RNA–Protein interactions for RNA: ENST00000622656.1

PCDHGC3-207, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-207ENST00000622656 DOCK1Q14185 1865 aa12.51□□□□□ -0.41
PCDHGC3-207ENST00000622656 GPR75-ASB3A0A0A6YYF3 556 aa12.51□□□□□ -0.41
PCDHGC3-207ENST00000622656 CCL15-CCL14A0A0B4J2E2 113 aa12.51□□□□□ -0.41
PCDHGC3-207ENST00000622656 IRF6O14896 467 aa12.51□□□□□ -0.41
PCDHGC3-207ENST00000622656 FKTNO75072 461 aa12.51□□□□□ -0.41
PCDHGC3-207ENST00000622656 CYP2E1P05181 493 aaPredicted RBP12.51□□□□□ -0.41
PCDHGC3-207ENST00000622656 ZAP70P43403 619 aa12.51□□□□□ -0.41
PCDHGC3-207ENST00000622656 PICALMQ13492 652 aa12.51□□□□□ -0.41
PCDHGC3-207ENST00000622656 CCL15Q16663 113 aa12.51□□□□□ -0.41
PCDHGC3-207ENST00000622656 NOM1Q5C9Z4 860 aaKnown RBP12.51□□□□□ -0.41
PCDHGC3-207ENST00000622656 ZNF341Q9BYN7 854 aa12.51□□□□□ -0.41
PCDHGC3-207ENST00000622656 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.51□□□□□ -0.41
PCDHGC3-207ENST00000622656 RCAN3Q9UKA8 241 aa12.51□□□□□ -0.41
PCDHGC3-207ENST00000622656 FAM196BA6NMK8 535 aa12.5□□□□□ -0.41
PCDHGC3-207ENST00000622656 PHF20L1A8MW92 1017 aa12.5□□□□□ -0.41
PCDHGC3-207ENST00000622656 ALDH1A1P00352 501 aa12.5□□□□□ -0.41
PCDHGC3-207ENST00000622656 TTC39AQ5SRH9 613 aa12.5□□□□□ -0.41
PCDHGC3-207ENST00000622656 DCAF15Q66K64 600 aa12.5□□□□□ -0.41
PCDHGC3-207ENST00000622656 SPTY2D1Q68D10 685 aaPredicted RBP12.5□□□□□ -0.41
PCDHGC3-207ENST00000622656 ADGRA1Q86SQ6 560 aa12.5□□□□□ -0.41
PCDHGC3-207ENST00000622656 ERO1BQ86YB8 467 aa12.5□□□□□ -0.41
PCDHGC3-207ENST00000622656 PIH1D3Q9NQM4 214 aaKnown RBP12.5□□□□□ -0.41
PCDHGC3-207ENST00000622656 RAI14Q9P0K7 980 aa12.5□□□□□ -0.41
PCDHGC3-207ENST00000622656 BTBD19C9JJ37 291 aa12.49□□□□□ -0.41
PCDHGC3-207ENST00000622656 ENTPD3O75355 529 aa12.49□□□□□ -0.41
PCDHGC3-207ENST00000622656 UQCRFS1P1P0C7P4 283 aa12.49□□□□□ -0.41
PCDHGC3-207ENST00000622656 SOX10P56693 466 aa12.49□□□□□ -0.41
PCDHGC3-207ENST00000622656 CD99L2Q8TCZ2 262 aa12.49□□□□□ -0.41
PCDHGC3-207ENST00000622656 IL1RAPL2Q9NP60 686 aa12.49□□□□□ -0.41
PCDHGC3-207ENST00000622656 ZBTB40Q9NUA8 1239 aa12.49□□□□□ -0.41
PCDHGC3-207ENST00000622656 HPS5Q9UPZ3 1129 aa12.49□□□□□ -0.41
PCDHGC3-207ENST00000622656 RGS19P49795 217 aa12.48□□□□□ -0.41
PCDHGC3-207ENST00000622656 GTF2A2P52657 109 aa12.48□□□□□ -0.41
PCDHGC3-207ENST00000622656 PPIL2Q13356 520 aa12.48□□□□□ -0.41
PCDHGC3-207ENST00000622656 MOGSQ13724 837 aa12.48□□□□□ -0.41
PCDHGC3-207ENST00000622656 TAF1CQ15572 869 aaPredicted RBP12.48□□□□□ -0.41
PCDHGC3-207ENST00000622656 CCDC84Q86UT8 332 aaPredicted RBP12.48□□□□□ -0.41
PCDHGC3-207ENST00000622656 ZSCAN29Q8IWY8 852 aaPredicted RBP12.48□□□□□ -0.41
PCDHGC3-207ENST00000622656 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.48□□□□□ -0.41
PCDHGC3-207ENST00000622656 SH3RF3Q8TEJ3 882 aaPredicted RBP12.48□□□□□ -0.41
PCDHGC3-207ENST00000622656 ANTXR1Q9H6X2 564 aa12.48□□□□□ -0.41
PCDHGC3-207ENST00000622656 LRP2BPQ9P2M1 347 aa12.48□□□□□ -0.41
PCDHGC3-207ENST00000622656 MYH1P12882 1939 aa12.48□□□□□ -0.41
PCDHGC3-207ENST00000622656 APBB1O00213 710 aa12.47□□□□□ -0.41
PCDHGC3-207ENST00000622656 MAP3K10Q02779 954 aa12.47□□□□□ -0.41
PCDHGC3-207ENST00000622656 PPATQ06203 517 aa12.47□□□□□ -0.41
PCDHGC3-207ENST00000622656 RRP1BQ14684 758 aaKnown RBP12.47□□□□□ -0.41
PCDHGC3-207ENST00000622656 CCDC158Q5M9N0 1113 aa12.47□□□□□ -0.41
PCDHGC3-207ENST00000622656 NOL9Q5SY16 702 aaKnown RBP12.47□□□□□ -0.41
PCDHGC3-207ENST00000622656 OTOP1Q7RTM1 612 aa12.47□□□□□ -0.41
PCDHGC3-207ENST00000622656 SLF2Q8IX21 1173 aa12.47□□□□□ -0.41
PCDHGC3-207ENST00000622656 HOOK2Q96ED9 719 aa12.47□□□□□ -0.41
PCDHGC3-207ENST00000622656 CETPP11597 493 aa12.46□□□□□ -0.41
PCDHGC3-207ENST00000622656 DYNLL1P63167 89 aaKnown RBP12.46□□□□□ -0.41
PCDHGC3-207ENST00000622656 SNAPC2Q13487 334 aa12.46□□□□□ -0.41
PCDHGC3-207ENST00000622656 OTUD7BQ6GQQ9 843 aa12.46□□□□□ -0.41
PCDHGC3-207ENST00000622656 AACSQ86V21 672 aa12.46□□□□□ -0.41
PCDHGC3-207ENST00000622656 RHPN1Q8TCX5 695 aa12.46□□□□□ -0.41
PCDHGC3-207ENST00000622656 ZNF512BQ96KM6 892 aaPredicted RBP12.46□□□□□ -0.41
PCDHGC3-207ENST00000622656 BCL11AQ9H165 835 aa12.46□□□□□ -0.41
PCDHGC3-207ENST00000622656 AATFQ9NY61 560 aaKnown RBP eCLIP12.46□□□□□ -0.41
PCDHGC3-207ENST00000622656 KCNH4Q9UQ05 1017 aa12.46□□□□□ -0.41
PCDHGC3-207ENST00000622656 TRIM17Q9Y577 477 aa12.46□□□□□ -0.41
PCDHGC3-207ENST00000622656 BRCA2P51587 3418 aa12.46□□□□□ -0.42
PCDHGC3-207ENST00000622656 MGAMO43451 1857 aa12.45□□□□□ -0.42
PCDHGC3-207ENST00000622656 ECM2O94769 699 aaPredicted RBP12.45□□□□□ -0.42
PCDHGC3-207ENST00000622656 LDHCP07864 332 aa12.45□□□□□ -0.42
PCDHGC3-207ENST00000622656 GSTO1P78417 241 aa12.45□□□□□ -0.42
PCDHGC3-207ENST00000622656 SP3Q02447 781 aa12.45□□□□□ -0.42
PCDHGC3-207ENST00000622656 NAA16Q6N069 864 aaPredicted RBP12.45□□□□□ -0.42
PCDHGC3-207ENST00000622656 FBXO46Q6PJ61 603 aaPredicted RBP12.45□□□□□ -0.42
PCDHGC3-207ENST00000622656 TEX11Q8IYF3 940 aa12.45□□□□□ -0.42
PCDHGC3-207ENST00000622656 SCYL3Q8IZE3 742 aa12.45□□□□□ -0.42
PCDHGC3-207ENST00000622656 ARHGAP39Q9C0H5 1083 aa12.45□□□□□ -0.42
PCDHGC3-207ENST00000622656 OSBPL5Q9H0X9 879 aaPredicted RBP12.45□□□□□ -0.42
PCDHGC3-207ENST00000622656 DDX19BQ9UMR2 479 aa12.45□□□□□ -0.42
PCDHGC3-207ENST00000622656 PTPRAP18433 802 aa12.44□□□□□ -0.42
PCDHGC3-207ENST00000622656 CTGFP29279 349 aa12.44□□□□□ -0.42
PCDHGC3-207ENST00000622656 JAG1P78504 1218 aa12.44□□□□□ -0.42
PCDHGC3-207ENST00000622656 PKN2Q16513 984 aaKnown RBP12.44□□□□□ -0.42
PCDHGC3-207ENST00000622656 SHROOM1Q2M3G4 852 aaPredicted RBP12.44□□□□□ -0.42
PCDHGC3-207ENST00000622656 GPAT2Q6NUI2 795 aa12.44□□□□□ -0.42
PCDHGC3-207ENST00000622656 MAPKAPK5Q8IW41 473 aa12.44□□□□□ -0.42
PCDHGC3-207ENST00000622656 RPAP2Q8IXW5 612 aaPredicted RBP12.44□□□□□ -0.42
PCDHGC3-207ENST00000622656 ZFYVE28Q9HCC9 887 aa12.44□□□□□ -0.42
PCDHGC3-207ENST00000622656 DOCK3Q8IZD9 2030 aa12.44□□□□□ -0.42
PCDHGC3-207ENST00000622656 KIAA0100Q14667 2235 aaKnown RBP12.43□□□□□ -0.42
PCDHGC3-207ENST00000622656 MKI67P46013 3256 aaKnown RBP12.43□□□□□ -0.42
PCDHGC3-207ENST00000622656 ADGRA2Q96PE1 1338 aa12.43□□□□□ -0.42
PCDHGC3-207ENST00000622656 COL2A1P02458 1487 aaPredicted RBP12.43□□□□□ -0.42
PCDHGC3-207ENST00000622656 PDHXO00330 501 aa12.43□□□□□ -0.42
PCDHGC3-207ENST00000622656 TLR2O60603 784 aa12.43□□□□□ -0.42
PCDHGC3-207ENST00000622656 NPM3O75607 178 aaKnown RBP12.43□□□□□ -0.42
PCDHGC3-207ENST00000622656 IDH1O75874 414 aaKnown RBP12.43□□□□□ -0.42
PCDHGC3-207ENST00000622656 MS4A1P11836 297 aa12.43□□□□□ -0.42
PCDHGC3-207ENST00000622656 PPP4CP60510 307 aa12.43□□□□□ -0.42
PCDHGC3-207ENST00000622656 MLLT1Q03111 559 aaPredicted RBP12.43□□□□□ -0.42
PCDHGC3-207ENST00000622656 SLC4A8Q2Y0W8 1093 aa12.43□□□□□ -0.42
PCDHGC3-207ENST00000622656 TGFBRAP1Q8WUH2 860 aa12.43□□□□□ -0.42
PCDHGC3-207ENST00000622656 EDC3Q96F86 508 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms