RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 RHBDL3P58872 404 aa10.21□□□□□ -0.77
SGMS1-211ENST00000626236 PICALMQ13492 652 aa10.21□□□□□ -0.77
SGMS1-211ENST00000626236 EAPPQ56P03 285 aaPredicted RBP10.21□□□□□ -0.77
SGMS1-211ENST00000626236 ZBED3Q96IU2 234 aaPredicted RBP10.21□□□□□ -0.77
SGMS1-211ENST00000626236 STRBPQ96SI9 672 aaKnown RBP10.21□□□□□ -0.77
SGMS1-211ENST00000626236 CRNKL1Q9BZJ0 848 aaKnown RBP10.21□□□□□ -0.77
SGMS1-211ENST00000626236 TAF1DQ9H5J8 278 aaPredicted RBP10.21□□□□□ -0.77
SGMS1-211ENST00000626236 VEZTQ9HBM0 779 aa10.21□□□□□ -0.77
SGMS1-211ENST00000626236 NMRK2Q9NPI5 230 aa10.21□□□□□ -0.77
SGMS1-211ENST00000626236 ZNF70Q9UC06 446 aaPredicted RBP10.21□□□□□ -0.77
SGMS1-211ENST00000626236 SLC4A4Q9Y6R1 1079 aa10.21□□□□□ -0.77
SGMS1-211ENST00000626236 POLR2AP24928 1970 aaKnown RBP10.21□□□□□ -0.78
SGMS1-211ENST00000626236 PRKAB2O43741 272 aa10.2□□□□□ -0.78
SGMS1-211ENST00000626236 ASTN2O75129 1339 aaPredicted RBP10.2□□□□□ -0.78
SGMS1-211ENST00000626236 APPP05067 770 aa10.2□□□□□ -0.78
SGMS1-211ENST00000626236 VEGFAP15692 232 aaPredicted RBP10.2□□□□□ -0.78
SGMS1-211ENST00000626236 GNAT2P19087 354 aa10.2□□□□□ -0.78
SGMS1-211ENST00000626236 USP5P45974 858 aa10.2□□□□□ -0.78
SGMS1-211ENST00000626236 HIRAP54198 1017 aaPredicted RBP10.2□□□□□ -0.78
SGMS1-211ENST00000626236 GSE1Q14687 1217 aa10.2□□□□□ -0.78
SGMS1-211ENST00000626236 LAMA4Q16363 1823 aa10.2□□□□□ -0.78
SGMS1-211ENST00000626236 C8orf34Q49A92 452 aa10.2□□□□□ -0.78
SGMS1-211ENST00000626236 VPS53Q5VIR6 699 aa10.2□□□□□ -0.78
SGMS1-211ENST00000626236 USP50Q70EL3 339 aaPredicted RBP10.2□□□□□ -0.78
SGMS1-211ENST00000626236 TGFBRAP1Q8WUH2 860 aa10.2□□□□□ -0.78
SGMS1-211ENST00000626236 SDR42E1Q8WUS8 393 aa10.2□□□□□ -0.78
SGMS1-211ENST00000626236 ANO2Q9NQ90 1003 aa10.2□□□□□ -0.78
SGMS1-211ENST00000626236 TMOD2Q9NZR1 351 aa10.2□□□□□ -0.78
SGMS1-211ENST00000626236 FLT1P17948 1338 aa10.19□□□□□ -0.78
SGMS1-211ENST00000626236 TCP10L2B9ZVM9 353 aa10.19□□□□□ -0.78
SGMS1-211ENST00000626236 PATL2C9JE40 543 aaKnown RBP10.19□□□□□ -0.78
SGMS1-211ENST00000626236 WDHD1O75717 1129 aaPredicted RBP10.19□□□□□ -0.78
SGMS1-211ENST00000626236 HSPD1P10809 573 aaKnown RBP10.19□□□□□ -0.78
SGMS1-211ENST00000626236 YY1P25490 414 aa10.19□□□□□ -0.78
SGMS1-211ENST00000626236 NFIAQ12857 509 aa10.19□□□□□ -0.78
SGMS1-211ENST00000626236 ANGEL2Q5VTE6 544 aaKnown RBP10.19□□□□□ -0.78
SGMS1-211ENST00000626236 KIAA1211Q6ZU35 1233 aa10.19□□□□□ -0.78
SGMS1-211ENST00000626236 PNMA8AQ86V59 439 aaPredicted RBP10.19□□□□□ -0.78
SGMS1-211ENST00000626236 MAPKAPK5Q8IW41 473 aa10.19□□□□□ -0.78
SGMS1-211ENST00000626236 GGA3Q9NZ52 723 aa10.19□□□□□ -0.78
SGMS1-211ENST00000626236 SCAF8Q9UPN6 1271 aaKnown RBP10.19□□□□□ -0.78
SGMS1-211ENST00000626236 GSG1L2A8MUP6 293 aa10.18□□□□□ -0.78
SGMS1-211ENST00000626236 TDO2P48775 406 aa10.18□□□□□ -0.78
SGMS1-211ENST00000626236 PTH1RQ03431 593 aa10.18□□□□□ -0.78
SGMS1-211ENST00000626236 TCP10Q12799 353 aa10.18□□□□□ -0.78
SGMS1-211ENST00000626236 SP7Q8TDD2 431 aaPredicted RBP10.18□□□□□ -0.78
SGMS1-211ENST00000626236 DDRGK1Q96HY6 314 aa10.18□□□□□ -0.78
SGMS1-211ENST00000626236 IDI2Q9BXS1 227 aa10.18□□□□□ -0.78
SGMS1-211ENST00000626236 NACAP1Q9BZK3 213 aa10.18□□□□□ -0.78
SGMS1-211ENST00000626236 GPBP1L1Q9HC44 474 aaPredicted RBP10.18□□□□□ -0.78
SGMS1-211ENST00000626236 EPB41L4AQ9HCS5 686 aaPredicted RBP10.18□□□□□ -0.78
SGMS1-211ENST00000626236 DDX4Q9NQI0 724 aaKnown RBP10.18□□□□□ -0.78
SGMS1-211ENST00000626236 FAM198AQ9UFP1 575 aa10.18□□□□□ -0.78
SGMS1-211ENST00000626236 SAP30BPQ9UHR5 308 aaKnown RBP10.18□□□□□ -0.78
SGMS1-211ENST00000626236 MYH8P13535 1937 aa10.17□□□□□ -0.78
SGMS1-211ENST00000626236 RPAP1Q9BWH6 1393 aaPredicted RBP10.17□□□□□ -0.78
SGMS1-211ENST00000626236 SIPA1L1O43166 1804 aa10.17□□□□□ -0.78
SGMS1-211ENST00000626236 PITPNM2Q9BZ72 1349 aa10.17□□□□□ -0.78
SGMS1-211ENST00000626236 FOXP2O15409 715 aa10.17□□□□□ -0.78
SGMS1-211ENST00000626236 REC8O95072 547 aa10.17□□□□□ -0.78
SGMS1-211ENST00000626236 POTEIP0CG38 1075 aa10.17□□□□□ -0.78
SGMS1-211ENST00000626236 POTEJP0CG39 1038 aa10.17□□□□□ -0.78
SGMS1-211ENST00000626236 TNNI2P48788 182 aa10.17□□□□□ -0.78
SGMS1-211ENST00000626236 TNFAIP1Q13829 316 aa10.17□□□□□ -0.78
SGMS1-211ENST00000626236 SLC4A8Q2Y0W8 1093 aa10.17□□□□□ -0.78
SGMS1-211ENST00000626236 APOBEC3FQ8IUX4 373 aaKnown RBP10.17□□□□□ -0.78
SGMS1-211ENST00000626236 IFNL3Q8IZI9 196 aa10.17□□□□□ -0.78
SGMS1-211ENST00000626236 DCPSQ96C86 337 aaKnown RBP10.17□□□□□ -0.78
SGMS1-211ENST00000626236 DSCC1Q9BVC3 393 aa10.17□□□□□ -0.78
SGMS1-211ENST00000626236 LSG1Q9H089 658 aaKnown RBP10.17□□□□□ -0.78
SGMS1-211ENST00000626236 OSBPL5Q9H0X9 879 aaPredicted RBP10.17□□□□□ -0.78
SGMS1-211ENST00000626236 NAPBQ9H115 298 aa10.17□□□□□ -0.78
SGMS1-211ENST00000626236 DCP1AQ9NPI6 582 aaPredicted RBP10.17□□□□□ -0.78
SGMS1-211ENST00000626236 ATP8A2Q9NTI2 1148 aa10.17□□□□□ -0.78
SGMS1-211ENST00000626236 MCM9Q9NXL9 1143 aa10.17□□□□□ -0.78
SGMS1-211ENST00000626236 CNTNAP1P78357 1384 aa10.16□□□□□ -0.78
SGMS1-211ENST00000626236 EIF5BO60841 1220 aaKnown RBP10.16□□□□□ -0.78
SGMS1-211ENST00000626236 ENTPD3O75355 529 aa10.16□□□□□ -0.78
SGMS1-211ENST00000626236 SEC24BO95487 1268 aa10.16□□□□□ -0.78
SGMS1-211ENST00000626236 FKBP1CQ5VVH2 108 aa10.16□□□□□ -0.78
SGMS1-211ENST00000626236 GIMAP6Q6P9H5 292 aa10.16□□□□□ -0.78
SGMS1-211ENST00000626236 FAM83AQ86UY5 434 aa10.16□□□□□ -0.78
SGMS1-211ENST00000626236 ZSCAN29Q8IWY8 852 aaPredicted RBP10.16□□□□□ -0.78
SGMS1-211ENST00000626236 ZFPM1Q8IX07 1006 aa10.16□□□□□ -0.78
SGMS1-211ENST00000626236 ZNF579Q8NAF0 562 aaKnown RBP10.16□□□□□ -0.78
SGMS1-211ENST00000626236 ZC3H15Q8WU90 426 aaKnown RBP10.16□□□□□ -0.78
SGMS1-211ENST00000626236 FAM151AQ8WW52 585 aa10.16□□□□□ -0.78
SGMS1-211ENST00000626236 TMEM39BQ9GZU3 492 aa10.16□□□□□ -0.78
SGMS1-211ENST00000626236 RTN4Q9NQC3 1192 aaKnown RBP10.16□□□□□ -0.78
SGMS1-211ENST00000626236 MKRN1Q9UHC7 482 aaKnown RBP10.16□□□□□ -0.78
SGMS1-211ENST00000626236 COL2A1P02458 1487 aaPredicted RBP10.16□□□□□ -0.78
SGMS1-211ENST00000626236 ZMYM6O95789 1325 aa10.15□□□□□ -0.78
SGMS1-211ENST00000626236 MINDY4BA8MYZ0 360 aa10.15□□□□□ -0.78
SGMS1-211ENST00000626236 ADM5C9JUS6 153 aa10.15□□□□□ -0.78
SGMS1-211ENST00000626236 FGAP02671 866 aa10.15□□□□□ -0.78
SGMS1-211ENST00000626236 POLR3DP05423 398 aaPredicted RBP10.15□□□□□ -0.78
SGMS1-211ENST00000626236 CYP2D6P10635 497 aa10.15□□□□□ -0.78
SGMS1-211ENST00000626236 RASA3Q14644 834 aa10.15□□□□□ -0.78
SGMS1-211ENST00000626236 CTR9Q6PD62 1173 aa10.15□□□□□ -0.78
SGMS1-211ENST00000626236 LDHDQ86WU2 507 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms