RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 PNOCQ13519 176 aa22.28■■□□□ 1.16
PCDHGB3-202ENST00000618934 GNL2Q13823 731 aaKnown RBP22.28■■□□□ 1.16
PCDHGB3-202ENST00000618934 CCDC82Q8N4S0 544 aa22.28■■□□□ 1.16
PCDHGB3-202ENST00000618934 ANKRD7Q92527 254 aa22.28■■□□□ 1.16
PCDHGB3-202ENST00000618934 COL4A1P02462 1669 aa22.28■■□□□ 1.16
PCDHGB3-202ENST00000618934 ARAP2Q8WZ64 1704 aa22.28■■□□□ 1.16
PCDHGB3-202ENST00000618934 DOCK2Q92608 1830 aa22.28■■□□□ 1.16
PCDHGB3-202ENST00000618934 SMTNL1A8MU46 457 aa22.28■■□□□ 1.16
PCDHGB3-202ENST00000618934 SMC2O95347 1197 aa22.28■■□□□ 1.16
PCDHGB3-202ENST00000618934 SPECC1Q5M775 1068 aa22.28■■□□□ 1.16
PCDHGB3-202ENST00000618934 AKNAD1Q5T1N1 836 aa22.28■■□□□ 1.16
PCDHGB3-202ENST00000618934 ACSBG1Q96GR2 724 aa22.28■■□□□ 1.16
PCDHGB3-202ENST00000618934 SLC12A7Q9Y666 1083 aa22.28■■□□□ 1.16
PCDHGB3-202ENST00000618934 ATP1A3P13637 1013 aa22.27■■□□□ 1.16
PCDHGB3-202ENST00000618934 LMOD1P29536 600 aaPredicted RBP22.27■■□□□ 1.16
PCDHGB3-202ENST00000618934 KCNJ14Q9UNX9 436 aa22.27■■□□□ 1.16
PCDHGB3-202ENST00000618934 NEMFO60524 1076 aa22.27■■□□□ 1.16
PCDHGB3-202ENST00000618934 LIFRP42702 1097 aa22.27■■□□□ 1.16
PCDHGB3-202ENST00000618934 NCBP1Q09161 790 aaKnown RBP22.27■■□□□ 1.16
PCDHGB3-202ENST00000618934 CEP135Q66GS9 1140 aa22.27■■□□□ 1.16
PCDHGB3-202ENST00000618934 ARMCX5Q6P1M9 558 aa22.27■■□□□ 1.16
PCDHGB3-202ENST00000618934 CPLX2Q6PUV4 134 aaKnown RBP22.27■■□□□ 1.16
PCDHGB3-202ENST00000618934 FOXP4Q8IVH2 680 aaPredicted RBP22.27■■□□□ 1.16
PCDHGB3-202ENST00000618934 BTBD18B2RXH4 712 aa22.26■■□□□ 1.15
PCDHGB3-202ENST00000618934 PPP6R2O75170 966 aa22.26■■□□□ 1.15
PCDHGB3-202ENST00000618934 CRKLP46109 303 aaKnown RBP22.26■■□□□ 1.15
PCDHGB3-202ENST00000618934 LONRF3Q496Y0 759 aa22.26■■□□□ 1.15
PCDHGB3-202ENST00000618934 PPP4R3BQ5MIZ7 849 aa22.26■■□□□ 1.15
PCDHGB3-202ENST00000618934 NYAP1Q6ZVC0 841 aa22.26■■□□□ 1.15
PCDHGB3-202ENST00000618934 TMC6Q7Z403 805 aa22.26■■□□□ 1.15
PCDHGB3-202ENST00000618934 OSBPL5Q9H0X9 879 aaPredicted RBP22.26■■□□□ 1.15
PCDHGB3-202ENST00000618934 TOMM22Q9NS69 142 aa22.26■■□□□ 1.15
PCDHGB3-202ENST00000618934 SLC4A4Q9Y6R1 1079 aa22.26■■□□□ 1.15
PCDHGB3-202ENST00000618934 SSRP1Q08945 709 aaKnown RBP22.26■■□□□ 1.15
PCDHGB3-202ENST00000618934 RESP18Q5W5W9 173 aa22.26■■□□□ 1.15
PCDHGB3-202ENST00000618934 ADGRA1Q86SQ6 560 aa22.26■■□□□ 1.15
PCDHGB3-202ENST00000618934 UTP14AQ9BVJ6 771 aaKnown RBP22.26■■□□□ 1.15
PCDHGB3-202ENST00000618934 FOXN1O15353 648 aa22.25■■□□□ 1.15
PCDHGB3-202ENST00000618934 TOB1P50616 345 aaPredicted RBP22.25■■□□□ 1.15
PCDHGB3-202ENST00000618934 GRIN1Q05586 938 aa22.25■■□□□ 1.15
PCDHGB3-202ENST00000618934 MFSD6Q6ZSS7 791 aa22.25■■□□□ 1.15
PCDHGB3-202ENST00000618934 TUBE1Q9UJT0 475 aa22.25■■□□□ 1.15
PCDHGB3-202ENST00000618934 CAMTA2O94983 1202 aa22.25■■□□□ 1.15
PCDHGB3-202ENST00000618934 FMNL1O95466 1100 aaPredicted RBP22.25■■□□□ 1.15
PCDHGB3-202ENST00000618934 METTL16Q86W50 562 aaKnown RBP22.25■■□□□ 1.15
PCDHGB3-202ENST00000618934 CCAR2Q8N163 923 aaKnown RBP22.25■■□□□ 1.15
PCDHGB3-202ENST00000618934 CCDC87Q9NVE4 849 aa22.25■■□□□ 1.15
PCDHGB3-202ENST00000618934 DOT1LQ8TEK3 1739 aa22.24■■□□□ 1.15
PCDHGB3-202ENST00000618934 TDO2P48775 406 aa22.24■■□□□ 1.15
PCDHGB3-202ENST00000618934 ITPK1Q13572 414 aa22.24■■□□□ 1.15
PCDHGB3-202ENST00000618934 PTPN21Q16825 1174 aa22.24■■□□□ 1.15
PCDHGB3-202ENST00000618934 DPF2Q92785 391 aa22.24■■□□□ 1.15
PCDHGB3-202ENST00000618934 TIGD1Q96MW7 591 aa22.24■■□□□ 1.15
PCDHGB3-202ENST00000618934 MYH14Q7Z406 1995 aaKnown RBP22.24■■□□□ 1.15
PCDHGB3-202ENST00000618934 ATP6V1AP38606 617 aa22.23■■□□□ 1.15
PCDHGB3-202ENST00000618934 TRIM29Q14134 588 aa22.23■■□□□ 1.15
PCDHGB3-202ENST00000618934 PDCL2Q8N4E4 241 aa22.23■■□□□ 1.15
PCDHGB3-202ENST00000618934 IFNAR1P17181 557 aa22.23■■□□□ 1.15
PCDHGB3-202ENST00000618934 RGS22Q8NE09 1264 aa22.23■■□□□ 1.15
PCDHGB3-202ENST00000618934 FAM237AA0A1B0GTK4 181 aa22.22■■□□□ 1.15
PCDHGB3-202ENST00000618934 FANCCQ00597 558 aa22.22■■□□□ 1.15
PCDHGB3-202ENST00000618934 CHRNDQ07001 517 aa22.22■■□□□ 1.15
PCDHGB3-202ENST00000618934 PTPN14Q15678 1187 aa22.22■■□□□ 1.15
PCDHGB3-202ENST00000618934 CCDC112Q8NEF3 446 aa22.22■■□□□ 1.15
PCDHGB3-202ENST00000618934 SDR42E1Q8WUS8 393 aa22.22■■□□□ 1.15
PCDHGB3-202ENST00000618934 STAG1Q8WVM7 1258 aa22.22■■□□□ 1.15
PCDHGB3-202ENST00000618934 AK7Q96M32 723 aa22.22■■□□□ 1.15
PCDHGB3-202ENST00000618934 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.22■■□□□ 1.15
PCDHGB3-202ENST00000618934 PAXBP1Q9Y5B6 917 aa22.22■■□□□ 1.15
PCDHGB3-202ENST00000618934 E4F1Q66K89 784 aaPredicted RBP22.22■■□□□ 1.15
PCDHGB3-202ENST00000618934 NIP7Q9Y221 180 aaKnown RBP eCLIP22.22■■□□□ 1.15
PCDHGB3-202ENST00000618934 NTSR2O95665 410 aa22.21■■□□□ 1.15
PCDHGB3-202ENST00000618934 BMP6P22004 513 aa22.21■■□□□ 1.15
PCDHGB3-202ENST00000618934 NR5A1Q13285 461 aa22.21■■□□□ 1.15
PCDHGB3-202ENST00000618934 NOSTRINQ8IVI9 506 aa22.21■■□□□ 1.15
PCDHGB3-202ENST00000618934 KRT23Q9C075 422 aa22.21■■□□□ 1.15
PCDHGB3-202ENST00000618934 LRP2BPQ9P2M1 347 aa22.21■■□□□ 1.15
PCDHGB3-202ENST00000618934 KCNH3Q9ULD8 1083 aa22.21■■□□□ 1.15
PCDHGB3-202ENST00000618934 BCORQ6W2J9 1755 aa22.21■■□□□ 1.15
PCDHGB3-202ENST00000618934 GSDMDP57764 484 aa22.21■■□□□ 1.15
PCDHGB3-202ENST00000618934 DIS3L2Q8IYB7 885 aaKnown RBP22.21■■□□□ 1.15
PCDHGB3-202ENST00000618934 JMYQ8N9B5 988 aa22.21■■□□□ 1.15
PCDHGB3-202ENST00000618934 CNNM2Q9H8M5 875 aa22.21■■□□□ 1.15
PCDHGB3-202ENST00000618934 IMPACTQ9P2X3 320 aa22.21■■□□□ 1.15
PCDHGB3-202ENST00000618934 COL14A1Q05707 1796 aaKnown RBP22.21■■□□□ 1.15
PCDHGB3-202ENST00000618934 TAF1P21675 1872 aa22.21■■□□□ 1.15
PCDHGB3-202ENST00000618934 STK36Q9NRP7 1315 aa22.21■■□□□ 1.15
PCDHGB3-202ENST00000618934 CUTAO60888 179 aa22.2■■□□□ 1.14
PCDHGB3-202ENST00000618934 MMP1P03956 469 aa22.2■■□□□ 1.14
PCDHGB3-202ENST00000618934 CBX1P83916 185 aa22.2■■□□□ 1.14
PCDHGB3-202ENST00000618934 PDE4BQ07343 736 aa22.2■■□□□ 1.14
PCDHGB3-202ENST00000618934 WTAPQ15007 396 aa22.2■■□□□ 1.14
PCDHGB3-202ENST00000618934 RTN1Q16799 776 aa22.2■■□□□ 1.14
PCDHGB3-202ENST00000618934 CCDC152Q4G0S7 254 aa22.2■■□□□ 1.14
PCDHGB3-202ENST00000618934 OXER1Q8TDS5 423 aa22.2■■□□□ 1.14
PCDHGB3-202ENST00000618934 SHISA4Q96DD7 197 aa22.2■■□□□ 1.14
PCDHGB3-202ENST00000618934 PRDM10Q9NQV6 1147 aa22.2■■□□□ 1.14
PCDHGB3-202ENST00000618934 PCDHA5Q9Y5H7 936 aa22.2■■□□□ 1.14
PCDHGB3-202ENST00000618934 TIAM2Q8IVF5 1701 aa22.2■■□□□ 1.14
PCDHGB3-202ENST00000618934 KRBA2Q6ZNG9 492 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms