RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 NAA16Q6N069 864 aaPredicted RBP15.19■□□□□ 0.02
LINC00963-217ENST00000624009 ERO1BQ86YB8 467 aa15.19■□□□□ 0.02
LINC00963-217ENST00000624009 WRNIP1Q96S55 665 aa15.19■□□□□ 0.02
LINC00963-217ENST00000624009 NOL10Q9BSC4 688 aaKnown RBP15.19■□□□□ 0.02
LINC00963-217ENST00000624009 TBC1D12O60347 775 aa15.18■□□□□ 0.02
LINC00963-217ENST00000624009 ZAP70P43403 619 aa15.18■□□□□ 0.02
LINC00963-217ENST00000624009 GTF2A2P52657 109 aa15.18■□□□□ 0.02
LINC00963-217ENST00000624009 IFNL1Q8IU54 200 aa15.18■□□□□ 0.02
LINC00963-217ENST00000624009 OPTNQ96CV9 577 aa15.18■□□□□ 0.02
LINC00963-217ENST00000624009 PTPRFP10586 1907 aa15.17■□□□□ 0.02
LINC00963-217ENST00000624009 MYH1P12882 1939 aa15.17■□□□□ 0.02
LINC00963-217ENST00000624009 DOCK1Q14185 1865 aa15.17■□□□□ 0.02
LINC00963-217ENST00000624009 IFIT2P09913 472 aaKnown RBP15.17■□□□□ 0.02
LINC00963-217ENST00000624009 PPATQ06203 517 aa15.17■□□□□ 0.02
LINC00963-217ENST00000624009 TCP10Q12799 353 aa15.17■□□□□ 0.02
LINC00963-217ENST00000624009 MAP3K12Q12852 859 aa15.17■□□□□ 0.02
LINC00963-217ENST00000624009 MS4A4AQ96JQ5 239 aa15.17■□□□□ 0.02
LINC00963-217ENST00000624009 LRRCC1Q9C099 1032 aa15.17■□□□□ 0.02
LINC00963-217ENST00000624009 DCTPP1Q9H773 170 aa15.17■□□□□ 0.02
LINC00963-217ENST00000624009 ELP3Q9H9T3 547 aa15.17■□□□□ 0.02
LINC00963-217ENST00000624009 IL1RAPL2Q9NP60 686 aa15.17■□□□□ 0.02
LINC00963-217ENST00000624009 ZCCHC17Q9NP64 241 aaKnown RBP15.17■□□□□ 0.02
LINC00963-217ENST00000624009 SNRKQ9NRH2 765 aa15.17■□□□□ 0.02
LINC00963-217ENST00000624009 TSKSQ9UJT2 592 aa15.17■□□□□ 0.02
LINC00963-217ENST00000624009 SNCAIPQ9Y6H5 919 aa15.17■□□□□ 0.02
LINC00963-217ENST00000624009 GJA5P36382 358 aa15.16■□□□□ 0.02
LINC00963-217ENST00000624009 PPIL2Q13356 520 aa15.16■□□□□ 0.02
LINC00963-217ENST00000624009 DHX36Q9H2U1 1008 aaKnown RBP15.16■□□□□ 0.02
LINC00963-217ENST00000624009 DDX4Q9NQI0 724 aaKnown RBP15.16■□□□□ 0.02
LINC00963-217ENST00000624009 PHF20L1A8MW92 1017 aa15.15■□□□□ 0.02
LINC00963-217ENST00000624009 MKRN3Q13064 507 aaKnown RBP15.15■□□□□ 0.02
LINC00963-217ENST00000624009 MIGA2Q7L4E1 593 aa15.15■□□□□ 0.02
LINC00963-217ENST00000624009 ZFPM1Q8IX07 1006 aa15.15■□□□□ 0.02
LINC00963-217ENST00000624009 OSBPL5Q9H0X9 879 aaPredicted RBP15.15■□□□□ 0.02
LINC00963-217ENST00000624009 PIH1D3Q9NQM4 214 aaKnown RBP15.15■□□□□ 0.02
LINC00963-217ENST00000624009 PHIPQ8WWQ0 1821 aa15.15■□□□□ 0.02
LINC00963-217ENST00000624009 ATAD5Q96QE3 1844 aa15.15■□□□□ 0.02
LINC00963-217ENST00000624009 CTNND1O60716 968 aaKnown RBP15.14■□□□□ 0.01
LINC00963-217ENST00000624009 CETPP11597 493 aa15.14■□□□□ 0.01
LINC00963-217ENST00000624009 ATP5JP18859 108 aa15.14■□□□□ 0.01
LINC00963-217ENST00000624009 SNAPC2Q13487 334 aa15.14■□□□□ 0.01
LINC00963-217ENST00000624009 SH3BP5LQ7L8J4 393 aa15.14■□□□□ 0.01
LINC00963-217ENST00000624009 TEX11Q8IYF3 940 aa15.14■□□□□ 0.01
LINC00963-217ENST00000624009 ZKSCAN4Q969J2 545 aaPredicted RBP15.14■□□□□ 0.01
LINC00963-217ENST00000624009 HERC5Q9UII4 1024 aaKnown RBP15.14■□□□□ 0.01
LINC00963-217ENST00000624009 KCNH4Q9UQ05 1017 aa15.14■□□□□ 0.01
LINC00963-217ENST00000624009 SIPA1L1O43166 1804 aa15.13■□□□□ 0.01
LINC00963-217ENST00000624009 DDTLA6NHG4 134 aaPredicted RBP15.13■□□□□ 0.01
LINC00963-217ENST00000624009 IGF2BP3O00425 579 aaKnown RBP eCLIP15.13■□□□□ 0.01
LINC00963-217ENST00000624009 IDH1O75874 414 aaKnown RBP15.13■□□□□ 0.01
LINC00963-217ENST00000624009 INPP5BP32019 993 aa15.13■□□□□ 0.01
LINC00963-217ENST00000624009 ZSCAN29Q8IWY8 852 aaPredicted RBP15.13■□□□□ 0.01
LINC00963-217ENST00000624009 OTUD5Q96G74 571 aa15.13■□□□□ 0.01
LINC00963-217ENST00000624009 AATFQ9NY61 560 aaKnown RBP eCLIP15.13■□□□□ 0.016e-8■■■■□ 19.9
LINC00963-217ENST00000624009 HTTP42858 3142 aa15.12■□□□□ 0.01
LINC00963-217ENST00000624009 KIAA0100Q14667 2235 aaKnown RBP15.12■□□□□ 0.01
LINC00963-217ENST00000624009 GPR25O00155 361 aa15.12■□□□□ 0.01
LINC00963-217ENST00000624009 IRF6O14896 467 aa15.12■□□□□ 0.01
LINC00963-217ENST00000624009 PICALMQ13492 652 aa15.12■□□□□ 0.01
LINC00963-217ENST00000624009 PKN2Q16513 984 aaKnown RBP15.12■□□□□ 0.01
LINC00963-217ENST00000624009 ADGRA1Q86SQ6 560 aa15.12■□□□□ 0.01
LINC00963-217ENST00000624009 METTL16Q86W50 562 aaKnown RBP15.12■□□□□ 0.01
LINC00963-217ENST00000624009 SCYL3Q8IZE3 742 aa15.12■□□□□ 0.01
LINC00963-217ENST00000624009 SH3RF3Q8TEJ3 882 aaPredicted RBP15.12■□□□□ 0.01
LINC00963-217ENST00000624009 BRI3BPQ8WY22 251 aa15.12■□□□□ 0.01
LINC00963-217ENST00000624009 YTHDC1Q96MU7 727 aaKnown RBP15.12■□□□□ 0.01
LINC00963-217ENST00000624009 PTPN18Q99952 460 aa15.12■□□□□ 0.01
LINC00963-217ENST00000624009 TBC1D2Q9BYX2 928 aa15.12■□□□□ 0.01
LINC00963-217ENST00000624009 PI4KBQ9UBF8 816 aa15.12■□□□□ 0.01
LINC00963-217ENST00000624009 TAOK2Q9UL54 1235 aa15.12■□□□□ 0.01
LINC00963-217ENST00000624009 CCL15-CCL14A0A0B4J2E2 113 aa15.11■□□□□ 0.01
LINC00963-217ENST00000624009 APBB1O00213 710 aa15.11■□□□□ 0.01
LINC00963-217ENST00000624009 CXCL11O14625 94 aa15.11■□□□□ 0.01
LINC00963-217ENST00000624009 TBC1D8O95759 1140 aa15.11■□□□□ 0.01
LINC00963-217ENST00000624009 CYP7A1P22680 504 aa15.11■□□□□ 0.01
LINC00963-217ENST00000624009 CCL15Q16663 113 aa15.11■□□□□ 0.01
LINC00963-217ENST00000624009 CTU1Q7Z7A3 348 aaKnown RBP15.11■□□□□ 0.01
LINC00963-217ENST00000624009 MAGEB6Q8N7X4 407 aa15.11■□□□□ 0.01
LINC00963-217ENST00000624009 ZNF296Q8WUU4 475 aaPredicted RBP15.11■□□□□ 0.01
LINC00963-217ENST00000624009 HAUS7Q99871 368 aa15.11■□□□□ 0.01
LINC00963-217ENST00000624009 ANTXR1Q9H6X2 564 aa15.11■□□□□ 0.01
LINC00963-217ENST00000624009 GINM1Q9NU53 330 aa15.11■□□□□ 0.01
LINC00963-217ENST00000624009 FLT1P17948 1338 aa15.11■□□□□ 0.01
LINC00963-217ENST00000624009 FKTNO75072 461 aa15.1■□□□□ 0.01
LINC00963-217ENST00000624009 FOXP4Q8IVH2 680 aaPredicted RBP15.1■□□□□ 0.01
LINC00963-217ENST00000624009 CNKSR2Q8WXI2 1034 aa15.1■□□□□ 0.01
LINC00963-217ENST00000624009 GPATCH3Q96I76 525 aa15.1■□□□□ 0.01
LINC00963-217ENST00000624009 PICK1Q9NRD5 415 aa15.1■□□□□ 0.01
LINC00963-217ENST00000624009 PAG1Q9NWQ8 432 aa15.1■□□□□ 0.01
LINC00963-217ENST00000624009 PCDHB15Q9Y5E8 787 aa15.1■□□□□ 0.01
LINC00963-217ENST00000624009 DDX60LQ5H9U9 1706 aaKnown RBP15.09■□□□□ 0.01
LINC00963-217ENST00000624009 CENPFP49454 3210 aa15.09■□□□□ 0.01
LINC00963-217ENST00000624009 PDE6AP16499 860 aa15.09■□□□□ 0.01
LINC00963-217ENST00000624009 PTPRAP18433 802 aa15.09■□□□□ 0.01
LINC00963-217ENST00000624009 SLC9C2Q5TAH2 1124 aa15.09■□□□□ 0.01
LINC00963-217ENST00000624009 ABHD8Q96I13 439 aa15.09■□□□□ 0.01
LINC00963-217ENST00000624009 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.09■□□□□ 0.01
LINC00963-217ENST00000624009 MCOLN1Q9GZU1 580 aa15.09■□□□□ 0.01
LINC00963-217ENST00000624009 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.09■□□□□ 0.01
LINC00963-217ENST00000624009 ECHDC1Q9NTX5 307 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms