RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 CD163L1Q9NR16 1453 aa10.56□□□□□ -0.72
CBWD1-228ENST00000619157 PHRF1Q9P1Y6 1649 aaKnown RBP10.56□□□□□ -0.72
CBWD1-228ENST00000619157 MED26O95402 600 aa10.56□□□□□ -0.72
CBWD1-228ENST00000619157 PSAPP07602 524 aa10.56□□□□□ -0.72
CBWD1-228ENST00000619157 TMEM130Q8N3G9 435 aa10.56□□□□□ -0.72
CBWD1-228ENST00000619157 LRFN2Q9ULH4 789 aa10.56□□□□□ -0.72
CBWD1-228ENST00000619157 USP6P35125 1406 aa10.56□□□□□ -0.72
CBWD1-228ENST00000619157 CDK12Q9NYV4 1490 aaPredicted RBP10.55□□□□□ -0.72
CBWD1-228ENST00000619157 PLCH1Q4KWH8 1693 aa10.55□□□□□ -0.72
CBWD1-228ENST00000619157 ST20-MTHFSA0A0A6YYL1 179 aa10.55□□□□□ -0.72
CBWD1-228ENST00000619157 FAM83GA6ND36 823 aa10.55□□□□□ -0.72
CBWD1-228ENST00000619157 TGFB1P01137 390 aa10.55□□□□□ -0.72
CBWD1-228ENST00000619157 NUTM2GQ5VZR2 741 aa10.55□□□□□ -0.72
CBWD1-228ENST00000619157 TREML1Q86YW5 311 aa10.55□□□□□ -0.72
CBWD1-228ENST00000619157 C11orf16Q9NQ32 467 aa10.55□□□□□ -0.72
CBWD1-228ENST00000619157 CPSF1Q10570 1443 aaKnown RBP10.55□□□□□ -0.72
CBWD1-228ENST00000619157 GLI3P10071 1580 aa10.55□□□□□ -0.72
CBWD1-228ENST00000619157 FAM196BA6NMK8 535 aa10.54□□□□□ -0.72
CBWD1-228ENST00000619157 PAX4O43316 350 aa10.54□□□□□ -0.72
CBWD1-228ENST00000619157 PTCD1O75127 700 aaKnown RBP10.54□□□□□ -0.72
CBWD1-228ENST00000619157 RXRBP28702 533 aa10.54□□□□□ -0.72
CBWD1-228ENST00000619157 WEE1P30291 646 aa10.54□□□□□ -0.72
CBWD1-228ENST00000619157 RBM6P78332 1123 aaKnown RBP10.54□□□□□ -0.72
CBWD1-228ENST00000619157 NRKQ7Z2Y5 1582 aa10.54□□□□□ -0.72
CBWD1-228ENST00000619157 MYO19Q96H55 970 aa10.54□□□□□ -0.72
CBWD1-228ENST00000619157 PPP1R12CQ9BZL4 782 aa10.54□□□□□ -0.72
CBWD1-228ENST00000619157 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.54□□□□□ -0.72
CBWD1-228ENST00000619157 RAXQ9Y2V3 346 aa10.54□□□□□ -0.72
CBWD1-228ENST00000619157 USP19O94966 1318 aa10.54□□□□□ -0.72
CBWD1-228ENST00000619157 PIK3C2AO00443 1686 aa10.53□□□□□ -0.72
CBWD1-228ENST00000619157 EP400Q96L91 3159 aa10.53□□□□□ -0.72
CBWD1-228ENST00000619157 NRAPQ86VF7 1730 aa10.53□□□□□ -0.72
CBWD1-228ENST00000619157 EGFRP00533 1210 aa10.53□□□□□ -0.72
CBWD1-228ENST00000619157 Q6ZS46 218 aa10.53□□□□□ -0.72
CBWD1-228ENST00000619157 ARXQ96QS3 562 aa10.53□□□□□ -0.72
CBWD1-228ENST00000619157 KCNMB2Q9Y691 235 aa10.53□□□□□ -0.72
CBWD1-228ENST00000619157 USP47Q96K76 1375 aa10.52□□□□□ -0.72
CBWD1-228ENST00000619157 AKAP12Q02952 1782 aa10.52□□□□□ -0.72
CBWD1-228ENST00000619157 WISP1O95388 367 aa10.52□□□□□ -0.73
CBWD1-228ENST00000619157 IRAK1P51617 712 aa10.52□□□□□ -0.73
CBWD1-228ENST00000619157 TXNDC11Q6PKC3 985 aa10.52□□□□□ -0.73
CBWD1-228ENST00000619157 UNC5CLQ8IV45 518 aa10.52□□□□□ -0.73
CBWD1-228ENST00000619157 CCER1Q8TC90 406 aaPredicted RBP10.52□□□□□ -0.73
CBWD1-228ENST00000619157 UBL7Q96S82 380 aaPredicted RBP10.52□□□□□ -0.73
CBWD1-228ENST00000619157 RBSNQ9H1K0 784 aa10.52□□□□□ -0.73
CBWD1-228ENST00000619157 TRPC5Q9UL62 973 aaPredicted RBP10.52□□□□□ -0.73
CBWD1-228ENST00000619157 TIMELESSQ9UNS1 1208 aa10.52□□□□□ -0.73
CBWD1-228ENST00000619157 OAS3Q9Y6K5 1087 aaKnown RBP10.52□□□□□ -0.73
CBWD1-228ENST00000619157 KIAA0232Q92628 1395 aa10.52□□□□□ -0.73
CBWD1-228ENST00000619157 NWD2Q9ULI1 1742 aa10.51□□□□□ -0.73
CBWD1-228ENST00000619157 KRTAP4-8A0A0G2JLE6 195 aa10.51□□□□□ -0.73
CBWD1-228ENST00000619157 IGLV1-40P01703 118 aa10.51□□□□□ -0.73
CBWD1-228ENST00000619157 LMOD1P29536 600 aaPredicted RBP10.51□□□□□ -0.73
CBWD1-228ENST00000619157 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.51□□□□□ -0.73
CBWD1-228ENST00000619157 VRTNQ9H8Y1 702 aa10.51□□□□□ -0.73
CBWD1-228ENST00000619157 SLIT3O75094 1523 aa10.51□□□□□ -0.73
CBWD1-228ENST00000619157 MON2Q7Z3U7 1717 aa10.5□□□□□ -0.73
CBWD1-228ENST00000619157 COL14A1Q05707 1796 aaKnown RBP10.5□□□□□ -0.73
CBWD1-228ENST00000619157 SLC51AQ86UW1 340 aa10.5□□□□□ -0.73
CBWD1-228ENST00000619157 ABTB2Q8N961 1025 aa10.5□□□□□ -0.73
CBWD1-228ENST00000619157 GALNT11Q8NCW6 608 aa10.5□□□□□ -0.73
CBWD1-228ENST00000619157 SLC12A5Q9H2X9 1139 aa10.5□□□□□ -0.73
CBWD1-228ENST00000619157 SRA1Q9HD15 236 aaKnown RBP10.5□□□□□ -0.73
CBWD1-228ENST00000619157 STOML1Q9UBI4 398 aa10.5□□□□□ -0.73
CBWD1-228ENST00000619157 TTC21BQ7Z4L5 1316 aa10.5□□□□□ -0.73
CBWD1-228ENST00000619157 LMO7Q8WWI1 1683 aa10.5□□□□□ -0.73
CBWD1-228ENST00000619157 BRD4O60885 1362 aaPredicted RBP10.5□□□□□ -0.73
CBWD1-228ENST00000619157 LINC01387J3KSC0 135 aa10.49□□□□□ -0.73
CBWD1-228ENST00000619157 ZC3H6P61129 1189 aaKnown RBP10.49□□□□□ -0.73
CBWD1-228ENST00000619157 TRIP4Q15650 581 aaPredicted RBP10.49□□□□□ -0.73
CBWD1-228ENST00000619157 CHRNA2Q15822 529 aa10.49□□□□□ -0.73
CBWD1-228ENST00000619157 VPS72Q15906 364 aa10.49□□□□□ -0.73
CBWD1-228ENST00000619157 MAP4K3Q8IVH8 894 aa10.49□□□□□ -0.73
CBWD1-228ENST00000619157 CALR3Q96L12 384 aaKnown RBP10.49□□□□□ -0.73
CBWD1-228ENST00000619157 BTG4Q9NY30 223 aa10.49□□□□□ -0.73
CBWD1-228ENST00000619157 A0A1W2PP64 1363 aa10.49□□□□□ -0.73
CBWD1-228ENST00000619157 CAMTA1Q9Y6Y1 1673 aa10.48□□□□□ -0.73
CBWD1-228ENST00000619157 COBLO75128 1261 aa10.48□□□□□ -0.73
CBWD1-228ENST00000619157 GCP02774 474 aa10.48□□□□□ -0.73
CBWD1-228ENST00000619157 CDC25BP30305 580 aa10.48□□□□□ -0.73
CBWD1-228ENST00000619157 GP2P55259 537 aaKnown RBP10.48□□□□□ -0.73
CBWD1-228ENST00000619157 COX20Q5RI15 118 aa10.48□□□□□ -0.73
CBWD1-228ENST00000619157 PUS7Q96PZ0 661 aaKnown RBP10.48□□□□□ -0.73
CBWD1-228ENST00000619157 LACRTQ9GZZ8 138 aa10.48□□□□□ -0.73
CBWD1-228ENST00000619157 PPME1Q9Y570 386 aa10.48□□□□□ -0.73
CBWD1-228ENST00000619157 CPDO75976 1380 aa10.48□□□□□ -0.73
CBWD1-228ENST00000619157 KTN1Q86UP2 1357 aaKnown RBP10.48□□□□□ -0.73
CBWD1-228ENST00000619157 KIAA1324LA8MWY0 1029 aaPredicted RBP10.47□□□□□ -0.73
CBWD1-228ENST00000619157 SOX18P35713 384 aa10.47□□□□□ -0.73
CBWD1-228ENST00000619157 ATP11AP98196 1134 aa10.47□□□□□ -0.73
CBWD1-228ENST00000619157 ACAD11Q709F0 780 aa10.47□□□□□ -0.73
CBWD1-228ENST00000619157 ARMC10Q8N2F6 343 aa10.47□□□□□ -0.73
CBWD1-228ENST00000619157 PRDM11Q9NQV5 511 aa10.47□□□□□ -0.73
CBWD1-228ENST00000619157 KCNK4Q9NYG8 393 aa10.47□□□□□ -0.73
CBWD1-228ENST00000619157 GSC2O15499 205 aa10.46□□□□□ -0.73
CBWD1-228ENST00000619157 HOXD8P13378 290 aaPredicted RBP10.46□□□□□ -0.73
CBWD1-228ENST00000619157 TAL1P17542 331 aaPredicted RBP10.46□□□□□ -0.73
CBWD1-228ENST00000619157 TXKP42681 527 aa10.46□□□□□ -0.73
CBWD1-228ENST00000619157 FKBP5Q13451 457 aaPredicted RBP10.46□□□□□ -0.73
CBWD1-228ENST00000619157 NLRP13Q86W25 1043 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms