RNA–Protein interactions for RNA: ENST00000623219.3

LINC00643-205, long intergenic non-protein coding RNA 643, humanhuman

TSL 1 (best)

Gene LINC00643, Length 962 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-205ENST00000623219 WDHD1O75717 1129 aaPredicted RBP18.14■□□□□ 0.49
LINC00643-205ENST00000623219 DGKZQ13574 1117 aa18.14■□□□□ 0.49
LINC00643-205ENST00000623219 OTUD5Q96G74 571 aa18.14■□□□□ 0.49
LINC00643-205ENST00000623219 MCOLN1Q9GZU1 580 aa18.14■□□□□ 0.49
LINC00643-205ENST00000623219 CCDC8Q9H0W5 538 aaPredicted RBP18.14■□□□□ 0.49
LINC00643-205ENST00000623219 ZSWIM8A7E2V4 1837 aa18.14■□□□□ 0.49
LINC00643-205ENST00000623219 HTTP42858 3142 aa18.13■□□□□ 0.49
LINC00643-205ENST00000623219 NPM3O75607 178 aaKnown RBP18.13■□□□□ 0.49
LINC00643-205ENST00000623219 CYP2E1P05181 493 aaPredicted RBP18.13■□□□□ 0.49
LINC00643-205ENST00000623219 RHBDL3P58872 404 aa18.13■□□□□ 0.49
LINC00643-205ENST00000623219 C20orf194Q5TEA3 1177 aa18.13■□□□□ 0.49
LINC00643-205ENST00000623219 OTUD7BQ6GQQ9 843 aa18.13■□□□□ 0.49
LINC00643-205ENST00000623219 MIGA2Q7L4E1 593 aa18.13■□□□□ 0.49
LINC00643-205ENST00000623219 AACSQ86V21 672 aa18.13■□□□□ 0.49
LINC00643-205ENST00000623219 ERO1BQ86YB8 467 aa18.13■□□□□ 0.49
LINC00643-205ENST00000623219 SIRT2Q8IXJ6 389 aa18.13■□□□□ 0.49
LINC00643-205ENST00000623219 RHPN1Q8TCX5 695 aa18.13■□□□□ 0.49
LINC00643-205ENST00000623219 CNKSR2Q8WXI2 1034 aa18.13■□□□□ 0.49
LINC00643-205ENST00000623219 ZKSCAN4Q969J2 545 aaPredicted RBP18.13■□□□□ 0.49
LINC00643-205ENST00000623219 KIF1BPQ96EK5 621 aa18.13■□□□□ 0.49
LINC00643-205ENST00000623219 DDX4Q9NQI0 724 aaKnown RBP18.13■□□□□ 0.49
LINC00643-205ENST00000623219 SNRKQ9NRH2 765 aa18.13■□□□□ 0.49
LINC00643-205ENST00000623219 ZNF112Q9UJU3 913 aa18.13■□□□□ 0.49
LINC00643-205ENST00000623219 RBBP6Q7Z6E9 1792 aaKnown RBP18.12■□□□□ 0.49
LINC00643-205ENST00000623219 GPR25O00155 361 aa18.12■□□□□ 0.49
LINC00643-205ENST00000623219 ZAP70P43403 619 aa18.12■□□□□ 0.49
LINC00643-205ENST00000623219 GTF2A2P52657 109 aa18.12■□□□□ 0.49
LINC00643-205ENST00000623219 NAA16Q6N069 864 aaPredicted RBP18.12■□□□□ 0.49
LINC00643-205ENST00000623219 ZFPM1Q8IX07 1006 aa18.12■□□□□ 0.49
LINC00643-205ENST00000623219 ZNF296Q8WUU4 475 aaPredicted RBP18.12■□□□□ 0.49
LINC00643-205ENST00000623219 MS4A4AQ96JQ5 239 aa18.12■□□□□ 0.49
LINC00643-205ENST00000623219 INPP5BP32019 993 aa18.11■□□□□ 0.49
LINC00643-205ENST00000623219 PPIL2Q13356 520 aa18.11■□□□□ 0.49
LINC00643-205ENST00000623219 PICALMQ13492 652 aa18.11■□□□□ 0.49
LINC00643-205ENST00000623219 NOL9Q5SY16 702 aaKnown RBP18.11■□□□□ 0.49
LINC00643-205ENST00000623219 CTU1Q7Z7A3 348 aaKnown RBP18.11■□□□□ 0.49
LINC00643-205ENST00000623219 ZSCAN29Q8IWY8 852 aaPredicted RBP18.11■□□□□ 0.49
LINC00643-205ENST00000623219 NOL10Q9BSC4 688 aaKnown RBP18.11■□□□□ 0.49
LINC00643-205ENST00000623219 IL1RAPL2Q9NP60 686 aa18.11■□□□□ 0.49
LINC00643-205ENST00000623219 CENPFP49454 3210 aa18.1■□□□□ 0.49
LINC00643-205ENST00000623219 BAZ2AQ9UIF9 1905 aaKnown RBP18.1■□□□□ 0.49
LINC00643-205ENST00000623219 CCL15-CCL14A0A0B4J2E2 113 aa18.1■□□□□ 0.49
LINC00643-205ENST00000623219 RAB11FIP3O75154 756 aa18.1■□□□□ 0.49
LINC00643-205ENST00000623219 CCL15Q16663 113 aa18.1■□□□□ 0.49
LINC00643-205ENST00000623219 SH3BP5LQ7L8J4 393 aa18.1■□□□□ 0.49
LINC00643-205ENST00000623219 CLASRPQ8N2M8 674 aaKnown RBP18.1■□□□□ 0.49
LINC00643-205ENST00000623219 PTPN18Q99952 460 aa18.1■□□□□ 0.49
LINC00643-205ENST00000623219 DDTLA6NHG4 134 aaPredicted RBP18.09■□□□□ 0.49
LINC00643-205ENST00000623219 PLCG2P16885 1265 aa18.09■□□□□ 0.49
LINC00643-205ENST00000623219 PPATQ06203 517 aa18.09■□□□□ 0.49
LINC00643-205ENST00000623219 BRI3BPQ8WY22 251 aa18.09■□□□□ 0.49
LINC00643-205ENST00000623219 IRF6O14896 467 aa18.08■□□□□ 0.48
LINC00643-205ENST00000623219 FKTNO75072 461 aa18.08■□□□□ 0.48
LINC00643-205ENST00000623219 BAG3O95817 575 aa18.08■□□□□ 0.48
LINC00643-205ENST00000623219 CETPP11597 493 aa18.08■□□□□ 0.48
LINC00643-205ENST00000623219 MAP3K10Q02779 954 aa18.08■□□□□ 0.48
LINC00643-205ENST00000623219 CRHR2Q13324 411 aa18.08■□□□□ 0.48
LINC00643-205ENST00000623219 SNAPC2Q13487 334 aa18.08■□□□□ 0.48
LINC00643-205ENST00000623219 TEX11Q8IYF3 940 aa18.08■□□□□ 0.48
LINC00643-205ENST00000623219 OSBPL5Q9H0X9 879 aaPredicted RBP18.08■□□□□ 0.48
LINC00643-205ENST00000623219 R3HDMLQ9H3Y0 253 aa18.08■□□□□ 0.48
LINC00643-205ENST00000623219 PIH1D3Q9NQM4 214 aaKnown RBP18.08■□□□□ 0.48
LINC00643-205ENST00000623219 AATFQ9NY61 560 aaKnown RBP eCLIP18.08■□□□□ 0.48
LINC00643-205ENST00000623219 PHF20L1A8MW92 1017 aa18.07■□□□□ 0.48
LINC00643-205ENST00000623219 APBB1O00213 710 aa18.07■□□□□ 0.48
LINC00643-205ENST00000623219 PKN2Q16513 984 aaKnown RBP18.07■□□□□ 0.48
LINC00643-205ENST00000623219 TMED8Q6PL24 325 aaPredicted RBP18.07■□□□□ 0.48
LINC00643-205ENST00000623219 ADGRA1Q86SQ6 560 aa18.07■□□□□ 0.48
LINC00643-205ENST00000623219 SH3RF3Q8TEJ3 882 aaPredicted RBP18.07■□□□□ 0.48
LINC00643-205ENST00000623219 ZCCHC17Q9NP64 241 aaKnown RBP18.07■□□□□ 0.48
LINC00643-205ENST00000623219 IDH1O75874 414 aaKnown RBP18.06■□□□□ 0.48
LINC00643-205ENST00000623219 IFIT2P09913 472 aaKnown RBP18.06■□□□□ 0.48
LINC00643-205ENST00000623219 PPP4CP60510 307 aa18.06■□□□□ 0.48
LINC00643-205ENST00000623219 CERS3Q8IU89 383 aa18.06■□□□□ 0.48
LINC00643-205ENST00000623219 SCYL3Q8IZE3 742 aa18.06■□□□□ 0.48
LINC00643-205ENST00000623219 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.06■□□□□ 0.48
LINC00643-205ENST00000623219 TBC1D12O60347 775 aa18.05■□□□□ 0.48
LINC00643-205ENST00000623219 TTF1Q15361 905 aaPredicted RBP18.05■□□□□ 0.48
LINC00643-205ENST00000623219 TAF1CQ15572 869 aaPredicted RBP18.05■□□□□ 0.48
LINC00643-205ENST00000623219 FAM43AQ8N2R8 423 aa18.05■□□□□ 0.48
LINC00643-205ENST00000623219 KCNH4Q9UQ05 1017 aa18.05■□□□□ 0.48
LINC00643-205ENST00000623219 NDUFB9Q9Y6M9 179 aa18.05■□□□□ 0.48
LINC00643-205ENST00000623219 TNRC18O15417 2968 aaPredicted RBP18.05■□□□□ 0.48
LINC00643-205ENST00000623219 FLT1P17948 1338 aa18.04■□□□□ 0.48
LINC00643-205ENST00000623219 CCDC85CA6NKD9 419 aa18.04■□□□□ 0.48
LINC00643-205ENST00000623219 MAP3K12Q12852 859 aa18.04■□□□□ 0.48
LINC00643-205ENST00000623219 ANTXR1Q9H6X2 564 aa18.04■□□□□ 0.48
LINC00643-205ENST00000623219 PICK1Q9NRD5 415 aa18.04■□□□□ 0.48
LINC00643-205ENST00000623219 BTBD19C9JJ37 291 aa18.03■□□□□ 0.48
LINC00643-205ENST00000623219 CTNND1O60716 968 aaKnown RBP18.03■□□□□ 0.48
LINC00643-205ENST00000623219 CYP7A1P22680 504 aa18.03■□□□□ 0.48
LINC00643-205ENST00000623219 RRP1P56182 461 aaKnown RBP18.03■□□□□ 0.48
LINC00643-205ENST00000623219 MAGEB6Q8N7X4 407 aa18.03■□□□□ 0.48
LINC00643-205ENST00000623219 ERO1AQ96HE7 468 aa18.03■□□□□ 0.48
LINC00643-205ENST00000623219 LRRCC1Q9C099 1032 aa18.03■□□□□ 0.48
LINC00643-205ENST00000623219 DHX36Q9H2U1 1008 aaKnown RBP18.03■□□□□ 0.48
LINC00643-205ENST00000623219 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.03■□□□□ 0.48
LINC00643-205ENST00000623219 ZFYVE28Q9HCC9 887 aa18.03■□□□□ 0.48
LINC00643-205ENST00000623219 HERC5Q9UII4 1024 aaKnown RBP18.03■□□□□ 0.48
LINC00643-205ENST00000623219 PTPRAP18433 802 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms