RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 TSR2Q969E8 191 aaKnown RBP4.78□□□□□ -1.64
UBE2D3-233ENST00000618836 GJD4Q96KN9 370 aaPredicted RBP4.78□□□□□ -1.64
UBE2D3-233ENST00000618836 SPAG5Q96R06 1193 aa4.78□□□□□ -1.64
UBE2D3-233ENST00000618836 TRIM6Q9C030 488 aaPredicted RBP4.78□□□□□ -1.64
UBE2D3-233ENST00000618836 PCSK1NQ9UHG2 260 aa4.78□□□□□ -1.64
UBE2D3-233ENST00000618836 PRKAB1Q9Y478 270 aa4.78□□□□□ -1.64
UBE2D3-233ENST00000618836 EID1Q9Y6B2 187 aa4.78□□□□□ -1.64
UBE2D3-233ENST00000618836 SOS2Q07890 1332 aaPredicted RBP4.78□□□□□ -1.64
UBE2D3-233ENST00000618836 FSD2A1L4K1 749 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 IQCA1LA6NCM1 817 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 GABBR2O75899 941 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 ATP2B1P20020 1258 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 ALKBH2Q6NS38 261 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 SYNE3Q6ZMZ3 975 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 SYMPKQ92797 1274 aaKnown RBP4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 NELL2Q99435 816 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 PRRT4C9JH25 899 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 DIAPH1O60610 1272 aaKnown RBP4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 BPNT1O95861 308 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 HARSP12081 509 aaKnown RBP4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 ENOX2Q16206 610 aaKnown RBP4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 FAM133BQ5BKY9 247 aaKnown RBP4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 ABCG4Q9H172 646 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 CLIP2Q9UDT6 1046 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 KIF3AQ9Y496 699 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 SRCAPQ6ZRS2 3230 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 MBD5Q9P267 1494 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 RNF123Q5XPI4 1314 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 H0YHG0 523 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 SGTAO43765 313 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 KCNJ4P48050 445 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 TRAF1Q13077 416 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 MRPL58Q14197 206 aaKnown RBP4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 DAAM2Q86T65 1068 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 TEX9Q8N6V9 391 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 CCDC34Q96HJ3 373 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 DHRS1Q96LJ7 313 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 TIGD1Q96MW7 591 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 BACH2Q9BYV9 841 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 OSBPL2Q9H1P3 480 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 RIC8AQ9NPQ8 531 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 TPCN1Q9ULQ1 816 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 CHMP3Q9Y3E7 222 aa4.77□□□□□ -1.65
UBE2D3-233ENST00000618836 NHSQ6T4R5 1651 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 NPHP1O15259 732 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 MTRF1O75570 445 aaKnown RBP4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 RFX1P22670 979 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 GTF2F1P35269 517 aaKnown RBP eCLIP4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 BPIFB3P59826 476 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 ADCY2Q08462 1091 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 EIF4A2Q14240 407 aaKnown RBP4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 MEX3CQ5U5Q3 659 aaKnown RBP4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 CDCA2Q69YH5 1023 aaPredicted RBP4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 USP48Q86UV5 1035 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 TMC1Q8TDI8 760 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 TMEM98Q9Y2Y6 226 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 MRPS23Q9Y3D9 190 aaKnown RBP4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 ADAMTSL1Q8N6G6 1762 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 MYBL2P10244 700 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 SESN3P58005 492 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 UBXN2AP68543 259 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 CBLBQ13191 982 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 SLC5A9Q2M3M2 681 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 SPDYCQ5MJ68 293 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 TSHZ3Q63HK5 1081 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 PACS1Q6VY07 963 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 IFNL3Q8IZI9 196 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 PAF1Q8N7H5 531 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 PCDHGC3Q9UN70 934 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 CDC42BPGQ6DT37 1551 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 CCDC66A2RUB6 948 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 NOS2P35228 1153 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 TRIM29Q14134 588 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 MYBPC3Q14896 1274 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 KRT72Q14CN4 511 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 Q3C1V9 767 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 TBC1D25Q3MII6 688 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 HYIQ5T013 277 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 CPLX2Q6PUV4 134 aaKnown RBP4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 UROC1Q96N76 676 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 UCN2Q96RP3 112 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 RABGAP1Q9Y3P9 1069 aa4.76□□□□□ -1.65
UBE2D3-233ENST00000618836 SOWAHDA6NJG2 315 aa4.75□□□□□ -1.65
UBE2D3-233ENST00000618836 SCAMP3O14828 347 aaKnown RBP4.75□□□□□ -1.65
UBE2D3-233ENST00000618836 NCAM1P13591 858 aa4.75□□□□□ -1.65
UBE2D3-233ENST00000618836 ZNF24P17028 368 aa4.75□□□□□ -1.65
UBE2D3-233ENST00000618836 CLK2P49760 499 aaKnown RBP4.75□□□□□ -1.65
UBE2D3-233ENST00000618836 ARSIQ5FYB1 569 aa4.75□□□□□ -1.65
UBE2D3-233ENST00000618836 WDR45BQ5MNZ6 344 aa4.75□□□□□ -1.65
UBE2D3-233ENST00000618836 C10orf62Q5T681 223 aaPredicted RBP4.75□□□□□ -1.65
UBE2D3-233ENST00000618836 C9orf131Q5VYM1 1079 aa4.75□□□□□ -1.65
UBE2D3-233ENST00000618836 SLAIN1Q8ND83 568 aa4.75□□□□□ -1.65
UBE2D3-233ENST00000618836 ANKK1Q8NFD2 765 aa4.75□□□□□ -1.65
UBE2D3-233ENST00000618836 PGBD4Q96DM1 585 aa4.75□□□□□ -1.65
UBE2D3-233ENST00000618836 BAG1Q99933 345 aaPredicted RBP4.75□□□□□ -1.65
UBE2D3-233ENST00000618836 DEF6Q9H4E7 631 aa4.75□□□□□ -1.65
UBE2D3-233ENST00000618836 TBK1Q9UHD2 729 aa4.75□□□□□ -1.65
UBE2D3-233ENST00000618836 GTF3C4Q9UKN8 822 aa4.75□□□□□ -1.65
UBE2D3-233ENST00000618836 HDAC9Q9UKV0 1011 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms