RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 SLC26A6Q9BXS9 759 aa14.6□□□□□ -0.07
SCAMP1-207ENST00000621999 CRY2Q49AN0 593 aa14.6□□□□□ -0.07
SCAMP1-207ENST00000621999 ORC3Q9UBD5 711 aaPredicted RBP14.6□□□□□ -0.07
SCAMP1-207ENST00000621999 CD2APQ9Y5K6 639 aa14.6□□□□□ -0.07
SCAMP1-207ENST00000621999 NSUN4Q96CB9 384 aaKnown RBP14.6□□□□□ -0.07
SCAMP1-207ENST00000621999 SEC63Q9UGP8 760 aaKnown RBP14.6□□□□□ -0.07
SCAMP1-207ENST00000621999 RTL9Q8NET4 1388 aa14.59□□□□□ -0.07
SCAMP1-207ENST00000621999 ITGB4P16144 1822 aa14.59□□□□□ -0.07
SCAMP1-207ENST00000621999 KIF5BP33176 963 aa14.59□□□□□ -0.07
SCAMP1-207ENST00000621999 MYL10Q9BUA6 226 aa14.59□□□□□ -0.07
SCAMP1-207ENST00000621999 DDX49Q9Y6V7 483 aaKnown RBP14.59□□□□□ -0.07
SCAMP1-207ENST00000621999 GJB2P29033 226 aa14.59□□□□□ -0.07
SCAMP1-207ENST00000621999 PLCB2Q00722 1185 aa14.59□□□□□ -0.07
SCAMP1-207ENST00000621999 ZYXQ15942 572 aaKnown RBP14.59□□□□□ -0.07
SCAMP1-207ENST00000621999 RTN1Q16799 776 aa14.59□□□□□ -0.07
SCAMP1-207ENST00000621999 VGLL2Q8N8G2 317 aa14.59□□□□□ -0.07
SCAMP1-207ENST00000621999 SSRP1Q08945 709 aaKnown RBP14.59□□□□□ -0.07
SCAMP1-207ENST00000621999 TNFAIP1Q13829 316 aa14.59□□□□□ -0.07
SCAMP1-207ENST00000621999 STRIP1Q5VSL9 837 aa14.59□□□□□ -0.07
SCAMP1-207ENST00000621999 FIBPO43427 364 aa14.58□□□□□ -0.07
SCAMP1-207ENST00000621999 RASSF7Q02833 373 aa14.58□□□□□ -0.08
SCAMP1-207ENST00000621999 C8orf76Q96K31 380 aa14.58□□□□□ -0.08
SCAMP1-207ENST00000621999 CSRNP1Q96S65 589 aa14.58□□□□□ -0.08
SCAMP1-207ENST00000621999 WDR33Q9C0J8 1336 aaKnown RBP14.58□□□□□ -0.08
SCAMP1-207ENST00000621999 ZNF512BQ96KM6 892 aaPredicted RBP14.58□□□□□ -0.08
SCAMP1-207ENST00000621999 CRYBG1Q9Y4K1 1723 aa14.58□□□□□ -0.08
SCAMP1-207ENST00000621999 PSMD14O00487 310 aa14.58□□□□□ -0.08
SCAMP1-207ENST00000621999 DYNLL2Q96FJ2 89 aa14.58□□□□□ -0.08
SCAMP1-207ENST00000621999 ANGEL1Q9UNK9 670 aaKnown RBP14.58□□□□□ -0.08
SCAMP1-207ENST00000621999 KIAA2012Q0VF49 1180 aa14.57□□□□□ -0.08
SCAMP1-207ENST00000621999 BICD2Q8TD16 824 aa14.57□□□□□ -0.08
SCAMP1-207ENST00000621999 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.57□□□□□ -0.08
SCAMP1-207ENST00000621999 NCOA5Q9HCD5 579 aaKnown RBP14.57□□□□□ -0.08
SCAMP1-207ENST00000621999 CCDC178Q5BJE1 867 aa14.57□□□□□ -0.08
SCAMP1-207ENST00000621999 WASF1Q92558 559 aa14.57□□□□□ -0.08
SCAMP1-207ENST00000621999 C5P01031 1676 aa14.57□□□□□ -0.08
SCAMP1-207ENST00000621999 SULF1Q8IWU6 871 aa14.57□□□□□ -0.08
SCAMP1-207ENST00000621999 INCENPQ9NQS7 918 aa14.57□□□□□ -0.08
SCAMP1-207ENST00000621999 CYP2D6P10635 497 aa14.56□□□□□ -0.08
SCAMP1-207ENST00000621999 HMGN5P82970 282 aaKnown RBP14.56□□□□□ -0.08
SCAMP1-207ENST00000621999 DCPSQ96C86 337 aaKnown RBP14.56□□□□□ -0.08
SCAMP1-207ENST00000621999 MROH7-TTC4A0A0A0MT08 1334 aa14.56□□□□□ -0.08
SCAMP1-207ENST00000621999 NRAPQ86VF7 1730 aa14.56□□□□□ -0.08
SCAMP1-207ENST00000621999 BTAF1O14981 1849 aa14.56□□□□□ -0.08
SCAMP1-207ENST00000621999 SLC51AQ86UW1 340 aa14.56□□□□□ -0.08
SCAMP1-207ENST00000621999 TMEM87BQ96K49 555 aa14.56□□□□□ -0.08
SCAMP1-207ENST00000621999 IL25Q9H293 177 aa14.56□□□□□ -0.08
SCAMP1-207ENST00000621999 KCNQ5Q9NR82 932 aa14.56□□□□□ -0.08
SCAMP1-207ENST00000621999 WDR78Q5VTH9 848 aa14.56□□□□□ -0.08
SCAMP1-207ENST00000621999 MIGA2Q7L4E1 593 aa14.56□□□□□ -0.08
SCAMP1-207ENST00000621999 SCAF8Q9UPN6 1271 aaKnown RBP14.56□□□□□ -0.08
SCAMP1-207ENST00000621999 MYO3BQ8WXR4 1341 aa14.55□□□□□ -0.08
SCAMP1-207ENST00000621999 SALL3Q9BXA9 1300 aa14.55□□□□□ -0.08
SCAMP1-207ENST00000621999 AFDNP55196 1824 aaKnown RBP14.55□□□□□ -0.08
SCAMP1-207ENST00000621999 EPB41L2O43491 1005 aaKnown RBP14.55□□□□□ -0.08
SCAMP1-207ENST00000621999 NECTIN1Q15223 517 aa14.55□□□□□ -0.08
SCAMP1-207ENST00000621999 PODXL2Q9NZ53 605 aa14.55□□□□□ -0.08
SCAMP1-207ENST00000621999 NLGN2Q8NFZ4 835 aa14.55□□□□□ -0.08
SCAMP1-207ENST00000621999 SNX21Q969T3 373 aa14.55□□□□□ -0.08
SCAMP1-207ENST00000621999 CLIP2Q9UDT6 1046 aa14.55□□□□□ -0.08
SCAMP1-207ENST00000621999 SERPINB13Q9UIV8 391 aa14.55□□□□□ -0.08
SCAMP1-207ENST00000621999 DAGLAQ9Y4D2 1042 aa14.55□□□□□ -0.08
SCAMP1-207ENST00000621999 DDX11L8A8MPP1 907 aa14.54□□□□□ -0.08
SCAMP1-207ENST00000621999 MED23Q9ULK4 1368 aa14.54□□□□□ -0.08
SCAMP1-207ENST00000621999 FAM196BA6NMK8 535 aa14.54□□□□□ -0.08
SCAMP1-207ENST00000621999 CERKLQ49MI3 558 aaPredicted RBP14.54□□□□□ -0.08
SCAMP1-207ENST00000621999 DCP1AQ9NPI6 582 aaPredicted RBP14.54□□□□□ -0.08
SCAMP1-207ENST00000621999 CNOT7Q9UIV1 285 aaKnown RBP14.54□□□□□ -0.08
SCAMP1-207ENST00000621999 GSG1L2A8MUP6 293 aa14.54□□□□□ -0.08
SCAMP1-207ENST00000621999 TM6SF1Q9BZW5 370 aa14.54□□□□□ -0.08
SCAMP1-207ENST00000621999 TCEAL9Q9UHQ7 104 aa14.54□□□□□ -0.08
SCAMP1-207ENST00000621999 NLRP5P59047 1200 aa14.54□□□□□ -0.08
SCAMP1-207ENST00000621999 GPCPD1Q9NPB8 672 aa14.54□□□□□ -0.08
SCAMP1-207ENST00000621999 PICK1Q9NRD5 415 aa14.54□□□□□ -0.08
SCAMP1-207ENST00000621999 STK38Q15208 465 aa14.53□□□□□ -0.08
SCAMP1-207ENST00000621999 RSBN1LQ6PCB5 846 aaPredicted RBP14.53□□□□□ -0.08
SCAMP1-207ENST00000621999 MICALL2Q8IY33 904 aa14.53□□□□□ -0.08
SCAMP1-207ENST00000621999 ZSWIM6Q9HCJ5 1215 aa14.53□□□□□ -0.08
SCAMP1-207ENST00000621999 PRPF40AO75400 957 aaKnown RBP14.53□□□□□ -0.08
SCAMP1-207ENST00000621999 PTMSP20962 102 aa14.53□□□□□ -0.08
SCAMP1-207ENST00000621999 TNKSO95271 1327 aa14.53□□□□□ -0.08
SCAMP1-207ENST00000621999 GRIN3BO60391 1043 aa14.53□□□□□ -0.08
SCAMP1-207ENST00000621999 LMNB1P20700 586 aa14.53□□□□□ -0.08
SCAMP1-207ENST00000621999 CXCL9Q07325 125 aa14.53□□□□□ -0.08
SCAMP1-207ENST00000621999 SLC44A5Q8NCS7 719 aa14.53□□□□□ -0.08
SCAMP1-207ENST00000621999 RIC1Q4ADV7 1423 aa14.52□□□□□ -0.08
SCAMP1-207ENST00000621999 SYAP1Q96A49 352 aaPredicted RBP14.52□□□□□ -0.08
SCAMP1-207ENST00000621999 GDF11O95390 407 aa14.52□□□□□ -0.09
SCAMP1-207ENST00000621999 GMPSP49915 693 aaPredicted RBP14.52□□□□□ -0.09
SCAMP1-207ENST00000621999 PPP4R3BQ5MIZ7 849 aa14.52□□□□□ -0.09
SCAMP1-207ENST00000621999 ALG1Q9BT22 464 aa14.52□□□□□ -0.09
SCAMP1-207ENST00000621999 TOGARAM1Q9Y4F4 1720 aa14.52□□□□□ -0.09
SCAMP1-207ENST00000621999 STX6O43752 255 aa14.51□□□□□ -0.09
SCAMP1-207ENST00000621999 CALM1P0DP23 149 aa14.51□□□□□ -0.09
SCAMP1-207ENST00000621999 CALM2P0DP24 149 aa14.51□□□□□ -0.09
SCAMP1-207ENST00000621999 CALM3P0DP25 149 aa14.51□□□□□ -0.09
SCAMP1-207ENST00000621999 SAMD7Q7Z3H4 446 aa14.51□□□□□ -0.09
SCAMP1-207ENST00000621999 SYT17Q9BSW7 474 aa14.51□□□□□ -0.09
SCAMP1-207ENST00000621999 ZSWIM5Q9P217 1185 aa14.51□□□□□ -0.09
SCAMP1-207ENST00000621999 PTPDC1A2A3K4 754 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms