RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 MYH1P12882 1939 aa27.2■■□□□ 1.94
CBWD3-213ENST00000618217 BAZ2AQ9UIF9 1905 aaKnown RBP27.2■■□□□ 1.94
CBWD3-213ENST00000618217 DDX60LQ5H9U9 1706 aaKnown RBP27.2■■□□□ 1.94
CBWD3-213ENST00000618217 PICALMQ13492 652 aa27.19■■□□□ 1.94
CBWD3-213ENST00000618217 VPS53Q5VIR6 699 aa27.19■■□□□ 1.94
CBWD3-213ENST00000618217 CDC37L1Q7L3B6 337 aa27.19■■□□□ 1.94
CBWD3-213ENST00000618217 MAPKAPK5Q8IW41 473 aa27.19■■□□□ 1.94
CBWD3-213ENST00000618217 SULF1Q8IWU6 871 aa27.19■■□□□ 1.94
CBWD3-213ENST00000618217 FAM151AQ8WW52 585 aa27.19■■□□□ 1.94
CBWD3-213ENST00000618217 TEPSINQ96N21 525 aa27.19■■□□□ 1.94
CBWD3-213ENST00000618217 ESYT1Q9BSJ8 1104 aa27.19■■□□□ 1.94
CBWD3-213ENST00000618217 GLIS2Q9BZE0 524 aaPredicted RBP27.19■■□□□ 1.94
CBWD3-213ENST00000618217 DCP1AQ9NPI6 582 aaPredicted RBP27.19■■□□□ 1.94
CBWD3-213ENST00000618217 ADM5C9JUS6 153 aa27.19■■□□□ 1.94
CBWD3-213ENST00000618217 USP5P45974 858 aa27.19■■□□□ 1.94
CBWD3-213ENST00000618217 DLK2Q6UY11 383 aa27.19■■□□□ 1.94
CBWD3-213ENST00000618217 USP48Q86UV5 1035 aa27.19■■□□□ 1.94
CBWD3-213ENST00000618217 ATP8A2Q9NTI2 1148 aa27.19■■□□□ 1.94
CBWD3-213ENST00000618217 NAV1Q8NEY1 1877 aa27.18■■□□□ 1.94
CBWD3-213ENST00000618217 PATL2C9JE40 543 aaKnown RBP27.18■■□□□ 1.94
CBWD3-213ENST00000618217 TOMM70O94826 608 aa27.18■■□□□ 1.94
CBWD3-213ENST00000618217 TNNI2P48788 182 aa27.18■■□□□ 1.94
CBWD3-213ENST00000618217 SH3BP5LQ7L8J4 393 aa27.18■■□□□ 1.94
CBWD3-213ENST00000618217 TMEM39BQ9GZU3 492 aa27.18■■□□□ 1.94
CBWD3-213ENST00000618217 OSBPL5Q9H0X9 879 aaPredicted RBP27.18■■□□□ 1.94
CBWD3-213ENST00000618217 PPP2R3BQ9Y5P8 575 aa27.18■■□□□ 1.94
CBWD3-213ENST00000618217 ITGBL1O95965 494 aaPredicted RBP27.17■■□□□ 1.94
CBWD3-213ENST00000618217 MFAP1P55081 439 aaKnown RBP27.17■■□□□ 1.94
CBWD3-213ENST00000618217 COL2A1P02458 1487 aaPredicted RBP27.17■■□□□ 1.94
CBWD3-213ENST00000618217 ATRNL1Q5VV63 1379 aa27.17■■□□□ 1.94
CBWD3-213ENST00000618217 RPAP1Q9BWH6 1393 aaPredicted RBP27.17■■□□□ 1.94
CBWD3-213ENST00000618217 HSPD1P10809 573 aaKnown RBP27.16■■□□□ 1.94
CBWD3-213ENST00000618217 GIMAP6Q6P9H5 292 aa27.16■■□□□ 1.94
CBWD3-213ENST00000618217 CDAN1Q8IWY9 1227 aa27.16■■□□□ 1.94
CBWD3-213ENST00000618217 RBM46Q8TBY0 533 aaKnown RBP27.16■■□□□ 1.94
CBWD3-213ENST00000618217 EPB41L4AQ9HCS5 686 aaPredicted RBP27.16■■□□□ 1.94
CBWD3-213ENST00000618217 CASC1Q6TDU7 716 aa27.16■■□□□ 1.94
CBWD3-213ENST00000618217 DDTLA6NHG4 134 aaPredicted RBP27.15■■□□□ 1.94
CBWD3-213ENST00000618217 PRAMEF18Q5VWM3 479 aa27.15■■□□□ 1.94
CBWD3-213ENST00000618217 IFNL3Q8IZI9 196 aa27.14■■□□□ 1.94
CBWD3-213ENST00000618217 TRAF5O00463 557 aa27.13■■□□□ 1.93
CBWD3-213ENST00000618217 ALX1Q15699 326 aa27.13■■□□□ 1.93
CBWD3-213ENST00000618217 SMC1BQ8NDV3 1235 aa27.13■■□□□ 1.93
CBWD3-213ENST00000618217 SAP30BPQ9UHR5 308 aaKnown RBP27.13■■□□□ 1.93
CBWD3-213ENST00000618217 PALD1Q9ULE6 856 aa27.13■■□□□ 1.93
CBWD3-213ENST00000618217 SIPA1L1O43166 1804 aa27.13■■□□□ 1.93
CBWD3-213ENST00000618217 MCM9Q9NXL9 1143 aa27.12■■□□□ 1.93
CBWD3-213ENST00000618217 APPP05067 770 aa27.12■■□□□ 1.93
CBWD3-213ENST00000618217 PTH1RQ03431 593 aa27.12■■□□□ 1.93
CBWD3-213ENST00000618217 FMR1Q06787 632 aaKnown RBP eCLIP27.12■■□□□ 1.93
CBWD3-213ENST00000618217 NBPF12Q5TAG4 269 aaPredicted RBP27.12■■□□□ 1.93
CBWD3-213ENST00000618217 CTR9Q6PD62 1173 aa27.12■■□□□ 1.93
CBWD3-213ENST00000618217 CDCA5Q96FF9 252 aa27.12■■□□□ 1.93
CBWD3-213ENST00000618217 DSCC1Q9BVC3 393 aa27.12■■□□□ 1.93
CBWD3-213ENST00000618217 DHX36Q9H2U1 1008 aaKnown RBP27.12■■□□□ 1.93
CBWD3-213ENST00000618217 SSC5DA1L4H1 1573 aa27.1■■□□□ 1.93
CBWD3-213ENST00000618217 USP17L12C9JPN9 530 aa27.1■■□□□ 1.93
CBWD3-213ENST00000618217 USP17L21D6R901 530 aa27.1■■□□□ 1.93
CBWD3-213ENST00000618217 FGAP02671 866 aa27.1■■□□□ 1.93
CBWD3-213ENST00000618217 SBK1Q52WX2 424 aa27.1■■□□□ 1.93
CBWD3-213ENST00000618217 ZSCAN29Q8IWY8 852 aaPredicted RBP27.1■■□□□ 1.93
CBWD3-213ENST00000618217 NACAP1Q9BZK3 213 aa27.1■■□□□ 1.93
CBWD3-213ENST00000618217 LSG1Q9H089 658 aaKnown RBP27.1■■□□□ 1.93
CBWD3-213ENST00000618217 DDRGK1Q96HY6 314 aa27.09■■□□□ 1.93
CBWD3-213ENST00000618217 CSRNP1Q96S65 589 aa27.09■■□□□ 1.93
CBWD3-213ENST00000618217 ZMYM6O95789 1325 aa27.09■■□□□ 1.93
CBWD3-213ENST00000618217 PASKQ96RG2 1323 aa27.09■■□□□ 1.93
CBWD3-213ENST00000618217 TRPM7Q96QT4 1865 aa27.09■■□□□ 1.93
CBWD3-213ENST00000618217 CYP2D6P10635 497 aa27.08■■□□□ 1.93
CBWD3-213ENST00000618217 PLCD1P51178 756 aa27.08■■□□□ 1.93
CBWD3-213ENST00000618217 EVX2Q03828 476 aa27.08■■□□□ 1.93
CBWD3-213ENST00000618217 FSTL1Q12841 308 aa27.08■■□□□ 1.93
CBWD3-213ENST00000618217 C8orf34Q49A92 452 aa27.08■■□□□ 1.93
CBWD3-213ENST00000618217 C12orf60Q5U649 245 aa27.08■■□□□ 1.93
CBWD3-213ENST00000618217 MAP3K10Q02779 954 aa27.08■■□□□ 1.93
CBWD3-213ENST00000618217 METTL16Q86W50 562 aaKnown RBP27.08■■□□□ 1.93
CBWD3-213ENST00000618217 MAP4K1Q92918 833 aa27.08■■□□□ 1.93
CBWD3-213ENST00000618217 NAPBQ9H115 298 aa27.08■■□□□ 1.93
CBWD3-213ENST00000618217 PI4KBQ9UBF8 816 aa27.08■■□□□ 1.93
CBWD3-213ENST00000618217 LAMB1P07942 1786 aa27.08■■□□□ 1.92
CBWD3-213ENST00000618217 CYP2D7A0A087X1C5 515 aa27.07■■□□□ 1.92
CBWD3-213ENST00000618217 SMIM22K7EJ46 135 aa27.07■■□□□ 1.92
CBWD3-213ENST00000618217 TDO2P48775 406 aa27.07■■□□□ 1.92
CBWD3-213ENST00000618217 SUPT20HL1Q3ZLR7 823 aa27.07■■□□□ 1.92
CBWD3-213ENST00000618217 TTC6Q86TZ1 520 aa27.07■■□□□ 1.92
CBWD3-213ENST00000618217 ARPP21Q9UBL0 812 aaPredicted RBP27.07■■□□□ 1.92
CBWD3-213ENST00000618217 SLC4A8Q2Y0W8 1093 aa27.06■■□□□ 1.92
CBWD3-213ENST00000618217 POLR3DP05423 398 aaPredicted RBP27.05■■□□□ 1.92
CBWD3-213ENST00000618217 SLURP2P0DP57 97 aa27.05■■□□□ 1.92
CBWD3-213ENST00000618217 KIAA1211Q6ZU35 1233 aa27.05■■□□□ 1.92
CBWD3-213ENST00000618217 EHD4Q9H223 541 aa27.05■■□□□ 1.92
CBWD3-213ENST00000618217 ANO2Q9NQ90 1003 aa27.05■■□□□ 1.92
CBWD3-213ENST00000618217 FOXP4Q8IVH2 680 aaPredicted RBP27.05■■□□□ 1.92
CBWD3-213ENST00000618217 TBC1D12O60347 775 aa27.04■■□□□ 1.92
CBWD3-213ENST00000618217 HLA-DOAP06340 250 aa27.04■■□□□ 1.92
CBWD3-213ENST00000618217 GABPAQ06546 454 aa27.04■■□□□ 1.92
CBWD3-213ENST00000618217 CST9Q5W186 159 aa27.04■■□□□ 1.92
CBWD3-213ENST00000618217 LAMA4Q16363 1823 aa27.04■■□□□ 1.92
CBWD3-213ENST00000618217 MIGA2Q7L4E1 593 aa27.03■■□□□ 1.92
CBWD3-213ENST00000618217 HOOK2Q96ED9 719 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms