RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 AK7Q96M32 723 aa12.97□□□□□ -0.33
TP53-223ENST00000618944 USP27XA6NNY8 438 aa12.96□□□□□ -0.33
TP53-223ENST00000618944 SMC2O95347 1197 aa12.96□□□□□ -0.33
TP53-223ENST00000618944 CYP7A1P22680 504 aa12.96□□□□□ -0.33
TP53-223ENST00000618944 GTF2F1P35269 517 aaKnown RBP eCLIP12.96□□□□□ -0.33
TP53-223ENST00000618944 GYG1P46976 350 aa12.96□□□□□ -0.33
TP53-223ENST00000618944 NUP133Q8WUM0 1156 aa12.96□□□□□ -0.33
TP53-223ENST00000618944 SDR42E1Q8WUS8 393 aa12.96□□□□□ -0.33
TP53-223ENST00000618944 MAP3K14Q99558 947 aa12.96□□□□□ -0.33
TP53-223ENST00000618944 NACAP1Q9BZK3 213 aa12.96□□□□□ -0.33
TP53-223ENST00000618944 NUTM2BA6NNL0 878 aaPredicted RBP12.96□□□□□ -0.34
TP53-223ENST00000618944 NUTM2EB1AL46 878 aaPredicted RBP12.96□□□□□ -0.34
TP53-223ENST00000618944 BTBD18B2RXH4 712 aa12.96□□□□□ -0.34
TP53-223ENST00000618944 KCNQ2O43526 872 aa12.96□□□□□ -0.34
TP53-223ENST00000618944 LIFRP42702 1097 aa12.96□□□□□ -0.34
TP53-223ENST00000618944 NLRP12P59046 1061 aa12.96□□□□□ -0.34
TP53-223ENST00000618944 PTPAQ15257 358 aa12.96□□□□□ -0.34
TP53-223ENST00000618944 ADGRA1Q86SQ6 560 aa12.96□□□□□ -0.34
TP53-223ENST00000618944 NUTM2AQ8IVF1 878 aaPredicted RBP12.96□□□□□ -0.34
TP53-223ENST00000618944 MAP7D2Q96T17 732 aa12.96□□□□□ -0.34
TP53-223ENST00000618944 KRT23Q9C075 422 aa12.96□□□□□ -0.34
TP53-223ENST00000618944 BCL2L12Q9HB09 334 aa12.96□□□□□ -0.34
TP53-223ENST00000618944 TRMT1Q9NXH9 659 aaKnown RBP12.96□□□□□ -0.34
TP53-223ENST00000618944 IFNKQ9P0W0 207 aa12.96□□□□□ -0.34
TP53-223ENST00000618944 NTSR2O95665 410 aa12.95□□□□□ -0.34
TP53-223ENST00000618944 PNOCQ13519 176 aa12.95□□□□□ -0.34
TP53-223ENST00000618944 WTAPQ15007 396 aa12.95□□□□□ -0.34
TP53-223ENST00000618944 BICDL1Q6ZP65 573 aa12.95□□□□□ -0.34
TP53-223ENST00000618944 NBPF11Q86T75 865 aa12.95□□□□□ -0.34
TP53-223ENST00000618944 CNNM2Q9H8M5 875 aa12.95□□□□□ -0.34
TP53-223ENST00000618944 RAI14Q9P0K7 980 aa12.95□□□□□ -0.34
TP53-223ENST00000618944 ATP2B1P20020 1258 aa12.94□□□□□ -0.34
TP53-223ENST00000618944 U2AF2P26368 475 aaKnown RBP eCLIP12.94□□□□□ -0.34
TP53-223ENST00000618944 LMOD1P29536 600 aaPredicted RBP12.94□□□□□ -0.34
TP53-223ENST00000618944 RBM6P78332 1123 aaKnown RBP12.94□□□□□ -0.34
TP53-223ENST00000618944 PARP10Q53GL7 1025 aa12.94□□□□□ -0.34
TP53-223ENST00000618944 C3orf67Q6ZVT6 689 aa12.94□□□□□ -0.34
TP53-223ENST00000618944 XPO4Q9C0E2 1151 aaKnown RBP12.94□□□□□ -0.34
TP53-223ENST00000618944 MYO5AQ9Y4I1 1855 aaKnown RBP12.94□□□□□ -0.34
TP53-223ENST00000618944 ERICH2A1L162 156 aa12.94□□□□□ -0.34
TP53-223ENST00000618944 FMNL1O95466 1100 aaPredicted RBP12.94□□□□□ -0.34
TP53-223ENST00000618944 RTN1Q16799 776 aa12.94□□□□□ -0.34
TP53-223ENST00000618944 LONRF3Q496Y0 759 aa12.94□□□□□ -0.34
TP53-223ENST00000618944 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.94□□□□□ -0.34
TP53-223ENST00000618944 PPP6R2O75170 966 aa12.93□□□□□ -0.34
TP53-223ENST00000618944 GNAT2P19087 354 aa12.93□□□□□ -0.34
TP53-223ENST00000618944 SART3Q15020 963 aaKnown RBP12.93□□□□□ -0.34
TP53-223ENST00000618944 ERFEQ4G0M1 354 aa12.93□□□□□ -0.34
TP53-223ENST00000618944 JMYQ8N9B5 988 aa12.93□□□□□ -0.34
TP53-223ENST00000618944 STAG1Q8WVM7 1258 aa12.93□□□□□ -0.34
TP53-223ENST00000618944 SPATA31A1Q5TZJ5 1347 aa12.93□□□□□ -0.34
TP53-223ENST00000618944 NUP98P52948 1817 aa12.93□□□□□ -0.34
TP53-223ENST00000618944 IFNAR1P17181 557 aa12.93□□□□□ -0.34
TP53-223ENST00000618944 PPARAQ07869 468 aa12.93□□□□□ -0.34
TP53-223ENST00000618944 NCAPHQ15003 741 aa12.93□□□□□ -0.34
TP53-223ENST00000618944 TMC6Q7Z403 805 aa12.93□□□□□ -0.34
TP53-223ENST00000618944 DIS3L2Q8IYB7 885 aaKnown RBP12.93□□□□□ -0.34
TP53-223ENST00000618944 HPSEQ9Y251 543 aa12.93□□□□□ -0.34
TP53-223ENST00000618944 CYP2D7A0A087X1C5 515 aa12.92□□□□□ -0.34
TP53-223ENST00000618944 hCG_1642624A0A1W2PR95 340 aa12.92□□□□□ -0.34
TP53-223ENST00000618944 ATP1A3P13637 1013 aa12.92□□□□□ -0.34
TP53-223ENST00000618944 TOB1P50616 345 aaPredicted RBP12.92□□□□□ -0.34
TP53-223ENST00000618944 CCZ1BP86790 482 aa12.92□□□□□ -0.34
TP53-223ENST00000618944 CCZ1P86791 482 aaPredicted RBP12.92□□□□□ -0.34
TP53-223ENST00000618944 GRIN1Q05586 938 aa12.92□□□□□ -0.34
TP53-223ENST00000618944 NR5A1Q13285 461 aa12.92□□□□□ -0.34
TP53-223ENST00000618944 NOSTRINQ8IVI9 506 aa12.92□□□□□ -0.34
TP53-223ENST00000618944 TRIM22Q8IYM9 498 aa12.92□□□□□ -0.34
TP53-223ENST00000618944 KCNH3Q9ULD8 1083 aa12.92□□□□□ -0.34
TP53-223ENST00000618944 MYH15Q9Y2K3 1946 aa12.92□□□□□ -0.34
TP53-223ENST00000618944 MAGEB6P1A0A0J9YX57 407 aa12.92□□□□□ -0.34
TP53-223ENST00000618944 FOXN1O15353 648 aa12.92□□□□□ -0.34
TP53-223ENST00000618944 DYNLL1P63167 89 aaKnown RBP12.92□□□□□ -0.34
TP53-223ENST00000618944 SAFBQ15424 915 aaKnown RBP eCLIP12.92□□□□□ -0.34
TP53-223ENST00000618944 RESP18Q5W5W9 173 aa12.92□□□□□ -0.34
TP53-223ENST00000618944 CEP135Q66GS9 1140 aa12.92□□□□□ -0.34
TP53-223ENST00000618944 FOXP4Q8IVH2 680 aaPredicted RBP12.92□□□□□ -0.34
TP53-223ENST00000618944 CRACR2BQ8N4Y2 399 aaPredicted RBP12.92□□□□□ -0.34
TP53-223ENST00000618944 CNNM3Q8NE01 707 aa12.92□□□□□ -0.34
TP53-223ENST00000618944 BPIFA3Q9BQP9 254 aa12.92□□□□□ -0.34
TP53-223ENST00000618944 UBAC1Q9BSL1 405 aa12.92□□□□□ -0.34
TP53-223ENST00000618944 PNPLA7Q6ZV29 1317 aa12.92□□□□□ -0.34
TP53-223ENST00000618944 SMTNL1A8MU46 457 aa12.91□□□□□ -0.34
TP53-223ENST00000618944 NEMFO60524 1076 aa12.91□□□□□ -0.34
TP53-223ENST00000618944 PRDM1O75626 825 aa12.91□□□□□ -0.34
TP53-223ENST00000618944 MMP1P03956 469 aa12.91□□□□□ -0.34
TP53-223ENST00000618944 GTF2E1P29083 439 aaPredicted RBP12.91□□□□□ -0.34
TP53-223ENST00000618944 TPM4P67936 248 aa12.91□□□□□ -0.34
TP53-223ENST00000618944 PTPN21Q16825 1174 aa12.91□□□□□ -0.34
TP53-223ENST00000618944 MTERF4Q7Z6M4 381 aaKnown RBP12.91□□□□□ -0.34
TP53-223ENST00000618944 ANKRD18AQ8IVF6 992 aa12.91□□□□□ -0.34
TP53-223ENST00000618944 FANCBQ8NB91 859 aa12.91□□□□□ -0.34
TP53-223ENST00000618944 OXER1Q8TDS5 423 aa12.91□□□□□ -0.34
TP53-223ENST00000618944 WASF1Q92558 559 aa12.91□□□□□ -0.34
TP53-223ENST00000618944 NHSL1Q5SYE7 1610 aa12.91□□□□□ -0.34
TP53-223ENST00000618944 CUTAO60888 179 aa12.91□□□□□ -0.34
TP53-223ENST00000618944 NAA30Q147X3 362 aaPredicted RBP12.91□□□□□ -0.34
TP53-223ENST00000618944 HSP90AA4PQ58FG1 418 aa12.91□□□□□ -0.34
TP53-223ENST00000618944 METTL16Q86W50 562 aaKnown RBP12.91□□□□□ -0.34
TP53-223ENST00000618944 ZNF654Q8IZM8 581 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms