RNA–Protein interactions for RNA: ENST00000625905.1

NELFE-214, Transcript of negative elongation factor complex member E, humanhuman

TSL 5 BASIC

Gene NELFE, Length 111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-214ENST00000625905 NOGQ13253 232 aa11.17□□□□□ -0.62
NELFE-214ENST00000625905 MAP3K11Q16584 847 aa11.17□□□□□ -0.62
NELFE-214ENST00000625905 B4GALNT3Q6L9W6 998 aa11.17□□□□□ -0.62
NELFE-214ENST00000625905 CSRNP1Q96S65 589 aa11.17□□□□□ -0.62
NELFE-214ENST00000625905 DDX4Q9NQI0 724 aaKnown RBP11.17□□□□□ -0.62
NELFE-214ENST00000625905 NAV1Q8NEY1 1877 aa11.17□□□□□ -0.62
NELFE-214ENST00000625905 ATRNL1Q5VV63 1379 aa11.16□□□□□ -0.62
NELFE-214ENST00000625905 SALL3Q9BXA9 1300 aa11.16□□□□□ -0.62
NELFE-214ENST00000625905 ZNF532Q9HCE3 1301 aa11.16□□□□□ -0.62
NELFE-214ENST00000625905 AOC2O75106 756 aa11.16□□□□□ -0.62
NELFE-214ENST00000625905 NPM3O75607 178 aaKnown RBP11.16□□□□□ -0.62
NELFE-214ENST00000625905 PPP4CP60510 307 aa11.16□□□□□ -0.62
NELFE-214ENST00000625905 CHD1LQ86WJ1 897 aa11.16□□□□□ -0.62
NELFE-214ENST00000625905 ANKRD13AQ8IZ07 590 aa11.16□□□□□ -0.62
NELFE-214ENST00000625905 PI4K2BQ8TCG2 481 aa11.16□□□□□ -0.62
NELFE-214ENST00000625905 OSBPL5Q9H0X9 879 aaPredicted RBP11.16□□□□□ -0.62
NELFE-214ENST00000625905 DDX60LQ5H9U9 1706 aaKnown RBP11.15□□□□□ -0.62
NELFE-214ENST00000625905 FLT1P17948 1338 aa11.15□□□□□ -0.62
NELFE-214ENST00000625905 MAGEB6P1A0A0J9YX57 407 aa11.15□□□□□ -0.62
NELFE-214ENST00000625905 UNCXA6NJT0 531 aa11.15□□□□□ -0.62
NELFE-214ENST00000625905 FAM155AB1AL88 458 aaPredicted RBP11.15□□□□□ -0.62
NELFE-214ENST00000625905 CENPBP07199 599 aaPredicted RBP11.15□□□□□ -0.62
NELFE-214ENST00000625905 ADD2P35612 726 aa11.15□□□□□ -0.62
NELFE-214ENST00000625905 MAP2K2P36507 400 aa11.15□□□□□ -0.62
NELFE-214ENST00000625905 DYNLL1P63167 89 aaKnown RBP11.15□□□□□ -0.62
NELFE-214ENST00000625905 NUCB1Q02818 461 aa11.15□□□□□ -0.62
NELFE-214ENST00000625905 LDLRAD1Q5T700 205 aa11.15□□□□□ -0.62
NELFE-214ENST00000625905 ZSCAN25Q6NSZ9 544 aa11.15□□□□□ -0.62
NELFE-214ENST00000625905 MAPKAPK5Q8IW41 473 aa11.15□□□□□ -0.62
NELFE-214ENST00000625905 ZFPM1Q8IX07 1006 aa11.15□□□□□ -0.62
NELFE-214ENST00000625905 KBTBD3Q8NAB2 608 aa11.15□□□□□ -0.62
NELFE-214ENST00000625905 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.15□□□□□ -0.62
NELFE-214ENST00000625905 TGFBRAP1Q8WUH2 860 aa11.15□□□□□ -0.62
NELFE-214ENST00000625905 CLMNQ96JQ2 1002 aa11.15□□□□□ -0.62
NELFE-214ENST00000625905 WRNIP1Q96S55 665 aa11.15□□□□□ -0.62
NELFE-214ENST00000625905 ZNF341Q9BYN7 854 aa11.15□□□□□ -0.62
NELFE-214ENST00000625905 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.15□□□□□ -0.62
NELFE-214ENST00000625905 CSADQ9Y600 493 aa11.15□□□□□ -0.62
NELFE-214ENST00000625905 TCRBV5S4A2TA0A5A2 114 aa11.14□□□□□ -0.63
NELFE-214ENST00000625905 DDTLA6NHG4 134 aaPredicted RBP11.14□□□□□ -0.63
NELFE-214ENST00000625905 USP2O75604 605 aaPredicted RBP11.14□□□□□ -0.63
NELFE-214ENST00000625905 NEFLP07196 543 aa11.14□□□□□ -0.63
NELFE-214ENST00000625905 HSPA1AP0DMV8 641 aaKnown RBP11.14□□□□□ -0.63
NELFE-214ENST00000625905 HSPA1BP0DMV9 641 aaKnown RBP11.14□□□□□ -0.63
NELFE-214ENST00000625905 USP5P45974 858 aa11.14□□□□□ -0.63
NELFE-214ENST00000625905 PDE1AP54750 535 aa11.14□□□□□ -0.63
NELFE-214ENST00000625905 MAP2K1Q02750 393 aaPredicted RBP11.14□□□□□ -0.63
NELFE-214ENST00000625905 MKRN3Q13064 507 aaKnown RBP11.14□□□□□ -0.63
NELFE-214ENST00000625905 VGLL4Q14135 290 aa11.14□□□□□ -0.63
NELFE-214ENST00000625905 MIGA2Q7L4E1 593 aa11.14□□□□□ -0.63
NELFE-214ENST00000625905 SH3BP5LQ7L8J4 393 aa11.14□□□□□ -0.63
NELFE-214ENST00000625905 AIDAQ96BJ3 306 aa11.14□□□□□ -0.63
NELFE-214ENST00000625905 FSD1Q9BTV5 496 aa11.14□□□□□ -0.63
NELFE-214ENST00000625905 BEGAINQ9BUH8 593 aa11.14□□□□□ -0.63
NELFE-214ENST00000625905 MBD4O95243 580 aa11.13□□□□□ -0.63
NELFE-214ENST00000625905 MAP3K9P80192 1104 aa11.13□□□□□ -0.63
NELFE-214ENST00000625905 UBE3CQ15386 1083 aa11.13□□□□□ -0.63
NELFE-214ENST00000625905 LRRFIP1Q32MZ4 808 aaKnown RBP11.13□□□□□ -0.63
NELFE-214ENST00000625905 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.13□□□□□ -0.63
NELFE-214ENST00000625905 LCORLQ8N3X6 602 aa11.13□□□□□ -0.63
NELFE-214ENST00000625905 SLC10A4Q96EP9 437 aa11.13□□□□□ -0.63
NELFE-214ENST00000625905 WNK4Q96J92 1243 aa11.13□□□□□ -0.63
NELFE-214ENST00000625905 RIOK1Q9BRS2 568 aaKnown RBP11.13□□□□□ -0.63
NELFE-214ENST00000625905 CRNKL1Q9BZJ0 848 aaKnown RBP11.13□□□□□ -0.63
NELFE-214ENST00000625905 DHX36Q9H2U1 1008 aaKnown RBP11.13□□□□□ -0.63
NELFE-214ENST00000625905 ELP3Q9H9T3 547 aa11.13□□□□□ -0.63
NELFE-214ENST00000625905 STAP2Q9UGK3 403 aa11.13□□□□□ -0.63
NELFE-214ENST00000625905 SIPA1L1O43166 1804 aa11.13□□□□□ -0.63
NELFE-214ENST00000625905 LAMB1P07942 1786 aa11.13□□□□□ -0.63
NELFE-214ENST00000625905 DOCK1Q14185 1865 aa11.12□□□□□ -0.63
NELFE-214ENST00000625905 CHGBP05060 677 aa11.12□□□□□ -0.63
NELFE-214ENST00000625905 HLA-DOAP06340 250 aa11.12□□□□□ -0.63
NELFE-214ENST00000625905 ZFYP08048 801 aaPredicted RBP11.12□□□□□ -0.63
NELFE-214ENST00000625905 ZBTB48P10074 688 aaPredicted RBP11.12□□□□□ -0.63
NELFE-214ENST00000625905 KIF23Q02241 960 aaPredicted RBP11.12□□□□□ -0.63
NELFE-214ENST00000625905 SLFNL1Q499Z3 407 aa11.12□□□□□ -0.63
NELFE-214ENST00000625905 SPRYD7Q5W111 196 aa11.12□□□□□ -0.63
NELFE-214ENST00000625905 TRIM34Q9BYJ4 488 aa11.12□□□□□ -0.63
NELFE-214ENST00000625905 ARMT1Q9H993 441 aa11.12□□□□□ -0.63
NELFE-214ENST00000625905 SAP30BPQ9UHR5 308 aaKnown RBP11.12□□□□□ -0.63
NELFE-214ENST00000625905 SNCAIPQ9Y6H5 919 aa11.12□□□□□ -0.63
NELFE-214ENST00000625905 MYH1P12882 1939 aa11.11□□□□□ -0.63
NELFE-214ENST00000625905 SPDYE5A6NIY4 337 aa11.11□□□□□ -0.63
NELFE-214ENST00000625905 RNF113AO15541 343 aaKnown RBP11.11□□□□□ -0.63
NELFE-214ENST00000625905 INPP5BP32019 993 aa11.11□□□□□ -0.63
NELFE-214ENST00000625905 SREBF2Q12772 1141 aa11.11□□□□□ -0.63
NELFE-214ENST00000625905 SLC4A8Q2Y0W8 1093 aa11.11□□□□□ -0.63
NELFE-214ENST00000625905 REM2Q8IYK8 340 aaPredicted RBP11.11□□□□□ -0.63
NELFE-214ENST00000625905 CRACR2BQ8N4Y2 399 aaPredicted RBP11.11□□□□□ -0.63
NELFE-214ENST00000625905 APPBP2Q92624 585 aa11.11□□□□□ -0.63
NELFE-214ENST00000625905 ZKSCAN4Q969J2 545 aaPredicted RBP11.11□□□□□ -0.63
NELFE-214ENST00000625905 OPTNQ96CV9 577 aa11.11□□□□□ -0.63
NELFE-214ENST00000625905 OTUD5Q96G74 571 aa11.11□□□□□ -0.63
NELFE-214ENST00000625905 ZIC5Q96T25 663 aa11.11□□□□□ -0.63
NELFE-214ENST00000625905 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.11□□□□□ -0.63
NELFE-214ENST00000625905 WBP1LQ9NX94 342 aa11.11□□□□□ -0.63
NELFE-214ENST00000625905 PI4KBQ9UBF8 816 aa11.11□□□□□ -0.63
NELFE-214ENST00000625905 PALD1Q9ULE6 856 aa11.11□□□□□ -0.63
NELFE-214ENST00000625905 MANSC4A6NHS7 340 aaPredicted RBP11.1□□□□□ -0.63
NELFE-214ENST00000625905 FAM196BA6NMK8 535 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms