RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 UVSSAQ2YD98 709 aa15.86■□□□□ 0.13
CIITA-213ENST00000618327 M0R2C6 588 aa15.86■□□□□ 0.13
CIITA-213ENST00000618327 FOXO4P98177 505 aa15.86■□□□□ 0.13
CIITA-213ENST00000618327 FAM47AQ5JRC9 791 aa15.86■□□□□ 0.13
CIITA-213ENST00000618327 USP40Q9NVE5 1235 aa15.86■□□□□ 0.13
CIITA-213ENST00000618327 ADRA2BP18089 450 aa15.86■□□□□ 0.13
CIITA-213ENST00000618327 RDXP35241 583 aaKnown RBP15.86■□□□□ 0.13
CIITA-213ENST00000618327 TCP10Q12799 353 aa15.86■□□□□ 0.13
CIITA-213ENST00000618327 GRAPQ13588 217 aa15.86■□□□□ 0.13
CIITA-213ENST00000618327 NIM1KQ8IY84 436 aa15.86■□□□□ 0.13
CIITA-213ENST00000618327 GRAPLQ8TC17 118 aaPredicted RBP15.86■□□□□ 0.13
CIITA-213ENST00000618327 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.86■□□□□ 0.13
CIITA-213ENST00000618327 ARHGEF1Q92888 912 aaKnown RBP15.86■□□□□ 0.13
CIITA-213ENST00000618327 OSBP2Q969R2 916 aa15.86■□□□□ 0.13
CIITA-213ENST00000618327 MYOM1P52179 1685 aa15.86■□□□□ 0.13
CIITA-213ENST00000618327 RGS12O14924 1447 aa15.86■□□□□ 0.13
CIITA-213ENST00000618327 SMARCC2Q8TAQ2 1214 aa15.86■□□□□ 0.13
CIITA-213ENST00000618327 TSG101Q99816 390 aa15.86■□□□□ 0.13
CIITA-213ENST00000618327 SFPQP23246 707 aaKnown RBP eCLIP15.85■□□□□ 0.13
CIITA-213ENST00000618327 RABL6Q3YEC7 729 aaPredicted RBP15.85■□□□□ 0.13
CIITA-213ENST00000618327 RILPL1Q5EBL4 403 aa15.85■□□□□ 0.13
CIITA-213ENST00000618327 CT47A1Q5JQC4 288 aaPredicted RBP15.85■□□□□ 0.13
CIITA-213ENST00000618327 TBC1D9BQ66K14 1250 aa15.85■□□□□ 0.13
CIITA-213ENST00000618327 DEF6Q9H4E7 631 aa15.85■□□□□ 0.13
CIITA-213ENST00000618327 BRD1O95696 1058 aa15.85■□□□□ 0.13
CIITA-213ENST00000618327 AFMP43652 599 aa15.85■□□□□ 0.13
CIITA-213ENST00000618327 RASGRF1Q13972 1273 aa15.85■□□□□ 0.13
CIITA-213ENST00000618327 PDIA6Q15084 440 aa15.85■□□□□ 0.13
CIITA-213ENST00000618327 LEKR1Q6ZMV7 388 aa15.85■□□□□ 0.13
CIITA-213ENST00000618327 ZSCAN30Q86W11 494 aa15.85■□□□□ 0.13
CIITA-213ENST00000618327 CLIP2Q9UDT6 1046 aa15.85■□□□□ 0.13
CIITA-213ENST00000618327 KIF20AO95235 890 aa15.85■□□□□ 0.13
CIITA-213ENST00000618327 CDC37L1Q7L3B6 337 aa15.85■□□□□ 0.13
CIITA-213ENST00000618327 GPCPD1Q9NPB8 672 aa15.85■□□□□ 0.13
CIITA-213ENST00000618327 STAT6P42226 847 aa15.85■□□□□ 0.13
CIITA-213ENST00000618327 DIS3L2Q8IYB7 885 aaKnown RBP15.85■□□□□ 0.13
CIITA-213ENST00000618327 PUS7LQ9H0K6 701 aaKnown RBP15.85■□□□□ 0.13
CIITA-213ENST00000618327 MEGF6O75095 1541 aa15.85■□□□□ 0.13
CIITA-213ENST00000618327 MCM7P33993 719 aa15.84■□□□□ 0.13
CIITA-213ENST00000618327 ZNF654Q8IZM8 581 aa15.84■□□□□ 0.13
CIITA-213ENST00000618327 CCDC112Q8NEF3 446 aa15.84■□□□□ 0.13
CIITA-213ENST00000618327 PFKFB2O60825 505 aa15.84■□□□□ 0.13
CIITA-213ENST00000618327 ADCY5O95622 1261 aa15.84■□□□□ 0.13
CIITA-213ENST00000618327 ANO6Q4KMQ2 910 aa15.84■□□□□ 0.13
CIITA-213ENST00000618327 UBA5Q9GZZ9 404 aa15.84■□□□□ 0.13
CIITA-213ENST00000618327 BTDP43251 543 aa15.84■□□□□ 0.13
CIITA-213ENST00000618327 FAM200AQ8TCP9 573 aa15.84■□□□□ 0.13
CIITA-213ENST00000618327 PXDNLA1KZ92 1463 aa15.84■□□□□ 0.13
CIITA-213ENST00000618327 SPDYE3A6NKU9 549 aa15.83■□□□□ 0.13
CIITA-213ENST00000618327 MCAMP43121 646 aa15.83■□□□□ 0.13
CIITA-213ENST00000618327 DLGAP5Q15398 846 aa15.83■□□□□ 0.13
CIITA-213ENST00000618327 SLC27A3Q5K4L6 730 aa15.83■□□□□ 0.13
CIITA-213ENST00000618327 KIAA0825Q8IV33 1275 aa15.83■□□□□ 0.13
CIITA-213ENST00000618327 PPP1R12BO60237 982 aaPredicted RBP15.83■□□□□ 0.12
CIITA-213ENST00000618327 WDHD1O75717 1129 aaPredicted RBP15.83■□□□□ 0.12
CIITA-213ENST00000618327 TOP1P11387 765 aaKnown RBP15.83■□□□□ 0.12
CIITA-213ENST00000618327 SYCP1Q15431 976 aa15.83■□□□□ 0.12
CIITA-213ENST00000618327 KRT40Q6A162 431 aa15.83■□□□□ 0.12
CIITA-213ENST00000618327 KRI1Q8N9T8 703 aaKnown RBP15.83■□□□□ 0.12
CIITA-213ENST00000618327 LRRC27Q9C0I9 530 aa15.83■□□□□ 0.12
CIITA-213ENST00000618327 ATP8A2Q9NTI2 1148 aa15.83■□□□□ 0.12
CIITA-213ENST00000618327 CAGE1Q8TC20 777 aa15.83■□□□□ 0.12
CIITA-213ENST00000618327 TSPYL1Q9H0U9 437 aa15.83■□□□□ 0.12
CIITA-213ENST00000618327 SH2D4AQ9H788 454 aa15.83■□□□□ 0.12
CIITA-213ENST00000618327 LUC7LQ9NQ29 371 aaKnown RBP15.83■□□□□ 0.12
CIITA-213ENST00000618327 PIH1D3Q9NQM4 214 aaKnown RBP15.83■□□□□ 0.12
CIITA-213ENST00000618327 UQCRHLA0A096LP55 91 aa15.83■□□□□ 0.12
CIITA-213ENST00000618327 CD2BP2O95400 341 aaKnown RBP15.83■□□□□ 0.12
CIITA-213ENST00000618327 FGFR1OPO95684 399 aaKnown RBP15.83■□□□□ 0.12
CIITA-213ENST00000618327 UQCRHP07919 91 aa15.83■□□□□ 0.12
CIITA-213ENST00000618327 MMP10P09238 476 aa15.83■□□□□ 0.12
CIITA-213ENST00000618327 SCNN1DP51172 638 aa15.83■□□□□ 0.12
CIITA-213ENST00000618327 ANO1Q5XXA6 986 aa15.83■□□□□ 0.12
CIITA-213ENST00000618327 ERMNQ8TAM6 284 aa15.83■□□□□ 0.12
CIITA-213ENST00000618327 DHX58Q96C10 678 aa15.83■□□□□ 0.12
CIITA-213ENST00000618327 ZSCAN10Q96SZ4 725 aaPredicted RBP15.83■□□□□ 0.12
CIITA-213ENST00000618327 MED23Q9ULK4 1368 aa15.82■□□□□ 0.12
CIITA-213ENST00000618327 SNAP23O00161 211 aa15.82■□□□□ 0.12
CIITA-213ENST00000618327 RMND1Q9NWS8 449 aa15.82■□□□□ 0.12
CIITA-213ENST00000618327 SAMM50Q9Y512 469 aa15.82■□□□□ 0.12
CIITA-213ENST00000618327 TNKSO95271 1327 aa15.82■□□□□ 0.12
CIITA-213ENST00000618327 LMOD1P29536 600 aaPredicted RBP15.82■□□□□ 0.12
CIITA-213ENST00000618327 FKBP15Q5T1M5 1219 aa15.82■□□□□ 0.12
CIITA-213ENST00000618327 TICAM2Q86XR7 235 aa15.82■□□□□ 0.12
CIITA-213ENST00000618327 IFT172Q9UG01 1749 aa15.81■□□□□ 0.12
CIITA-213ENST00000618327 AXDND1Q5T1B0 1012 aaPredicted RBP15.81■□□□□ 0.12
CIITA-213ENST00000618327 WWC2Q6AWC2 1192 aa15.81■□□□□ 0.12
CIITA-213ENST00000618327 NF2P35240 595 aa15.81■□□□□ 0.12
CIITA-213ENST00000618327 DNAJC25Q9H1X3 360 aa15.81■□□□□ 0.12
CIITA-213ENST00000618327 ARHGEF10LQ9HCE6 1279 aa15.81■□□□□ 0.12
CIITA-213ENST00000618327 PODXL2Q9NZ53 605 aa15.81■□□□□ 0.12
CIITA-213ENST00000618327 MINPP1Q9UNW1 487 aa15.81■□□□□ 0.12
CIITA-213ENST00000618327 A0A1B0GVL5 298 aa15.81■□□□□ 0.12
CIITA-213ENST00000618327 MRPL12P52815 198 aaKnown RBP15.81■□□□□ 0.12
CIITA-213ENST00000618327 TYRO3Q06418 890 aa15.81■□□□□ 0.12
CIITA-213ENST00000618327 NECTIN1Q15223 517 aa15.81■□□□□ 0.12
CIITA-213ENST00000618327 ZNF174Q15697 407 aa15.81■□□□□ 0.12
CIITA-213ENST00000618327 DTHD1Q6ZMT9 781 aa15.81■□□□□ 0.12
CIITA-213ENST00000618327 PLA2G12BQ9BX93 195 aa15.81■□□□□ 0.12
CIITA-213ENST00000618327 BCS1LQ9Y276 419 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms