RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-219	ENST00000622171	SUPT20HL1	Q3ZLR7	823 aa		5.49	□□□□□ -1.53
LINC00649-219	ENST00000622171	ERICH6	Q7L0X2	663 aa		5.49	□□□□□ -1.53
LINC00649-219	ENST00000622171	IFNL1	Q8IU54	200 aa		5.49	□□□□□ -1.53
LINC00649-219	ENST00000622171	SIRT2	Q8IXJ6	389 aa		5.49	□□□□□ -1.53
LINC00649-219	ENST00000622171	TEX11	Q8IYF3	940 aa		5.49	□□□□□ -1.53
LINC00649-219	ENST00000622171	ANKRD13A	Q8IZ07	590 aa		5.49	□□□□□ -1.53
LINC00649-219	ENST00000622171	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	5.49	□□□□□ -1.53
LINC00649-219	ENST00000622171	SSH3	Q8TE77	659 aa		5.49	□□□□□ -1.53
LINC00649-219	ENST00000622171	PCDH10	Q9P2E7	1040 aa		5.49	□□□□□ -1.53
LINC00649-219	ENST00000622171	LRP2BP	Q9P2M1	347 aa		5.49	□□□□□ -1.53
LINC00649-219	ENST00000622171	CSAD	Q9Y600	493 aa		5.49	□□□□□ -1.53
LINC00649-219	ENST00000622171	RFX7	Q2KHR2	1363 aa		5.49	□□□□□ -1.53
LINC00649-219	ENST00000622171	COL11A1	P12107	1806 aa	Predicted RBP	5.48	□□□□□ -1.53
LINC00649-219	ENST00000622171	ATRNL1	Q5VV63	1379 aa		5.48	□□□□□ -1.53
LINC00649-219	ENST00000622171	TRIM75P	A6NK02	468 aa		5.48	□□□□□ -1.53
LINC00649-219	ENST00000622171	SMIM22	K7EJ46	135 aa		5.48	□□□□□ -1.53
LINC00649-219	ENST00000622171	GPR25	O00155	361 aa		5.48	□□□□□ -1.53
LINC00649-219	ENST00000622171	IRF6	O14896	467 aa		5.48	□□□□□ -1.53
LINC00649-219	ENST00000622171	GDF11	O95390	407 aa		5.48	□□□□□ -1.53
LINC00649-219	ENST00000622171	MAP4K4	O95819	1239 aa	Predicted RBP	5.48	□□□□□ -1.53
LINC00649-219	ENST00000622171	CYP2E1	P05181	493 aa	Predicted RBP	5.48	□□□□□ -1.53
LINC00649-219	ENST00000622171	ARID4A	P29374	1257 aa	Predicted RBP	5.48	□□□□□ -1.53
LINC00649-219	ENST00000622171	MAP3K9	P80192	1104 aa		5.48	□□□□□ -1.53
LINC00649-219	ENST00000622171	SREBF2	Q12772	1141 aa		5.48	□□□□□ -1.53
LINC00649-219	ENST00000622171	RRP1B	Q14684	758 aa	Known RBP	5.48	□□□□□ -1.53
LINC00649-219	ENST00000622171	TAF1C	Q15572	869 aa	Predicted RBP	5.48	□□□□□ -1.53
LINC00649-219	ENST00000622171	HHIPL2	Q6UWX4	724 aa		5.48	□□□□□ -1.53
LINC00649-219	ENST00000622171	GADL1	Q6ZQY3	521 aa		5.48	□□□□□ -1.53
LINC00649-219	ENST00000622171	STK11IP	Q8N1F8	1099 aa		5.48	□□□□□ -1.53
LINC00649-219	ENST00000622171	MAGEB6	Q8N7X4	407 aa		5.48	□□□□□ -1.53
LINC00649-219	ENST00000622171	TGFBRAP1	Q8WUH2	860 aa		5.48	□□□□□ -1.53
LINC00649-219	ENST00000622171	NSUN4	Q96CB9	384 aa	Known RBP	5.48	□□□□□ -1.53
LINC00649-219	ENST00000622171	ZNF341	Q9BYN7	854 aa		5.48	□□□□□ -1.53
LINC00649-219	ENST00000622171	CPA4	Q9UI42	421 aa		5.48	□□□□□ -1.53
LINC00649-219	ENST00000622171	AKAP2	Q9Y2D5	859 aa		5.48	□□□□□ -1.53
LINC00649-219	ENST00000622171	TRIM17	Q9Y577	477 aa		5.48	□□□□□ -1.53
LINC00649-219	ENST00000622171	PPP2R3B	Q9Y5P8	575 aa		5.48	□□□□□ -1.53
LINC00649-219	ENST00000622171	MYH4	Q9Y623	1939 aa		5.48	□□□□□ -1.53
LINC00649-219	ENST00000622171	GAK	O14976	1311 aa		5.48	□□□□□ -1.53
LINC00649-219	ENST00000622171	PLXNB2	O15031	1838 aa		5.47	□□□□□ -1.53
LINC00649-219	ENST00000622171	MANSC4	A6NHS7	340 aa	Predicted RBP	5.47	□□□□□ -1.53
LINC00649-219	ENST00000622171	BTBD19	C9JJ37	291 aa		5.47	□□□□□ -1.53
LINC00649-219	ENST00000622171	GOLIM4	O00461	696 aa		5.47	□□□□□ -1.53
LINC00649-219	ENST00000622171	CA12	O43570	354 aa		5.47	□□□□□ -1.53
LINC00649-219	ENST00000622171	FKTN	O75072	461 aa		5.47	□□□□□ -1.53
LINC00649-219	ENST00000622171	CYP2C8	P10632	490 aa		5.47	□□□□□ -1.53
LINC00649-219	ENST00000622171	CYP2D6	P10635	497 aa		5.47	□□□□□ -1.53
LINC00649-219	ENST00000622171	CYP7A1	P22680	504 aa		5.47	□□□□□ -1.53
LINC00649-219	ENST00000622171	RHBDL3	P58872	404 aa		5.47	□□□□□ -1.53
LINC00649-219	ENST00000622171	JAG1	P78504	1218 aa		5.47	□□□□□ -1.53
LINC00649-219	ENST00000622171	ZYX	Q15942	572 aa	Known RBP	5.47	□□□□□ -1.53
LINC00649-219	ENST00000622171	MAP3K11	Q16584	847 aa		5.47	□□□□□ -1.53
LINC00649-219	ENST00000622171	NAA16	Q6N069	864 aa	Predicted RBP	5.47	□□□□□ -1.53
LINC00649-219	ENST00000622171	CTU1	Q7Z7A3	348 aa	Known RBP	5.47	□□□□□ -1.53
LINC00649-219	ENST00000622171	CLEC10A	Q8IUN9	316 aa		5.47	□□□□□ -1.53
LINC00649-219	ENST00000622171	RHPN1	Q8TCX5	695 aa		5.47	□□□□□ -1.53
LINC00649-219	ENST00000622171	OTUD7A	Q8TE49	926 aa	Predicted RBP	5.47	□□□□□ -1.53
LINC00649-219	ENST00000622171	FAM151A	Q8WW52	585 aa		5.47	□□□□□ -1.53
LINC00649-219	ENST00000622171	MS4A4A	Q96JQ5	239 aa		5.47	□□□□□ -1.53
LINC00649-219	ENST00000622171	CRBN	Q96SW2	442 aa		5.47	□□□□□ -1.53
LINC00649-219	ENST00000622171	PALD1	Q9ULE6	856 aa		5.47	□□□□□ -1.53
LINC00649-219	ENST00000622171	HPS5	Q9UPZ3	1129 aa		5.47	□□□□□ -1.53
LINC00649-219	ENST00000622171	RBBP6	Q7Z6E9	1792 aa	Known RBP	5.47	□□□□□ -1.53
LINC00649-219	ENST00000622171	SALL1	Q9NSC2	1324 aa		5.47	□□□□□ -1.53
LINC00649-219	ENST00000622171	ALPK3	Q96L96	1907 aa		5.46	□□□□□ -1.53
LINC00649-219	ENST00000622171	PARP14	Q460N5	1801 aa		5.46	□□□□□ -1.53
LINC00649-219	ENST00000622171	RPAP1	Q9BWH6	1393 aa	Predicted RBP	5.46	□□□□□ -1.54
LINC00649-219	ENST00000622171	CYP2D7	A0A087X1C5	515 aa		5.46	□□□□□ -1.54
LINC00649-219	ENST00000622171	SPDYE5	A6NIY4	337 aa		5.46	□□□□□ -1.54
LINC00649-219	ENST00000622171	SEMA3E	O15041	775 aa		5.46	□□□□□ -1.54
LINC00649-219	ENST00000622171	ZBTB48	P10074	688 aa	Predicted RBP	5.46	□□□□□ -1.54
LINC00649-219	ENST00000622171	CTGF	P29279	349 aa		5.46	□□□□□ -1.54
LINC00649-219	ENST00000622171	TM4SF4	P48230	202 aa		5.46	□□□□□ -1.54
LINC00649-219	ENST00000622171	HDLBP	Q00341	1268 aa	Known RBP	5.46	□□□□□ -1.54
LINC00649-219	ENST00000622171	CCDC158	Q5M9N0	1113 aa		5.46	□□□□□ -1.54
LINC00649-219	ENST00000622171	TREML2	Q5T2D2	321 aa		5.46	□□□□□ -1.54
LINC00649-219	ENST00000622171	DCAF15	Q66K64	600 aa		5.46	□□□□□ -1.54
LINC00649-219	ENST00000622171	SAMD1	Q6SPF0	538 aa	Predicted RBP	5.46	□□□□□ -1.54
LINC00649-219	ENST00000622171	OTOP1	Q7RTM1	612 aa		5.46	□□□□□ -1.54
LINC00649-219	ENST00000622171	SH3TC2	Q8TF17	1288 aa		5.46	□□□□□ -1.54
LINC00649-219	ENST00000622171	CHMP4C	Q96CF2	233 aa		5.46	□□□□□ -1.54
LINC00649-219	ENST00000622171	BOLA2	Q9H3K6	86 aa		5.46	□□□□□ -1.54
LINC00649-219	ENST00000622171	DNAJC18	Q9H819	358 aa		5.46	□□□□□ -1.54
LINC00649-219	ENST00000622171	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	5.46	□□□□□ -1.54
LINC00649-219	ENST00000622171	SAGE1	Q9NXZ1	904 aa		5.46	□□□□□ -1.54
LINC00649-219	ENST00000622171	FBXO3	Q9UK99	471 aa		5.46	□□□□□ -1.54
LINC00649-219	ENST00000622171	TAOK2	Q9UL54	1235 aa		5.46	□□□□□ -1.54
LINC00649-219	ENST00000622171	HDAC5	Q9UQL6	1122 aa		5.46	□□□□□ -1.54
LINC00649-219	ENST00000622171	PTCH2	Q9Y6C5	1203 aa		5.46	□□□□□ -1.54
LINC00649-219	ENST00000622171	ZHX2	Q9Y6X8	837 aa		5.46	□□□□□ -1.54
LINC00649-219	ENST00000622171	FLT1	P17948	1338 aa		5.46	□□□□□ -1.54
LINC00649-219	ENST00000622171	MCM3AP	O60318	1980 aa		5.46	□□□□□ -1.54
LINC00649-219	ENST00000622171	ZNFX1	Q9P2E3	1918 aa	Known RBP	5.45	□□□□□ -1.54
LINC00649-219	ENST00000622171	GPR75-ASB3	A0A0A6YYF3	556 aa		5.45	□□□□□ -1.54
LINC00649-219	ENST00000622171	POTEF	A5A3E0	1075 aa		5.45	□□□□□ -1.54
LINC00649-219	ENST00000622171	PHF20L1	A8MW92	1017 aa		5.45	□□□□□ -1.54
LINC00649-219	ENST00000622171	PDHX	O00330	501 aa		5.45	□□□□□ -1.54
LINC00649-219	ENST00000622171	PRKAB2	O43741	272 aa		5.45	□□□□□ -1.54
LINC00649-219	ENST00000622171	IFIT2	P09913	472 aa	Known RBP	5.45	□□□□□ -1.54
LINC00649-219	ENST00000622171	UQCRFS1P1	P0C7P4	283 aa		5.45	□□□□□ -1.54

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms