RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 FAM237AA0A1B0GTK4 181 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 PI4KAP2A4QPH2 592 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 NPHP1O15259 732 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 STX10O60499 249 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 SMC2O95347 1197 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 ATP5JP18859 108 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 USP5P45974 858 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 EXOSC10Q01780 885 aaKnown RBP4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 STK3Q13188 491 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 MFSD10Q14728 455 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 ZRSR1Q15695 479 aaKnown RBP4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 DHX32Q7L7V1 743 aaKnown RBP4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 AACSQ86V21 672 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 VSTM4Q8IW00 320 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 PI4KAP1Q8N8J0 262 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 LINC00301Q8NCQ3 95 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 DDX54Q8TDD1 881 aaKnown RBP4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 RAPGEF4Q8WZA2 1011 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 GOLGA1Q92805 767 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 EAF2Q96CJ1 260 aaPredicted RBP4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 SDF4Q9BRK5 362 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 FSD1Q9BTV5 496 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 SLC52A2Q9HAB3 445 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 GEMIN8Q9NWZ8 242 aaKnown RBP4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 MKRN1Q9UHC7 482 aaKnown RBP4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 RAB21Q9UL25 225 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 NHSQ6T4R5 1651 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 MYH13Q9UKX3 1938 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 VWA3AA6NCI4 1184 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 BTBD11A6QL63 1104 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 POLR3GO15318 223 aaPredicted RBP4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 KCNQ3O43525 872 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 SEC31AO94979 1220 aaKnown RBP4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 CTDNEP1O95476 244 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 SLC3A2P08195 630 aaKnown RBP4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 CMA1P23946 247 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 TXLNAP40222 546 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 MAGEA9P43362 315 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 TNNT3P45378 269 aaPredicted RBP4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 UBASH3AP57075 661 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 TBX2Q13207 712 aaPredicted RBP4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 COL9A3Q14050 684 aaPredicted RBP4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 KSR2Q6VAB6 950 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 MPRIPQ6WCQ1 1025 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 LEKR1Q6ZMV7 388 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 BRAPQ7Z569 592 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 TMEM139Q8IV31 216 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 CCDC191Q8NCU4 936 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 MSANTD4Q8NCY6 345 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 PARD6BQ9BYG5 372 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 CRISPLD2Q9H0B8 497 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 CHPF2Q9P2E5 772 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 DBF4Q9UBU7 674 aaPredicted RBP4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 RSPH14Q9UHP6 348 aa4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 RRP15Q9Y3B9 282 aaKnown RBP4.8□□□□□ -1.64
PTP4A1-205ENST00000626021 LY75O60449 1722 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 COL24A1Q17RW2 1714 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 MYH14Q7Z406 1995 aaKnown RBP4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 THSD7AQ9UPZ6 1657 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 AKAP11Q9UKA4 1901 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 MYO5AQ9Y4I1 1855 aaKnown RBP4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 SH3TC1Q8TE82 1336 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 PCDH11XQ9BZA7 1347 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 PCDH11YQ9BZA8 1340 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 A0A1B0GUL7 405 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 PTPDC1A2A3K4 754 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 KIF3CO14782 793 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 DTNBO60941 627 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 ZNF202O95125 648 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 CPP00450 1065 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 CYP21A2P08686 494 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 NUDT7P0C024 238 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 HSP90B1P14625 803 aaKnown RBP4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 ME1P48163 572 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 ZC3H6P61129 1189 aaKnown RBP4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 FOXK1P85037 733 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 PPP2R3AQ06190 1150 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 APOBRQ0VD83 1088 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 LONRF2Q1L5Z9 754 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 DPCR1Q3MIW9 517 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 MCMDC2Q4G0Z9 681 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 ICE2Q659A1 982 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 HDXQ7Z353 690 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 ZNF589Q86UQ0 364 aaPredicted RBP4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 IFNL2Q8IZJ0 200 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 CEP112Q8N8E3 955 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 NECTIN2Q92692 538 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 DDX17Q92841 729 aaKnown RBP4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 KIFC2Q96AC6 838 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 DCAF5Q96JK2 942 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 TCEANC2Q96MN5 208 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 DSCC1Q9BVC3 393 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 UTP14AQ9BVJ6 771 aaKnown RBP4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 GBP3Q9H0R5 595 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 HSD3B7Q9H2F3 369 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 BOLA2Q9H3K6 86 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 C9orf78Q9NZ63 289 aaPredicted RBP4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 PPP2R2CQ9Y2T4 447 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 C4AP0C0L4 1744 aa4.79□□□□□ -1.64
PTP4A1-205ENST00000626021 C4BP0C0L5 1744 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms