RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 PHKA1P46020 1223 aa17.55■□□□□ 0.4
LINC00552-201ENST00000625151 TTF1Q15361 905 aaPredicted RBP17.55■□□□□ 0.4
LINC00552-201ENST00000625151 UBE3CQ15386 1083 aa17.55■□□□□ 0.4
LINC00552-201ENST00000625151 FBXO38Q6PIJ6 1188 aa17.55■□□□□ 0.4
LINC00552-201ENST00000625151 SYT10Q6XYQ8 523 aa17.55■□□□□ 0.4
LINC00552-201ENST00000625151 NLRP10Q86W26 655 aa17.55■□□□□ 0.4
LINC00552-201ENST00000625151 NGLY1Q96IV0 654 aa17.55■□□□□ 0.4
LINC00552-201ENST00000625151 ZNF512BQ96KM6 892 aaPredicted RBP17.55■□□□□ 0.4
LINC00552-201ENST00000625151 FAM217BQ9NTX9 383 aaPredicted RBP17.55■□□□□ 0.4
LINC00552-201ENST00000625151 ANKRD36CQ5JPF3 1778 aa17.55■□□□□ 0.4
LINC00552-201ENST00000625151 SPATA31A5Q5VU36 1347 aa17.55■□□□□ 0.4
LINC00552-201ENST00000625151 UBN2Q6ZU65 1347 aa17.55■□□□□ 0.4
LINC00552-201ENST00000625151 SPATA31A7Q8IWB4 1347 aa17.55■□□□□ 0.4
LINC00552-201ENST00000625151 ZBTB43O43298 467 aa17.55■□□□□ 0.4
LINC00552-201ENST00000625151 KCNJ6P48051 423 aa17.55■□□□□ 0.4
LINC00552-201ENST00000625151 CTSWP56202 376 aa17.55■□□□□ 0.4
LINC00552-201ENST00000625151 RESP18Q5W5W9 173 aa17.55■□□□□ 0.4
LINC00552-201ENST00000625151 LY9Q9HBG7 655 aa17.55■□□□□ 0.4
LINC00552-201ENST00000625151 BCL9LQ86UU0 1499 aa17.54■□□□□ 0.4
LINC00552-201ENST00000625151 FAM237AA0A1B0GTK4 181 aa17.54■□□□□ 0.4
LINC00552-201ENST00000625151 TCRBV5S4A2TA0A5A2 114 aa17.54■□□□□ 0.4
LINC00552-201ENST00000625151 ANKRD18BA2A2Z9 1011 aa17.54■□□□□ 0.4
LINC00552-201ENST00000625151 CCDC102BQ68D86 513 aa17.54■□□□□ 0.4
LINC00552-201ENST00000625151 METTL16Q86W50 562 aaKnown RBP17.54■□□□□ 0.4
LINC00552-201ENST00000625151 JMYQ8N9B5 988 aa17.54■□□□□ 0.4
LINC00552-201ENST00000625151 L2HGDHQ9H9P8 463 aa17.54■□□□□ 0.4
LINC00552-201ENST00000625151 MORC2Q9Y6X9 1032 aaPredicted RBP17.54■□□□□ 0.4
LINC00552-201ENST00000625151 IARSP41252 1262 aaKnown RBP17.54■□□□□ 0.4
LINC00552-201ENST00000625151 CPLX2Q6PUV4 134 aaKnown RBP17.54■□□□□ 0.4
LINC00552-201ENST00000625151 LRRN4CLQ8ND94 238 aa17.54■□□□□ 0.4
LINC00552-201ENST00000625151 TMEM87BQ96K49 555 aa17.54■□□□□ 0.4
LINC00552-201ENST00000625151 GOLGA8AA7E2F4 631 aa17.53■□□□□ 0.4
LINC00552-201ENST00000625151 PDE8BO95263 885 aa17.53■□□□□ 0.4
LINC00552-201ENST00000625151 MYL5Q02045 173 aa17.53■□□□□ 0.4
LINC00552-201ENST00000625151 LONRF3Q496Y0 759 aa17.53■□□□□ 0.4
LINC00552-201ENST00000625151 NFXL1Q6ZNB6 911 aa17.53■□□□□ 0.4
LINC00552-201ENST00000625151 FOXP4Q8IVH2 680 aaPredicted RBP17.53■□□□□ 0.4
LINC00552-201ENST00000625151 PIGBQ92521 554 aa17.53■□□□□ 0.4
LINC00552-201ENST00000625151 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.53■□□□□ 0.4
LINC00552-201ENST00000625151 EXOC5O00471 708 aa17.53■□□□□ 0.4
LINC00552-201ENST00000625151 UBASH3AP57075 661 aa17.53■□□□□ 0.4
LINC00552-201ENST00000625151 PTPN21Q16825 1174 aa17.53■□□□□ 0.4
LINC00552-201ENST00000625151 STRBPQ96SI9 672 aaKnown RBP17.53■□□□□ 0.4
LINC00552-201ENST00000625151 ITGB4P16144 1822 aa17.53■□□□□ 0.4
LINC00552-201ENST00000625151 NUP98P52948 1817 aa17.52■□□□□ 0.4
LINC00552-201ENST00000625151 NPHP1O15259 732 aa17.52■□□□□ 0.4
LINC00552-201ENST00000625151 TMEM67Q5HYA8 995 aa17.52■□□□□ 0.4
LINC00552-201ENST00000625151 SGMS1Q86VZ5 419 aa17.52■□□□□ 0.4
LINC00552-201ENST00000625151 EPB41L4AQ9HCS5 686 aaPredicted RBP17.52■□□□□ 0.4
LINC00552-201ENST00000625151 TACC3Q9Y6A5 838 aa17.52■□□□□ 0.4
LINC00552-201ENST00000625151 WNK3Q9BYP7 1800 aa17.52■□□□□ 0.4
LINC00552-201ENST00000625151 IRS4O14654 1257 aaPredicted RBP17.52■□□□□ 0.39
LINC00552-201ENST00000625151 SERPINC1P01008 464 aa17.52■□□□□ 0.39
LINC00552-201ENST00000625151 ARID4AP29374 1257 aaPredicted RBP17.52■□□□□ 0.39
LINC00552-201ENST00000625151 CTDSPL2Q05D32 466 aa17.52■□□□□ 0.39
LINC00552-201ENST00000625151 CCDC93Q567U6 631 aa17.52■□□□□ 0.39
LINC00552-201ENST00000625151 AIDAQ96BJ3 306 aa17.52■□□□□ 0.39
LINC00552-201ENST00000625151 SLC26A6Q9BXS9 759 aa17.52■□□□□ 0.39
LINC00552-201ENST00000625151 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.52■□□□□ 0.39
LINC00552-201ENST00000625151 TBC1D2BQ9UPU7 963 aa17.52■□□□□ 0.39
LINC00552-201ENST00000625151 KAT6BQ8WYB5 2073 aa17.52■□□□□ 0.39
LINC00552-201ENST00000625151 FOXN1O15353 648 aa17.51■□□□□ 0.39
LINC00552-201ENST00000625151 NRDCO43847 1150 aa17.51■□□□□ 0.39
LINC00552-201ENST00000625151 CUTAO60888 179 aa17.51■□□□□ 0.39
LINC00552-201ENST00000625151 GOLGA8FQ08AF8 430 aa17.51■□□□□ 0.39
LINC00552-201ENST00000625151 GOLGA8DPQ0D2H9 430 aa17.51■□□□□ 0.39
LINC00552-201ENST00000625151 TRIM29Q14134 588 aa17.51■□□□□ 0.39
LINC00552-201ENST00000625151 DHX8Q14562 1220 aaKnown RBP17.51■□□□□ 0.39
LINC00552-201ENST00000625151 KRBA2Q6ZNG9 492 aa17.51■□□□□ 0.39
LINC00552-201ENST00000625151 TEX13AQ9BXU3 409 aaPredicted RBP17.51■□□□□ 0.39
LINC00552-201ENST00000625151 DOCK2Q92608 1830 aa17.51■□□□□ 0.39
LINC00552-201ENST00000625151 TMEM232C9JQI7 657 aa17.51■□□□□ 0.39
LINC00552-201ENST00000625151 STARD3NLO95772 234 aa17.51■□□□□ 0.39
LINC00552-201ENST00000625151 BMP6P22004 513 aa17.51■□□□□ 0.39
LINC00552-201ENST00000625151 CFAP100Q494V2 611 aa17.51■□□□□ 0.39
LINC00552-201ENST00000625151 SPECC1Q5M775 1068 aa17.51■□□□□ 0.39
LINC00552-201ENST00000625151 ARAP2Q8WZ64 1704 aa17.51■□□□□ 0.39
LINC00552-201ENST00000625151 FANCLQ9NW38 375 aa17.51■□□□□ 0.39
LINC00552-201ENST00000625151 ZSWIM5Q9P217 1185 aa17.51■□□□□ 0.39
LINC00552-201ENST00000625151 KCNH3Q9ULD8 1083 aa17.51■□□□□ 0.39
LINC00552-201ENST00000625151 PCDHA5Q9Y5H7 936 aa17.51■□□□□ 0.39
LINC00552-201ENST00000625151 PDE4BQ07343 736 aa17.5■□□□□ 0.39
LINC00552-201ENST00000625151 ERCC6LQ2NKX8 1250 aa17.5■□□□□ 0.39
LINC00552-201ENST00000625151 CNNM3Q8NE01 707 aa17.5■□□□□ 0.39
LINC00552-201ENST00000625151 HELBQ8NG08 1087 aaPredicted RBP17.5■□□□□ 0.39
LINC00552-201ENST00000625151 GUCY1A2P33402 732 aa17.5■□□□□ 0.39
LINC00552-201ENST00000625151 FAM98CQ17RN3 349 aaKnown RBP17.5■□□□□ 0.39
LINC00552-201ENST00000625151 VSTM4Q8IW00 320 aa17.5■□□□□ 0.39
LINC00552-201ENST00000625151 IFNL3Q8IZI9 196 aa17.5■□□□□ 0.39
LINC00552-201ENST00000625151 TMX1Q9H3N1 280 aa17.5■□□□□ 0.39
LINC00552-201ENST00000625151 TRMT112Q9UI30 125 aaKnown RBP17.5■□□□□ 0.39
LINC00552-201ENST00000625151 SLC12A7Q9Y666 1083 aa17.5■□□□□ 0.39
LINC00552-201ENST00000625151 IFIT3O14879 490 aaKnown RBP17.49■□□□□ 0.39
LINC00552-201ENST00000625151 CBFA2T2O43439 604 aa17.49■□□□□ 0.39
LINC00552-201ENST00000625151 LIFRP42702 1097 aa17.49■□□□□ 0.39
LINC00552-201ENST00000625151 SSRP1Q08945 709 aaKnown RBP17.49■□□□□ 0.39
LINC00552-201ENST00000625151 ALX1Q15699 326 aa17.49■□□□□ 0.39
LINC00552-201ENST00000625151 OLFM4Q6UX06 510 aa17.49■□□□□ 0.39
LINC00552-201ENST00000625151 HOMER1Q86YM7 354 aa17.49■□□□□ 0.39
LINC00552-201ENST00000625151 STK11IPQ8N1F8 1099 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms