RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 FANCCQ00597 558 aa16.13■□□□□ 0.17
PTPN9-206ENST00000618819 ZNF174Q15697 407 aa16.13■□□□□ 0.17
PTPN9-206ENST00000618819 TAF12Q16514 161 aa16.13■□□□□ 0.17
PTPN9-206ENST00000618819 BSPRYQ5W0U4 402 aa16.13■□□□□ 0.17
PTPN9-206ENST00000618819 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.13■□□□□ 0.17
PTPN9-206ENST00000618819 STX10O60499 249 aa16.12■□□□□ 0.17
PTPN9-206ENST00000618819 ELP1O95163 1332 aa16.12■□□□□ 0.17
PTPN9-206ENST00000618819 RAD51AP2Q09MP3 1159 aa16.12■□□□□ 0.17
PTPN9-206ENST00000618819 MAP3K21Q5TCX8 1036 aa16.12■□□□□ 0.17
PTPN9-206ENST00000618819 LRRC23Q53EV4 343 aaPredicted RBP16.12■□□□□ 0.17
PTPN9-206ENST00000618819 ZKSCAN3Q9BRR0 538 aa16.12■□□□□ 0.17
PTPN9-206ENST00000618819 MTMR3Q13615 1198 aa16.12■□□□□ 0.17
PTPN9-206ENST00000618819 TUBB2AQ13885 445 aa16.12■□□□□ 0.17
PTPN9-206ENST00000618819 CCDC13Q8IYE1 715 aa16.12■□□□□ 0.17
PTPN9-206ENST00000618819 TUBB2BQ9BVA1 445 aa16.12■□□□□ 0.17
PTPN9-206ENST00000618819 CAPS2Q9BXY5 557 aa16.12■□□□□ 0.17
PTPN9-206ENST00000618819 ZNF75DP51815 510 aa16.12■□□□□ 0.17
PTPN9-206ENST00000618819 NMIQ13287 307 aaPredicted RBP16.12■□□□□ 0.17
PTPN9-206ENST00000618819 BCAS4Q8TDM0 211 aa16.12■□□□□ 0.17
PTPN9-206ENST00000618819 VEZTQ9HBM0 779 aa16.12■□□□□ 0.17
PTPN9-206ENST00000618819 PKD2L1Q9P0L9 805 aa16.12■□□□□ 0.17
PTPN9-206ENST00000618819 F8W031 263 aaPredicted RBP16.12■□□□□ 0.17
PTPN9-206ENST00000618819 MCMDC2Q4G0Z9 681 aa16.12■□□□□ 0.17
PTPN9-206ENST00000618819 WDR44Q5JSH3 913 aa16.12■□□□□ 0.17
PTPN9-206ENST00000618819 CAPN12Q6ZSI9 719 aa16.12■□□□□ 0.17
PTPN9-206ENST00000618819 HDAC9Q9UKV0 1011 aa16.12■□□□□ 0.17
PTPN9-206ENST00000618819 CCDC89Q8N998 374 aa16.11■□□□□ 0.17
PTPN9-206ENST00000618819 RHPN1Q8TCX5 695 aa16.11■□□□□ 0.17
PTPN9-206ENST00000618819 SNX21Q969T3 373 aa16.11■□□□□ 0.17
PTPN9-206ENST00000618819 MPHOSPH6Q99547 160 aaKnown RBP16.11■□□□□ 0.17
PTPN9-206ENST00000618819 SLF1Q9BQI6 1058 aa16.11■□□□□ 0.17
PTPN9-206ENST00000618819 CTTNBP2NLQ9P2B4 639 aa16.11■□□□□ 0.17
PTPN9-206ENST00000618819 HINFPQ9BQA5 517 aa16.11■□□□□ 0.17
PTPN9-206ENST00000618819 CNNM2Q9H8M5 875 aa16.11■□□□□ 0.17
PTPN9-206ENST00000618819 SPDYE3A6NKU9 549 aa16.11■□□□□ 0.17
PTPN9-206ENST00000618819 PDCD2Q16342 344 aaPredicted RBP16.11■□□□□ 0.17
PTPN9-206ENST00000618819 AMOTQ4VCS5 1084 aa16.11■□□□□ 0.17
PTPN9-206ENST00000618819 CACYBPQ9HB71 228 aaKnown RBP16.11■□□□□ 0.17
PTPN9-206ENST00000618819 TRIM35Q9UPQ4 493 aa16.11■□□□□ 0.17
PTPN9-206ENST00000618819 SYNRGQ9UMZ2 1314 aa16.11■□□□□ 0.17
PTPN9-206ENST00000618819 ZBBXA8MT70 800 aa16.11■□□□□ 0.17
PTPN9-206ENST00000618819 STK10O94804 968 aaKnown RBP16.1■□□□□ 0.17
PTPN9-206ENST00000618819 PDE4DQ08499 809 aa16.1■□□□□ 0.17
PTPN9-206ENST00000618819 TMTC2Q8N394 836 aa16.1■□□□□ 0.17
PTPN9-206ENST00000618819 RUSC2Q8N2Y8 1516 aa16.1■□□□□ 0.17
PTPN9-206ENST00000618819 LDHCP07864 332 aa16.1■□□□□ 0.17
PTPN9-206ENST00000618819 CCT5P48643 541 aa16.1■□□□□ 0.17
PTPN9-206ENST00000618819 MTX1Q13505 466 aa16.1■□□□□ 0.17
PTPN9-206ENST00000618819 IQUBQ8NA54 791 aa16.1■□□□□ 0.17
PTPN9-206ENST00000618819 CTAGE3PQ8IX95 158 aa16.1■□□□□ 0.17
PTPN9-206ENST00000618819 LGSNQ5TDP6 509 aa16.1■□□□□ 0.17
PTPN9-206ENST00000618819 UHMK1Q8TAS1 419 aaKnown RBP16.1■□□□□ 0.17
PTPN9-206ENST00000618819 PPP4R1Q8TF05 950 aa16.1■□□□□ 0.17
PTPN9-206ENST00000618819 CBX8Q9HC52 389 aa16.1■□□□□ 0.17
PTPN9-206ENST00000618819 MYO1AQ9UBC5 1043 aa16.1■□□□□ 0.17
PTPN9-206ENST00000618819 CFAP221Q4G0U5 840 aa16.1■□□□□ 0.17
PTPN9-206ENST00000618819 TRIM14Q14142 442 aa16.1■□□□□ 0.17
PTPN9-206ENST00000618819 KIF22Q14807 665 aa16.1■□□□□ 0.17
PTPN9-206ENST00000618819 PTPROQ16827 1216 aa16.1■□□□□ 0.17
PTPN9-206ENST00000618819 PTPRGP23470 1445 aa16.1■□□□□ 0.17
PTPN9-206ENST00000618819 CUX1P39880 1505 aa16.1■□□□□ 0.17
PTPN9-206ENST00000618819 TRPA1O75762 1119 aa16.1■□□□□ 0.17
PTPN9-206ENST00000618819 KRT3P12035 628 aa16.1■□□□□ 0.17
PTPN9-206ENST00000618819 NCAPGQ9BPX3 1015 aa16.1■□□□□ 0.17
PTPN9-206ENST00000618819 DNAJC8O75937 253 aaPredicted RBP16.09■□□□□ 0.17
PTPN9-206ENST00000618819 PDE1AP54750 535 aa16.09■□□□□ 0.17
PTPN9-206ENST00000618819 SLC9C1Q4G0N8 1177 aa16.09■□□□□ 0.17
PTPN9-206ENST00000618819 LIN9Q5TKA1 542 aa16.09■□□□□ 0.17
PTPN9-206ENST00000618819 JADE1Q6IE81 842 aa16.09■□□□□ 0.17
PTPN9-206ENST00000618819 SV2BQ7L1I2 683 aa16.09■□□□□ 0.17
PTPN9-206ENST00000618819 SRGAP1Q7Z6B7 1085 aa16.09■□□□□ 0.17
PTPN9-206ENST00000618819 TEX11Q8IYF3 940 aa16.09■□□□□ 0.17
PTPN9-206ENST00000618819 RRP36Q96EU6 259 aaKnown RBP16.09■□□□□ 0.17
PTPN9-206ENST00000618819 FNBP1Q96RU3 617 aa16.09■□□□□ 0.17
PTPN9-206ENST00000618819 DBF4Q9UBU7 674 aaPredicted RBP16.09■□□□□ 0.17
PTPN9-206ENST00000618819 VWA3BQ502W6 1294 aa16.09■□□□□ 0.17
PTPN9-206ENST00000618819 RPL13P26373 211 aaKnown RBP16.09■□□□□ 0.17
PTPN9-206ENST00000618819 WDR97A6NE52 1622 aa16.09■□□□□ 0.17
PTPN9-206ENST00000618819 C8orf34Q49A92 452 aa16.09■□□□□ 0.17
PTPN9-206ENST00000618819 NCBP1Q09161 790 aaKnown RBP16.09■□□□□ 0.17
PTPN9-206ENST00000618819 CROCCP2Q86T23 111 aa16.09■□□□□ 0.17
PTPN9-206ENST00000618819 NPHP3Q7Z494 1330 aa16.09■□□□□ 0.17
PTPN9-206ENST00000618819 TAB2Q9NYJ8 693 aa16.08■□□□□ 0.17
PTPN9-206ENST00000618819 CASP2P42575 452 aa16.08■□□□□ 0.17
PTPN9-206ENST00000618819 CCDC117Q8IWD4 279 aaPredicted RBP16.08■□□□□ 0.17
PTPN9-206ENST00000618819 LARSQ9P2J5 1176 aaKnown RBP16.08■□□□□ 0.17
PTPN9-206ENST00000618819 RNF8O76064 485 aa16.08■□□□□ 0.16
PTPN9-206ENST00000618819 E2F4Q16254 413 aa16.08■□□□□ 0.16
PTPN9-206ENST00000618819 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.08■□□□□ 0.16
PTPN9-206ENST00000618819 PI4KAP2A4QPH2 592 aa16.08■□□□□ 0.16
PTPN9-206ENST00000618819 ANXA1P04083 346 aa16.08■□□□□ 0.16
PTPN9-206ENST00000618819 LONRF2Q1L5Z9 754 aa16.08■□□□□ 0.16
PTPN9-206ENST00000618819 PI4KAP1Q8N8J0 262 aa16.08■□□□□ 0.16
PTPN9-206ENST00000618819 HELLSQ9NRZ9 838 aa16.08■□□□□ 0.16
PTPN9-206ENST00000618819 PLEKHH2Q8IVE3 1493 aa16.08■□□□□ 0.16
PTPN9-206ENST00000618819 NBPF6Q5VWK0 638 aa16.08■□□□□ 0.16
PTPN9-206ENST00000618819 NUDCD3Q8IVD9 361 aa16.08■□□□□ 0.16
PTPN9-206ENST00000618819 NBPF4Q96M43 638 aa16.08■□□□□ 0.16
PTPN9-206ENST00000618819 CADPSQ9ULU8 1353 aa16.08■□□□□ 0.16
PTPN9-206ENST00000618819 GOLGA8KD6RF30 607 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms