RNA–Protein interactions for RNA: ENST00000622534.1

GTF3C2-214, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5 BASIC

Gene GTF3C2, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-214ENST00000622534 DDX60LQ5H9U9 1706 aaKnown RBP17.24■□□□□ 0.35
GTF3C2-214ENST00000622534 CDK5RAP2Q96SN8 1893 aa17.24■□□□□ 0.35
GTF3C2-214ENST00000622534 WDR90Q96KV7 1748 aa17.24■□□□□ 0.35
GTF3C2-214ENST00000622534 ZNF213O14771 459 aa17.24■□□□□ 0.35
GTF3C2-214ENST00000622534 EPS15P42566 896 aa17.24■□□□□ 0.35
GTF3C2-214ENST00000622534 SAMD7Q7Z3H4 446 aa17.24■□□□□ 0.35
GTF3C2-214ENST00000622534 MAPKAPK5Q8IW41 473 aa17.24■□□□□ 0.35
GTF3C2-214ENST00000622534 EGFRP00533 1210 aa17.23■□□□□ 0.35
GTF3C2-214ENST00000622534 NBPF9Q3BBW0 867 aa17.23■□□□□ 0.35
GTF3C2-214ENST00000622534 TBC1D10BQ4KMP7 808 aaPredicted RBP17.23■□□□□ 0.35
GTF3C2-214ENST00000622534 OSBPL5Q9H0X9 879 aaPredicted RBP17.23■□□□□ 0.35
GTF3C2-214ENST00000622534 DDX4Q9NQI0 724 aaKnown RBP17.23■□□□□ 0.35
GTF3C2-214ENST00000622534 MCM9Q9NXL9 1143 aa17.23■□□□□ 0.35
GTF3C2-214ENST00000622534 FAM198AQ9UFP1 575 aa17.23■□□□□ 0.35
GTF3C2-214ENST00000622534 HACL1Q9UJ83 578 aa17.23■□□□□ 0.35
GTF3C2-214ENST00000622534 TAOK2Q9UL54 1235 aa17.23■□□□□ 0.35
GTF3C2-214ENST00000622534 PALD1Q9ULE6 856 aa17.23■□□□□ 0.35
GTF3C2-214ENST00000622534 SNX14Q9Y5W7 946 aa17.23■□□□□ 0.35
GTF3C2-214ENST00000622534 LAMA4Q16363 1823 aa17.23■□□□□ 0.35
GTF3C2-214ENST00000622534 USP17L12C9JPN9 530 aa17.22■□□□□ 0.35
GTF3C2-214ENST00000622534 USP17L21D6R901 530 aa17.22■□□□□ 0.35
GTF3C2-214ENST00000622534 NFIAQ12857 509 aa17.22■□□□□ 0.35
GTF3C2-214ENST00000622534 KRT32Q14532 448 aa17.22■□□□□ 0.35
GTF3C2-214ENST00000622534 FAM83AQ86UY5 434 aa17.22■□□□□ 0.35
GTF3C2-214ENST00000622534 AMOTL1Q8IY63 956 aa17.22■□□□□ 0.35
GTF3C2-214ENST00000622534 RASEFQ8IZ41 740 aa17.22■□□□□ 0.35
GTF3C2-214ENST00000622534 IL27Q8NEV9 243 aa17.22■□□□□ 0.35
GTF3C2-214ENST00000622534 NAV1Q8NEY1 1877 aa17.22■□□□□ 0.35
GTF3C2-214ENST00000622534 IQCA1LA6NCM1 817 aa17.22■□□□□ 0.35
GTF3C2-214ENST00000622534 PPARAQ07869 468 aa17.22■□□□□ 0.35
GTF3C2-214ENST00000622534 C12orf60Q5U649 245 aa17.22■□□□□ 0.35
GTF3C2-214ENST00000622534 TRPM4Q8TD43 1214 aa17.22■□□□□ 0.35
GTF3C2-214ENST00000622534 KIF2CQ99661 725 aa17.22■□□□□ 0.35
GTF3C2-214ENST00000622534 DHX36Q9H2U1 1008 aaKnown RBP17.22■□□□□ 0.35
GTF3C2-214ENST00000622534 ATRNL1Q5VV63 1379 aa17.21■□□□□ 0.35
GTF3C2-214ENST00000622534 ROBO3Q96MS0 1386 aa17.21■□□□□ 0.35
GTF3C2-214ENST00000622534 SCN4AP35499 1836 aa17.21■□□□□ 0.35
GTF3C2-214ENST00000622534 PCP11498 1178 aaKnown RBP17.21■□□□□ 0.35
GTF3C2-214ENST00000622534 RBM26Q5T8P6 1007 aaKnown RBP17.21■□□□□ 0.35
GTF3C2-214ENST00000622534 USP50Q70EL3 339 aaPredicted RBP17.21■□□□□ 0.35
GTF3C2-214ENST00000622534 FAM151AQ8WW52 585 aa17.21■□□□□ 0.35
GTF3C2-214ENST00000622534 TM6SF1Q9BZW5 370 aa17.21■□□□□ 0.35
GTF3C2-214ENST00000622534 TSHZ2Q9NRE2 1034 aa17.21■□□□□ 0.35
GTF3C2-214ENST00000622534 CLRN2A0PK11 232 aa17.2■□□□□ 0.34
GTF3C2-214ENST00000622534 FGRP09769 529 aa17.2■□□□□ 0.34
GTF3C2-214ENST00000622534 NT5C2P49902 561 aa17.2■□□□□ 0.34
GTF3C2-214ENST00000622534 PICALMQ13492 652 aa17.2■□□□□ 0.34
GTF3C2-214ENST00000622534 TTC6Q86TZ1 520 aa17.2■□□□□ 0.34
GTF3C2-214ENST00000622534 NBPF3Q9H094 633 aa17.2■□□□□ 0.34
GTF3C2-214ENST00000622534 PITPNM2Q9BZ72 1349 aa17.2■□□□□ 0.34
GTF3C2-214ENST00000622534 LAMB1P07942 1786 aa17.2■□□□□ 0.34
GTF3C2-214ENST00000622534 UTRNP46939 3433 aa17.2■□□□□ 0.34
GTF3C2-214ENST00000622534 TNNI2P48788 182 aa17.2■□□□□ 0.34
GTF3C2-214ENST00000622534 HIRAP54198 1017 aaPredicted RBP17.2■□□□□ 0.34
GTF3C2-214ENST00000622534 CACNB3P54284 484 aa17.2■□□□□ 0.34
GTF3C2-214ENST00000622534 TNFAIP1Q13829 316 aa17.2■□□□□ 0.34
GTF3C2-214ENST00000622534 STAG1Q8WVM7 1258 aa17.2■□□□□ 0.34
GTF3C2-214ENST00000622534 CNTNAP1P78357 1384 aa17.2■□□□□ 0.34
GTF3C2-214ENST00000622534 MINDY4BA8MYZ0 360 aa17.19■□□□□ 0.34
GTF3C2-214ENST00000622534 POTECB2RU33 542 aa17.19■□□□□ 0.34
GTF3C2-214ENST00000622534 E7EWF7 191 aa17.19■□□□□ 0.34
GTF3C2-214ENST00000622534 POLR3DP05423 398 aaPredicted RBP17.19■□□□□ 0.34
GTF3C2-214ENST00000622534 SLC3A2P08195 630 aaKnown RBP17.19■□□□□ 0.34
GTF3C2-214ENST00000622534 EPHX2P34913 555 aa17.19■□□□□ 0.34
GTF3C2-214ENST00000622534 HAND2P61296 217 aa17.19■□□□□ 0.34
GTF3C2-214ENST00000622534 APOBEC3FQ8IUX4 373 aaKnown RBP17.19■□□□□ 0.34
GTF3C2-214ENST00000622534 EHD4Q9H223 541 aa17.19■□□□□ 0.34
GTF3C2-214ENST00000622534 RNF41Q9H4P4 317 aaPredicted RBP17.19■□□□□ 0.34
GTF3C2-214ENST00000622534 PSMA5P28066 241 aa17.18■□□□□ 0.34
GTF3C2-214ENST00000622534 AKNAD1Q5T1N1 836 aa17.18■□□□□ 0.34
GTF3C2-214ENST00000622534 TBC1D10CQ8IV04 446 aa17.18■□□□□ 0.34
GTF3C2-214ENST00000622534 ZC3H15Q8WU90 426 aaKnown RBP17.18■□□□□ 0.34
GTF3C2-214ENST00000622534 VEZTQ9HBM0 779 aa17.18■□□□□ 0.34
GTF3C2-214ENST00000622534 SAP30BPQ9UHR5 308 aaKnown RBP17.18■□□□□ 0.34
GTF3C2-214ENST00000622534 TAF6LQ9Y6J9 622 aa17.18■□□□□ 0.34
GTF3C2-214ENST00000622534 TCP10L2B9ZVM9 353 aa17.18■□□□□ 0.34
GTF3C2-214ENST00000622534 CYP2D6P10635 497 aa17.18■□□□□ 0.34
GTF3C2-214ENST00000622534 STOX1Q6ZVD7 989 aa17.18■□□□□ 0.34
GTF3C2-214ENST00000622534 PNMA8AQ86V59 439 aaPredicted RBP17.18■□□□□ 0.34
GTF3C2-214ENST00000622534 METTL16Q86W50 562 aaKnown RBP17.18■□□□□ 0.34
GTF3C2-214ENST00000622534 ZFPM1Q8IX07 1006 aa17.18■□□□□ 0.34
GTF3C2-214ENST00000622534 TAF1DQ9H5J8 278 aaPredicted RBP17.18■□□□□ 0.34
GTF3C2-214ENST00000622534 PGAP2Q9UHJ9 254 aa17.18■□□□□ 0.34
GTF3C2-214ENST00000622534 BAZ2AQ9UIF9 1905 aaKnown RBP17.17■□□□□ 0.34
GTF3C2-214ENST00000622534 CYP2D7A0A087X1C5 515 aa17.17■□□□□ 0.34
GTF3C2-214ENST00000622534 HLA-DOAP06340 250 aa17.17■□□□□ 0.34
GTF3C2-214ENST00000622534 HMGB1P09429 215 aaKnown RBP17.17■□□□□ 0.34
GTF3C2-214ENST00000622534 PLCD1P51178 756 aa17.17■□□□□ 0.34
GTF3C2-214ENST00000622534 CTDSPL2Q05D32 466 aa17.17■□□□□ 0.34
GTF3C2-214ENST00000622534 RABEP1Q15276 862 aa17.17■□□□□ 0.34
GTF3C2-214ENST00000622534 SH3BP5LQ7L8J4 393 aa17.17■□□□□ 0.34
GTF3C2-214ENST00000622534 CNNM2Q9H8M5 875 aa17.17■□□□□ 0.34
GTF3C2-214ENST00000622534 ZSWIM6Q9HCJ5 1215 aa17.17■□□□□ 0.34
GTF3C2-214ENST00000622534 PI4KBQ9UBF8 816 aa17.17■□□□□ 0.34
GTF3C2-214ENST00000622534 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.17■□□□□ 0.34
GTF3C2-214ENST00000622534 PPP2R3BQ9Y5P8 575 aa17.17■□□□□ 0.34
GTF3C2-214ENST00000622534 MYH1P12882 1939 aa17.17■□□□□ 0.34
GTF3C2-214ENST00000622534 ORC4O43929 436 aa17.16■□□□□ 0.34
GTF3C2-214ENST00000622534 GABPAQ06546 454 aa17.16■□□□□ 0.34
GTF3C2-214ENST00000622534 TCP10Q12799 353 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 198.8 ms