RNA–Protein interactions for RNA: ENST00000617769.1

PCDHA13-203, Transcript of protocadherin alpha 13, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA13, Length 2,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-203ENST00000617769 TRDNQ13061 729 aa23.13■■□□□ 1.29
PCDHA13-203ENST00000617769 AXDND1Q5T1B0 1012 aaPredicted RBP23.13■■□□□ 1.29
PCDHA13-203ENST00000617769 CEP135Q66GS9 1140 aa23.13■■□□□ 1.29
PCDHA13-203ENST00000617769 STK11IPQ8N1F8 1099 aa23.13■■□□□ 1.29
PCDHA13-203ENST00000617769 CELF1Q92879 486 aaKnown RBP23.13■■□□□ 1.29
PCDHA13-203ENST00000617769 CBX1P83916 185 aa23.13■■□□□ 1.29
PCDHA13-203ENST00000617769 CYB5R4Q7L1T6 521 aa23.13■■□□□ 1.29
PCDHA13-203ENST00000617769 CCDC112Q8NEF3 446 aa23.13■■□□□ 1.29
PCDHA13-203ENST00000617769 PRDM10Q9NQV6 1147 aa23.13■■□□□ 1.29
PCDHA13-203ENST00000617769 CCNL1Q9UK58 526 aaPredicted RBP23.13■■□□□ 1.29
PCDHA13-203ENST00000617769 MARCKSP29966 332 aaPredicted RBP23.12■■□□□ 1.29
PCDHA13-203ENST00000617769 MAP3K12Q12852 859 aa23.12■■□□□ 1.29
PCDHA13-203ENST00000617769 ANKRD18AQ8IVF6 992 aa23.12■■□□□ 1.29
PCDHA13-203ENST00000617769 MIGA1Q8NAN2 632 aa23.12■■□□□ 1.29
PCDHA13-203ENST00000617769 CDC5LQ99459 802 aaKnown RBP23.12■■□□□ 1.29
PCDHA13-203ENST00000617769 ANGEL1Q9UNK9 670 aaKnown RBP23.12■■□□□ 1.29
PCDHA13-203ENST00000617769 WDR19Q8NEZ3 1342 aa23.12■■□□□ 1.29
PCDHA13-203ENST00000617769 SLC3A2P08195 630 aaKnown RBP23.12■■□□□ 1.29
PCDHA13-203ENST00000617769 WDHD1O75717 1129 aaPredicted RBP23.11■■□□□ 1.29
PCDHA13-203ENST00000617769 PFKFB1P16118 471 aa23.11■■□□□ 1.29
PCDHA13-203ENST00000617769 NAA30Q147X3 362 aaPredicted RBP23.11■■□□□ 1.29
PCDHA13-203ENST00000617769 EPB41L4AQ9HCS5 686 aaPredicted RBP23.11■■□□□ 1.29
PCDHA13-203ENST00000617769 TRMT1Q9NXH9 659 aaKnown RBP23.11■■□□□ 1.29
PCDHA13-203ENST00000617769 SMAP1Q8IYB5 467 aaPredicted RBP23.11■■□□□ 1.29
PCDHA13-203ENST00000617769 SENP2Q9HC62 589 aa23.11■■□□□ 1.29
PCDHA13-203ENST00000617769 ABCF2Q9UG63 623 aa23.11■■□□□ 1.29
PCDHA13-203ENST00000617769 MROH7-TTC4A0A0A0MT08 1334 aa23.11■■□□□ 1.29
PCDHA13-203ENST00000617769 CNTNAP4Q9C0A0 1308 aa23.11■■□□□ 1.29
PCDHA13-203ENST00000617769 C4AP0C0L4 1744 aa23.1■■□□□ 1.29
PCDHA13-203ENST00000617769 C4BP0C0L5 1744 aa23.1■■□□□ 1.29
PCDHA13-203ENST00000617769 B4E1Z4 1266 aa23.1■■□□□ 1.29
PCDHA13-203ENST00000617769 METAP2P50579 478 aaKnown RBP eCLIP23.1■■□□□ 1.29
PCDHA13-203ENST00000617769 CTDSPL2Q05D32 466 aa23.1■■□□□ 1.29
PCDHA13-203ENST00000617769 ALG1Q9BT22 464 aa23.1■■□□□ 1.29
PCDHA13-203ENST00000617769 BCL11BQ9C0K0 894 aaPredicted RBP23.1■■□□□ 1.29
PCDHA13-203ENST00000617769 LRP2BPQ9P2M1 347 aa23.1■■□□□ 1.29
PCDHA13-203ENST00000617769 ZMYM6O95789 1325 aa23.1■■□□□ 1.29
PCDHA13-203ENST00000617769 RTL9Q8NET4 1388 aa23.1■■□□□ 1.29
PCDHA13-203ENST00000617769 CMA1P23946 247 aa23.1■■□□□ 1.29
PCDHA13-203ENST00000617769 PTPN14Q15678 1187 aa23.1■■□□□ 1.29
PCDHA13-203ENST00000617769 NYAP1Q6ZVC0 841 aa23.1■■□□□ 1.29
PCDHA13-203ENST00000617769 LCORLQ8N3X6 602 aa23.1■■□□□ 1.29
PCDHA13-203ENST00000617769 PHKBQ93100 1093 aa23.1■■□□□ 1.29
PCDHA13-203ENST00000617769 XPO4Q9C0E2 1151 aaKnown RBP23.1■■□□□ 1.29
PCDHA13-203ENST00000617769 ATRNO75882 1429 aa23.09■■□□□ 1.29
PCDHA13-203ENST00000617769 U2AF2P26368 475 aaKnown RBP eCLIP23.09■■□□□ 1.29
PCDHA13-203ENST00000617769 MEX3CQ5U5Q3 659 aaKnown RBP23.09■■□□□ 1.29
PCDHA13-203ENST00000617769 ISM2Q6H9L7 571 aa23.09■■□□□ 1.29
PCDHA13-203ENST00000617769 VPS37DQ86XT2 251 aa23.09■■□□□ 1.29
PCDHA13-203ENST00000617769 SETDB2Q96T68 719 aa23.09■■□□□ 1.29
PCDHA13-203ENST00000617769 BPIFA3Q9BQP9 254 aa23.09■■□□□ 1.29
PCDHA13-203ENST00000617769 SPDYE4A6NLX3 237 aa23.09■■□□□ 1.29
PCDHA13-203ENST00000617769 SH2B2O14492 632 aaPredicted RBP23.09■■□□□ 1.29
PCDHA13-203ENST00000617769 ZPR1O75312 459 aa23.09■■□□□ 1.29
PCDHA13-203ENST00000617769 RPS6KA4O75676 772 aa23.09■■□□□ 1.29
PCDHA13-203ENST00000617769 SMC2O95347 1197 aa23.09■■□□□ 1.29
PCDHA13-203ENST00000617769 CDC27P30260 824 aa23.09■■□□□ 1.29
PCDHA13-203ENST00000617769 SLC39A14Q15043 492 aa23.09■■□□□ 1.29
PCDHA13-203ENST00000617769 SF3B3Q15393 1217 aaKnown RBP23.09■■□□□ 1.29
PCDHA13-203ENST00000617769 MICU3Q86XE3 530 aa23.09■■□□□ 1.29
PCDHA13-203ENST00000617769 IFNL3Q8IZI9 196 aa23.09■■□□□ 1.29
PCDHA13-203ENST00000617769 IFNKQ9P0W0 207 aa23.09■■□□□ 1.29
PCDHA13-203ENST00000617769 NARFQ9UHQ1 456 aa23.09■■□□□ 1.29
PCDHA13-203ENST00000617769 MINPP1Q9UNW1 487 aa23.09■■□□□ 1.29
PCDHA13-203ENST00000617769 KLRK1P26718 216 aa23.08■■□□□ 1.29
PCDHA13-203ENST00000617769 SLC51AQ86UW1 340 aa23.08■■□□□ 1.29
PCDHA13-203ENST00000617769 NBPF5PQ86XG9 351 aaPredicted RBP23.08■■□□□ 1.29
PCDHA13-203ENST00000617769 TACC3Q9Y6A5 838 aa23.08■■□□□ 1.29
PCDHA13-203ENST00000617769 GSDMDP57764 484 aa23.08■■□□□ 1.28
PCDHA13-203ENST00000617769 NLRP12P59046 1061 aa23.08■■□□□ 1.28
PCDHA13-203ENST00000617769 KRT40Q6A162 431 aa23.08■■□□□ 1.28
PCDHA13-203ENST00000617769 APOA5Q6Q788 366 aa23.08■■□□□ 1.28
PCDHA13-203ENST00000617769 ADGRA1Q86SQ6 560 aa23.08■■□□□ 1.28
PCDHA13-203ENST00000617769 CCAR2Q8N163 923 aaKnown RBP23.08■■□□□ 1.28
PCDHA13-203ENST00000617769 ARHGEF1Q92888 912 aaKnown RBP23.08■■□□□ 1.28
PCDHA13-203ENST00000617769 OSBPL5Q9H0X9 879 aaPredicted RBP23.08■■□□□ 1.28
PCDHA13-203ENST00000617769 PKNOX2Q96KN3 472 aa23.07■■□□□ 1.28
PCDHA13-203ENST00000617769 NAPBQ9H115 298 aa23.07■■□□□ 1.28
PCDHA13-203ENST00000617769 CICQ96RK0 1608 aaPredicted RBP23.07■■□□□ 1.28
PCDHA13-203ENST00000617769 PATL2C9JE40 543 aaKnown RBP23.07■■□□□ 1.28
PCDHA13-203ENST00000617769 BCORQ6W2J9 1755 aa23.06■■□□□ 1.28
PCDHA13-203ENST00000617769 GSG1L2A8MUP6 293 aa23.06■■□□□ 1.28
PCDHA13-203ENST00000617769 NCAPHQ15003 741 aa23.06■■□□□ 1.28
PCDHA13-203ENST00000617769 SYCP1Q15431 976 aa23.06■■□□□ 1.28
PCDHA13-203ENST00000617769 BSDC1Q9NW68 430 aaPredicted RBP23.06■■□□□ 1.28
PCDHA13-203ENST00000617769 RTCBQ9Y3I0 505 aaKnown RBP23.06■■□□□ 1.28
PCDHA13-203ENST00000617769 ARAP2Q8WZ64 1704 aa23.06■■□□□ 1.28
PCDHA13-203ENST00000617769 TMC6Q7Z403 805 aa23.06■■□□□ 1.28
PCDHA13-203ENST00000617769 MYL10Q9BUA6 226 aa23.06■■□□□ 1.28
PCDHA13-203ENST00000617769 IMPACTQ9P2X3 320 aa23.06■■□□□ 1.28
PCDHA13-203ENST00000617769 SLC4A4Q9Y6R1 1079 aa23.06■■□□□ 1.28
PCDHA13-203ENST00000617769 CDKL5O76039 1030 aa23.05■■□□□ 1.28
PCDHA13-203ENST00000617769 SYKP43405 635 aa23.05■■□□□ 1.28
PCDHA13-203ENST00000617769 GNL2Q13823 731 aaKnown RBP23.05■■□□□ 1.28
PCDHA13-203ENST00000617769 GJD4Q96KN9 370 aaPredicted RBP23.05■■□□□ 1.28
PCDHA13-203ENST00000617769 BTAF1O14981 1849 aa23.05■■□□□ 1.28
PCDHA13-203ENST00000617769 UBE2Q2LH0YL09 131 aa23.04■■□□□ 1.28
PCDHA13-203ENST00000617769 IGDCC4Q8TDY8 1250 aa23.04■■□□□ 1.28
PCDHA13-203ENST00000617769 RAI14Q9P0K7 980 aa23.04■■□□□ 1.28
PCDHA13-203ENST00000617769 SMIM22K7EJ46 135 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms