RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 MS4A4AQ96JQ5 239 aa26.81■■□□□ 1.88
TRAF4-217ENST00000618771 ZNF512BQ96KM6 892 aaPredicted RBP26.81■■□□□ 1.88
TRAF4-217ENST00000618771 CCDC8Q9H0W5 538 aaPredicted RBP26.81■■□□□ 1.88
TRAF4-217ENST00000618771 CHMP4BQ9H444 224 aaKnown RBP26.81■■□□□ 1.88
TRAF4-217ENST00000618771 TLR7Q9NYK1 1049 aaKnown RBP26.81■■□□□ 1.88
TRAF4-217ENST00000618771 TESPA1A2RU30 521 aaPredicted RBP26.8■■□□□ 1.88
TRAF4-217ENST00000618771 WDHD1O75717 1129 aaPredicted RBP26.8■■□□□ 1.88
TRAF4-217ENST00000618771 HSP90AB4PQ58FF6 505 aa26.8■■□□□ 1.88
TRAF4-217ENST00000618771 ERO1BQ86YB8 467 aa26.8■■□□□ 1.88
TRAF4-217ENST00000618771 RPAP2Q8IXW5 612 aaPredicted RBP26.8■■□□□ 1.88
TRAF4-217ENST00000618771 HTTP42858 3142 aa26.8■■□□□ 1.88
TRAF4-217ENST00000618771 CDK5RAP2Q96SN8 1893 aa26.79■■□□□ 1.88
TRAF4-217ENST00000618771 HMMRO75330 724 aa26.79■■□□□ 1.88
TRAF4-217ENST00000618771 INPP5BP32019 993 aa26.79■■□□□ 1.88
TRAF4-217ENST00000618771 GTF2A2P52657 109 aa26.79■■□□□ 1.88
TRAF4-217ENST00000618771 RHBDL3P58872 404 aa26.79■■□□□ 1.88
TRAF4-217ENST00000618771 OTOP1Q7RTM1 612 aa26.79■■□□□ 1.88
TRAF4-217ENST00000618771 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.79■■□□□ 1.88
TRAF4-217ENST00000618771 PDE3AQ14432 1141 aa26.78■■□□□ 1.88
TRAF4-217ENST00000618771 ZSCAN29Q8IWY8 852 aaPredicted RBP26.78■■□□□ 1.88
TRAF4-217ENST00000618771 PTPN18Q99952 460 aa26.78■■□□□ 1.88
TRAF4-217ENST00000618771 DDX4Q9NQI0 724 aaKnown RBP26.78■■□□□ 1.88
TRAF4-217ENST00000618771 ATRNL1Q5VV63 1379 aa26.77■■□□□ 1.88
TRAF4-217ENST00000618771 CCL15-CCL14A0A0B4J2E2 113 aa26.77■■□□□ 1.88
TRAF4-217ENST00000618771 PICALMQ13492 652 aa26.77■■□□□ 1.88
TRAF4-217ENST00000618771 CCL15Q16663 113 aa26.77■■□□□ 1.88
TRAF4-217ENST00000618771 C20orf194Q5TEA3 1177 aa26.77■■□□□ 1.88
TRAF4-217ENST00000618771 AACSQ86V21 672 aa26.77■■□□□ 1.88
TRAF4-217ENST00000618771 BRI3BPQ8WY22 251 aa26.77■■□□□ 1.88
TRAF4-217ENST00000618771 ZNF112Q9UJU3 913 aa26.77■■□□□ 1.88
TRAF4-217ENST00000618771 MAP4K4O95819 1239 aaPredicted RBP26.76■■□□□ 1.87
TRAF4-217ENST00000618771 CYP2E1P05181 493 aaPredicted RBP26.76■■□□□ 1.87
TRAF4-217ENST00000618771 NAA16Q6N069 864 aaPredicted RBP26.76■■□□□ 1.87
TRAF4-217ENST00000618771 SIRT2Q8IXJ6 389 aa26.76■■□□□ 1.87
TRAF4-217ENST00000618771 FOCADQ5VW36 1801 aa26.76■■□□□ 1.87
TRAF4-217ENST00000618771 DOCK1Q14185 1865 aa26.75■■□□□ 1.87
TRAF4-217ENST00000618771 ZAP70P43403 619 aa26.75■■□□□ 1.87
TRAF4-217ENST00000618771 CRHR2Q13324 411 aa26.75■■□□□ 1.87
TRAF4-217ENST00000618771 PPIL2Q13356 520 aa26.75■■□□□ 1.87
TRAF4-217ENST00000618771 SH3BP5LQ7L8J4 393 aa26.75■■□□□ 1.87
TRAF4-217ENST00000618771 RHPN1Q8TCX5 695 aa26.75■■□□□ 1.87
TRAF4-217ENST00000618771 CD99L2Q8TCZ2 262 aa26.75■■□□□ 1.87
TRAF4-217ENST00000618771 ERO1AQ96HE7 468 aa26.75■■□□□ 1.87
TRAF4-217ENST00000618771 NOL10Q9BSC4 688 aaKnown RBP26.75■■□□□ 1.87
TRAF4-217ENST00000618771 IL1RAPL2Q9NP60 686 aa26.75■■□□□ 1.87
TRAF4-217ENST00000618771 DDTLA6NHG4 134 aaPredicted RBP26.74■■□□□ 1.87
TRAF4-217ENST00000618771 IRF6O14896 467 aa26.74■■□□□ 1.87
TRAF4-217ENST00000618771 NPM3O75607 178 aaKnown RBP26.74■■□□□ 1.87
TRAF4-217ENST00000618771 CENPFP49454 3210 aa26.74■■□□□ 1.87
TRAF4-217ENST00000618771 CETPP11597 493 aa26.73■■□□□ 1.87
TRAF4-217ENST00000618771 PPATQ06203 517 aa26.73■■□□□ 1.87
TRAF4-217ENST00000618771 NOL9Q5SY16 702 aaKnown RBP26.73■■□□□ 1.87
TRAF4-217ENST00000618771 PIH1D3Q9NQM4 214 aaKnown RBP26.73■■□□□ 1.87
TRAF4-217ENST00000618771 APBB1O00213 710 aa26.72■■□□□ 1.87
TRAF4-217ENST00000618771 IGSF3O75054 1194 aa26.72■■□□□ 1.87
TRAF4-217ENST00000618771 SNAPC2Q13487 334 aa26.72■■□□□ 1.87
TRAF4-217ENST00000618771 KIF1BPQ96EK5 621 aa26.72■■□□□ 1.87
TRAF4-217ENST00000618771 PTPN22Q9Y2R2 807 aa26.72■■□□□ 1.87
TRAF4-217ENST00000618771 COL2A1P02458 1487 aaPredicted RBP26.72■■□□□ 1.87
TRAF4-217ENST00000618771 KIAA0100Q14667 2235 aaKnown RBP26.71■■□□□ 1.87
TRAF4-217ENST00000618771 MKI67P46013 3256 aaKnown RBP26.71■■□□□ 1.87
TRAF4-217ENST00000618771 POTEFA5A3E0 1075 aa26.71■■□□□ 1.87
TRAF4-217ENST00000618771 TEX11Q8IYF3 940 aa26.71■■□□□ 1.87
TRAF4-217ENST00000618771 AATFQ9NY61 560 aaKnown RBP eCLIP26.71■■□□□ 1.87
TRAF4-217ENST00000618771 PHF20L1A8MW92 1017 aa26.7■■□□□ 1.86
TRAF4-217ENST00000618771 BAG3O95817 575 aa26.7■■□□□ 1.86
TRAF4-217ENST00000618771 MAP3K10Q02779 954 aa26.7■■□□□ 1.86
TRAF4-217ENST00000618771 TAF1CQ15572 869 aaPredicted RBP26.7■■□□□ 1.86
TRAF4-217ENST00000618771 CLASRPQ8N2M8 674 aaKnown RBP26.7■■□□□ 1.86
TRAF4-217ENST00000618771 FAM43AQ8N2R8 423 aa26.7■■□□□ 1.86
TRAF4-217ENST00000618771 EFCC1Q9HA90 598 aa26.7■■□□□ 1.86
TRAF4-217ENST00000618771 ATAD5Q96QE3 1844 aa26.69■■□□□ 1.86
TRAF4-217ENST00000618771 PTPRFP10586 1907 aa26.69■■□□□ 1.86
TRAF4-217ENST00000618771 PLCG2P16885 1265 aa26.69■■□□□ 1.86
TRAF4-217ENST00000618771 SP3Q02447 781 aa26.69■■□□□ 1.86
TRAF4-217ENST00000618771 ADGRA1Q86SQ6 560 aa26.69■■□□□ 1.86
TRAF4-217ENST00000618771 SH3RF3Q8TEJ3 882 aaPredicted RBP26.69■■□□□ 1.86
TRAF4-217ENST00000618771 OSBPL5Q9H0X9 879 aaPredicted RBP26.69■■□□□ 1.86
TRAF4-217ENST00000618771 PHIPQ8WWQ0 1821 aa26.69■■□□□ 1.86
TRAF4-217ENST00000618771 RAB11FIP3O75154 756 aa26.68■■□□□ 1.86
TRAF4-217ENST00000618771 IDH1O75874 414 aaKnown RBP26.68■■□□□ 1.86
TRAF4-217ENST00000618771 SCYL3Q8IZE3 742 aa26.68■■□□□ 1.86
TRAF4-217ENST00000618771 NDUFB9Q9Y6M9 179 aa26.68■■□□□ 1.86
TRAF4-217ENST00000618771 SIPA1L1O43166 1804 aa26.67■■□□□ 1.86
TRAF4-217ENST00000618771 BTBD19C9JJ37 291 aa26.67■■□□□ 1.86
TRAF4-217ENST00000618771 SLURP2P0DP57 97 aa26.67■■□□□ 1.86
TRAF4-217ENST00000618771 PPP4CP60510 307 aa26.67■■□□□ 1.86
TRAF4-217ENST00000618771 ZFYVE28Q9HCC9 887 aa26.67■■□□□ 1.86
TRAF4-217ENST00000618771 ZCCHC17Q9NP64 241 aaKnown RBP26.67■■□□□ 1.86
TRAF4-217ENST00000618771 KCNH4Q9UQ05 1017 aa26.67■■□□□ 1.86
TRAF4-217ENST00000618771 CAP1Q01518 475 aa26.66■■□□□ 1.86
TRAF4-217ENST00000618771 PICK1Q9NRD5 415 aa26.66■■□□□ 1.86
TRAF4-217ENST00000618771 MYH1P12882 1939 aa26.66■■□□□ 1.86
TRAF4-217ENST00000618771 TBC1D12O60347 775 aa26.65■■□□□ 1.86
TRAF4-217ENST00000618771 IFIT2P09913 472 aaKnown RBP26.65■■□□□ 1.86
TRAF4-217ENST00000618771 CYP7A1P22680 504 aa26.65■■□□□ 1.86
TRAF4-217ENST00000618771 BCL11AQ9H165 835 aa26.65■■□□□ 1.86
TRAF4-217ENST00000618771 ANTXR1Q9H6X2 564 aa26.65■■□□□ 1.86
TRAF4-217ENST00000618771 CTNND1O60716 968 aaKnown RBP26.64■■□□□ 1.86
TRAF4-217ENST00000618771 ARMC5Q96C12 935 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms