RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 SLMAPQ14BN4 828 aa8.3□□□□□ -1.08
PDE6A-205ENST00000617647 CCDC57Q2TAC2 916 aa8.3□□□□□ -1.08
PDE6A-205ENST00000617647 TBC1D1Q86TI0 1168 aaPredicted RBP8.3□□□□□ -1.08
PDE6A-205ENST00000617647 DHX40Q8IX18 779 aaKnown RBP8.3□□□□□ -1.08
PDE6A-205ENST00000617647 BICD1Q96G01 975 aa8.3□□□□□ -1.08
PDE6A-205ENST00000617647 GBP5Q96PP8 586 aa8.3□□□□□ -1.08
PDE6A-205ENST00000617647 TCHPQ9BT92 498 aa8.3□□□□□ -1.08
PDE6A-205ENST00000617647 CDHR2Q9BYE9 1310 aa8.3□□□□□ -1.08
PDE6A-205ENST00000617647 RASSF10A6NK89 507 aa8.3□□□□□ -1.08
PDE6A-205ENST00000617647 MYO1BO43795 1136 aa8.3□□□□□ -1.08
PDE6A-205ENST00000617647 PDHA1P08559 390 aa8.3□□□□□ -1.08
PDE6A-205ENST00000617647 CTCFP49711 727 aaPredicted RBP8.3□□□□□ -1.08
PDE6A-205ENST00000617647 MRPL12P52815 198 aaKnown RBP8.3□□□□□ -1.08
PDE6A-205ENST00000617647 ZC3H12AQ5D1E8 599 aaKnown RBP8.3□□□□□ -1.08
PDE6A-205ENST00000617647 RASIP1Q5U651 963 aa8.3□□□□□ -1.08
PDE6A-205ENST00000617647 GKAP1Q5VSY0 366 aaPredicted RBP8.3□□□□□ -1.08
PDE6A-205ENST00000617647 RNF25Q96BH1 459 aaPredicted RBP8.3□□□□□ -1.08
PDE6A-205ENST00000617647 SELENOOQ9BVL4 669 aa8.3□□□□□ -1.08
PDE6A-205ENST00000617647 ZCWPW1Q9H0M4 648 aa8.3□□□□□ -1.08
PDE6A-205ENST00000617647 VCPKMTQ9H867 229 aa8.3□□□□□ -1.08
PDE6A-205ENST00000617647 CHD1O14646 1710 aa8.3□□□□□ -1.08
PDE6A-205ENST00000617647 HGSO14964 777 aaPredicted RBP8.29□□□□□ -1.08
PDE6A-205ENST00000617647 UBTFL1P0CB47 393 aaPredicted RBP8.29□□□□□ -1.08
PDE6A-205ENST00000617647 NLRP12P59046 1061 aa8.29□□□□□ -1.08
PDE6A-205ENST00000617647 NNTQ13423 1086 aa8.29□□□□□ -1.08
PDE6A-205ENST00000617647 EFCAB2Q5VUJ9 269 aa8.29□□□□□ -1.08
PDE6A-205ENST00000617647 CCDC129Q6ZRS4 1044 aa8.29□□□□□ -1.08
PDE6A-205ENST00000617647 COG1Q8WTW3 980 aa8.29□□□□□ -1.08
PDE6A-205ENST00000617647 CDC5LQ99459 802 aaKnown RBP8.29□□□□□ -1.08
PDE6A-205ENST00000617647 KIAA1468Q9P260 1216 aa8.29□□□□□ -1.08
PDE6A-205ENST00000617647 IL16Q14005 1332 aa8.29□□□□□ -1.08
PDE6A-205ENST00000617647 TTC37Q6PGP7 1564 aa8.29□□□□□ -1.08
PDE6A-205ENST00000617647 HIP1RO75146 1068 aa8.29□□□□□ -1.08
PDE6A-205ENST00000617647 TSNAXIP1Q2TAA8 658 aa8.29□□□□□ -1.08
PDE6A-205ENST00000617647 C11orf91Q3C1V1 193 aa8.29□□□□□ -1.08
PDE6A-205ENST00000617647 AMOTQ4VCS5 1084 aa8.29□□□□□ -1.08
PDE6A-205ENST00000617647 SPATA21Q7Z572 469 aa8.29□□□□□ -1.08
PDE6A-205ENST00000617647 KCNB2Q92953 911 aa8.29□□□□□ -1.08
PDE6A-205ENST00000617647 TTF2Q9UNY4 1162 aaKnown RBP8.29□□□□□ -1.08
PDE6A-205ENST00000617647 CEP104O60308 925 aa8.29□□□□□ -1.08
PDE6A-205ENST00000617647 ZNF189O75820 626 aaPredicted RBP8.29□□□□□ -1.08
PDE6A-205ENST00000617647 FSBPO95073 299 aa8.29□□□□□ -1.08
PDE6A-205ENST00000617647 CNGA1P29973 690 aa8.29□□□□□ -1.08
PDE6A-205ENST00000617647 SYKP43405 635 aa8.29□□□□□ -1.08
PDE6A-205ENST00000617647 KCNJ6P48051 423 aa8.29□□□□□ -1.08
PDE6A-205ENST00000617647 DYNC1I2Q13409 638 aaKnown RBP8.29□□□□□ -1.08
PDE6A-205ENST00000617647 CCDC92Q53HC0 331 aaPredicted RBP8.29□□□□□ -1.08
PDE6A-205ENST00000617647 CLASRPQ8N2M8 674 aaKnown RBP8.29□□□□□ -1.08
PDE6A-205ENST00000617647 KCNV2Q8TDN2 545 aa8.29□□□□□ -1.08
PDE6A-205ENST00000617647 PGBD1Q96JS3 809 aa8.29□□□□□ -1.08
PDE6A-205ENST00000617647 SAMD15Q9P1V8 674 aa8.29□□□□□ -1.08
PDE6A-205ENST00000617647 HPCAL4Q9UM19 191 aa8.29□□□□□ -1.08
PDE6A-205ENST00000617647 DUOX2Q9NRD8 1548 aa8.28□□□□□ -1.08
PDE6A-205ENST00000617647 ENC1O14682 589 aa8.28□□□□□ -1.08
PDE6A-205ENST00000617647 YEATS4O95619 227 aa8.28□□□□□ -1.08
PDE6A-205ENST00000617647 FERP16591 822 aa8.28□□□□□ -1.08
PDE6A-205ENST00000617647 GUCY1A3Q02108 690 aa8.28□□□□□ -1.08
PDE6A-205ENST00000617647 DIXDC1Q155Q3 683 aa8.28□□□□□ -1.08
PDE6A-205ENST00000617647 IMMTQ16891 758 aaKnown RBP8.28□□□□□ -1.08
PDE6A-205ENST00000617647 FAM81AQ8TBF8 368 aa8.28□□□□□ -1.08
PDE6A-205ENST00000617647 ZNF473Q8WTR7 871 aaKnown RBP8.28□□□□□ -1.08
PDE6A-205ENST00000617647 RHBDL2Q9NX52 303 aa8.28□□□□□ -1.08
PDE6A-205ENST00000617647 ABCF2Q9UG63 623 aa8.28□□□□□ -1.08
PDE6A-205ENST00000617647 F6X3S4 739 aa8.28□□□□□ -1.08
PDE6A-205ENST00000617647 VAMP4O75379 141 aa8.28□□□□□ -1.08
PDE6A-205ENST00000617647 NLRP14Q86W24 1093 aa8.28□□□□□ -1.08
PDE6A-205ENST00000617647 MFN1Q8IWA4 741 aa8.28□□□□□ -1.08
PDE6A-205ENST00000617647 RASEFQ8IZ41 740 aa8.28□□□□□ -1.08
PDE6A-205ENST00000617647 TEKT4Q8WW24 435 aa8.28□□□□□ -1.08
PDE6A-205ENST00000617647 CTNNBL1Q8WYA6 563 aaPredicted RBP8.28□□□□□ -1.08
PDE6A-205ENST00000617647 STAMBPL1Q96FJ0 436 aa8.28□□□□□ -1.08
PDE6A-205ENST00000617647 ALS2CR12Q96Q35 445 aa8.28□□□□□ -1.08
PDE6A-205ENST00000617647 ANKZF1Q9H8Y5 726 aa8.28□□□□□ -1.08
PDE6A-205ENST00000617647 PLXNC1O60486 1568 aa8.28□□□□□ -1.08
PDE6A-205ENST00000617647 JAK2O60674 1132 aa8.28□□□□□ -1.08
PDE6A-205ENST00000617647 TRIM29Q14134 588 aa8.28□□□□□ -1.08
PDE6A-205ENST00000617647 NKX1-1Q15270 411 aaPredicted RBP8.28□□□□□ -1.08
PDE6A-205ENST00000617647 MAP7D1Q3KQU3 841 aa8.28□□□□□ -1.08
PDE6A-205ENST00000617647 TRIM65Q6PJ69 517 aa8.28□□□□□ -1.08
PDE6A-205ENST00000617647 AIDAQ96BJ3 306 aa8.28□□□□□ -1.08
PDE6A-205ENST00000617647 CARD14Q9BXL6 1004 aa8.28□□□□□ -1.08
PDE6A-205ENST00000617647 VIPAS39Q9H9C1 493 aa8.28□□□□□ -1.08
PDE6A-205ENST00000617647 NOD2Q9HC29 1040 aa8.28□□□□□ -1.08
PDE6A-205ENST00000617647 FAM184BQ9ULE4 1060 aa8.28□□□□□ -1.08
PDE6A-205ENST00000617647 MAGI2Q86UL8 1455 aa8.27□□□□□ -1.08
PDE6A-205ENST00000617647 CCDC160A6NGH7 325 aa8.27□□□□□ -1.08
PDE6A-205ENST00000617647 SOWAHDA6NJG2 315 aa8.27□□□□□ -1.08
PDE6A-205ENST00000617647 EVI5O60447 810 aa8.27□□□□□ -1.08
PDE6A-205ENST00000617647 PFKFB2O60825 505 aa8.27□□□□□ -1.08
PDE6A-205ENST00000617647 GBP1P32455 592 aa8.27□□□□□ -1.08
PDE6A-205ENST00000617647 CCT4P50991 539 aaKnown RBP8.27□□□□□ -1.08
PDE6A-205ENST00000617647 CFAP70Q5T0N1 1121 aa8.27□□□□□ -1.08
PDE6A-205ENST00000617647 CCDC122Q5T0U0 273 aa8.27□□□□□ -1.08
PDE6A-205ENST00000617647 TCERG1LQ5VWI1 586 aa8.27□□□□□ -1.08
PDE6A-205ENST00000617647 SH2D3CQ8N5H7 860 aa8.27□□□□□ -1.08
PDE6A-205ENST00000617647 RASSF8Q8NHQ8 419 aa8.27□□□□□ -1.08
PDE6A-205ENST00000617647 CCHCR1Q8TD31 782 aa8.27□□□□□ -1.08
PDE6A-205ENST00000617647 HVCN1Q96D96 273 aa8.27□□□□□ -1.08
PDE6A-205ENST00000617647 SELENOSQ9BQE4 189 aa8.27□□□□□ -1.08
PDE6A-205ENST00000617647 SLF1Q9BQI6 1058 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms