP9.62□□□□□ -0.87
TCF4-260ENST00000627685 IFIT5Q13325 482 aaKnown RBP9.62□□□□□ -0.87
TCF4-260ENST00000627685 MTX1Q13505 466 aa9.62□□□□□ -0.87
TCF4-260ENST00000627685 GRIK5Q16478 980 aa9.62□□□□□ -0.87
TCF4-260ENST00000627685 PODNQ7Z5L7 613 aa9.62□□□□□ -0.87
TCF4-260ENST00000627685 NUDT12Q9BQG2 462 aa9.62□□□□□ -0.87
TCF4-260ENST00000627685 GLIS2Q9BZE0 524 aaPredicted RBP9.62□□□□□ -0.87
TCF4-260ENST00000627685 ZC3H12CQ9C0D7 883 aaKnown RBP9.62□□□□□ -0.87
TCF4-260ENST00000627685 CD209Q9NNX6 404 aa9.62□□□□□ -0.87
TCF4-260ENST00000627685 C9orf78Q9NZ63 289 aaPredicted RBP9.62□□□□□ -0.87
TCF4-260ENST00000627685 CNOT7Q9UIV1 285 aaKnown RBP9.62□□□□□ -0.87
TCF4-260ENST00000627685 PCDHAC2Q9Y5I4 1007 aa9.62□□□□□ -0.87
TCF4-260ENST00000627685 FOXC1Q12948 553 aa9.61□□□□□ -0.87
TCF4-260ENST00000627685 ATF7IPQ6VMQ6 1270 aa9.61□□□□□ -0.87
TCF4-260ENST00000627685 TRIM67Q6ZTA4 783 aa9.61□□□□□ -0.87
TCF4-260ENST00000627685 COA1Q9GZY4 146 aa9.61□□□□□ -0.87
TCF4-260ENST00000627685 LRRFIP2Q9Y608 721 aaKnown RBP9.61□□□□□ -0.87
TCF4-260ENST00000627685 RASSF10A6NK89 507 aa9.6□□□□□ -0.87
TCF4-260ENST00000627685 ADM5C9JUS6 153 aa9.6□□□□□ -0.87
TCF4-260ENST00000627685 TNFRSF10AO00220 468 aa9.6□□□□□ -0.87
TCF4-260ENST00000627685 NRG2O14511 850 aaPredicted RBP9.6□□□□□ -0.87
TCF4-260ENST00000627685 CLK2P49760 499 aaKnown RBP9.6□□□□□ -0.87
TCF4-260ENST00000627685 TBC1D10BQ4KMP7 808 aaPredicted RBP9.6□□□□□ -0.87
TCF4-260ENST00000627685 STRIP1Q5VSL9 837 aa9.6□□□□□ -0.87
TCF4-260ENST00000627685 PRPF38BQ5VTL8 546 aaKnown RBP9.6□□□□□ -0.87
TCF4-260ENST00000627685 LDHAL6AQ6ZMR3 332 aa9.6□□□□□ -0.87
TCF4-260ENST00000627685 TMEM57Q8N5G2 664 aa9.6□□□□□ -0.87
TCF4-260ENST00000627685 AGBL3Q8NEM8 1001 aa9.6□□□□□ -0.87
TCF4-260ENST00000627685 TDRD7Q8NHU6 1098 aaKnown RBP9.6□□□□□ -0.87
TCF4-260ENST00000627685 DDRGK1Q96HY6 314 aa9.6□□□□□ -0.87
TCF4-260ENST00000627685 FAM84BQ96KN1 310 aaPredicted RBP9.6□□□□□ -0.87
TCF4-260ENST00000627685 API5Q9BZZ5 524 aaKnown RBP9.6□□□□□ -0.87
TCF4-260ENST00000627685 ANKRD2Q9GZV1 360 aa9.6□□□□□ -0.87
TCF4-260ENST00000627685 FAM205AQ6ZU69 1335 aa9.59□□□□□ -0.87
TCF4-260ENST00000627685 USP17L3A6NCW0 530 aa9.59□□□□□ -0.87
TCF4-260ENST00000627685 USP17L4A6NCW7 530 aa9.59□□□□□ -0.87
TCF4-260ENST00000627685 H7C1D1 291 aa9.59□□□□□ -0.87
TCF4-260ENST00000627685 CCDC57Q2TAC2 916 aa9.59□□□□□ -0.87
TCF4-260ENST00000627685 KIF4BQ2VIQ3 1234 aa9.59□□□□□ -0.87
TCF4-260ENST00000627685 USP17L1Q7RTZ2 530 aa9.59□□□□□ -0.87
TCF4-260ENST00000627685 FBXO33Q7Z6M2 555 aa9.59□□□□□ -0.87
TCF4-260ENST00000627685 MPHOSPH8Q99549 860 aa9.59□□□□□ -0.87
TCF4-260ENST00000627685 PA2G4Q9UQ80 394 aaKnown RBP9.59□□□□□ -0.87
TCF4-260ENST00000627685 PNMA6EA0A0J9YXQ4 647 aa9.58□□□□□ -0.88
TCF4-260ENST00000627685 CFAP99D6REC4 459 aa9.58□□□□□ -0.88
TCF4-260ENST00000627685 EYA2O00167 538 aa9.58□□□□□ -0.88
TCF4-260ENST00000627685 PDE8BO95263 885 aa9.58□□□□□ -0.88
TCF4-260ENST00000627685 GYG1P46976 350 aa9.58□□□□□ -0.88
TCF4-260ENST00000627685 TRIM32Q13049 653 aa9.58□□□□□ -0.88
TCF4-260ENST00000627685 UBE4AQ14139 1066 aa9.58□□□□□ -0.88
TCF4-260ENST00000627685 QPCTQ16769 361 aa9.58□□□□□ -0.88
TCF4-260ENST00000627685 NBPF9Q3BBW0 867 aa9.58□□□□□ -0.88
TCF4-260ENST00000627685 TSC1Q92574 1164 aa9.58□□□□□ -0.88
TCF4-260ENST00000627685 COPRSQ9NQ92 184 aa9.58□□□□□ -0.88
TCF4-260ENST00000627685 GGA3Q9NZ52 723 aa9.58□□□□□ -0.88
TCF4-260ENST00000627685 CHMP3Q9Y3E7 222 aa9.58□□□□□ -0.88
TCF4-260ENST00000627685 MROH5Q6ZUA9 1318 aa9.57□□□□□ -0.88
TCF4-260ENST00000627685 WNT10BO00744 389 aa9.57□□□□□ -0.88
TCF4-260ENST00000627685 GDF9O60383 454 aa9.57□□□□□ -0.88
TCF4-260ENST00000627685 CCNYL3P0C7X3 344 aa9.57□□□□□ -0.88
TCF4-260ENST00000627685 UBTFL1P0CB47 393 aaPredicted RBP9.57□□□□□ -0.88
TCF4-260ENST00000627685 MMP14P50281 582 aa9.57□□□□□ -0.88
TCF4-260ENST00000627685 FKBP1AP62942 108 aaKnown RBP9.57□□□□□ -0.88
TCF4-260ENST00000627685 GTF2IP78347 998 aa9.57□□□□□ -0.88
TCF4-260ENST00000627685 TUSC1Q2TAM9 212 aa9.57□□□□□ -0.88
TCF4-260ENST00000627685 DESI1Q6ICB0 168 aa9.57□□□□□ -0.88
TCF4-260ENST00000627685 PTCRAQ6ISU1 281 aaPredicted RBP9.57□□□□□ -0.88
TCF4-260ENST00000627685 CDC37L1Q7L3B6 337 aa9.57□□□□□ -0.88
TCF4-260ENST00000627685 CLUAP1Q96AJ1 413 aa9.57□□□□□ -0.88
TCF4-260ENST00000627685 MYOZ2Q9NPC6 264 aa9.57□□□□□ -0.88
TCF4-260ENST00000627685 CNNM1Q9NRU3 951 aa9.57□□□□□ -0.88
TCF4-260ENST00000627685 MKRN1Q9UHC7 482 aaKnown RBP9.57□□□□□ -0.88
TCF4-260ENST00000627685 SCAF8Q9UPN6 1271 aaKnown RBP9.57□□□□□ -0.88
TCF4-260ENST00000627685 JAG2Q9Y219 1238 aa9.57□□□□□ -0.88
TCF4-260ENST00000627685 TLL2Q9Y6L7 1015 aa9.57□□□□□ -0.88
TCF4-260ENST00000627685 TRPM7Q96QT4 1865 aa9.57□□□□□ -0.88
TCF4-260ENST00000627685 PITPNM2Q9BZ72 1349 aa9.56□□□□□ -0.88
TCF4-260ENST00000627685 LAMB1P07942 1786 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms