RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 SURF6O75683 361 aaKnown RBP27.37■■□□□ 1.97
NEDD4L-237ENST00000617539 SLURP2P0DP57 97 aa27.37■■□□□ 1.97
NEDD4L-237ENST00000617539 PPATQ06203 517 aa27.37■■□□□ 1.97
NEDD4L-237ENST00000617539 SNAPC2Q13487 334 aa27.37■■□□□ 1.97
NEDD4L-237ENST00000617539 TAF1CQ15572 869 aaPredicted RBP27.37■■□□□ 1.97
NEDD4L-237ENST00000617539 NOL9Q5SY16 702 aaKnown RBP27.37■■□□□ 1.97
NEDD4L-237ENST00000617539 PANK1Q8TE04 598 aa27.37■■□□□ 1.97
NEDD4L-237ENST00000617539 ERO1AQ96HE7 468 aa27.37■■□□□ 1.97
NEDD4L-237ENST00000617539 DBNDD2Q9BQY9 259 aa27.37■■□□□ 1.97
NEDD4L-237ENST00000617539 NOP58Q9Y2X3 529 aaKnown RBP27.37■■□□□ 1.97
NEDD4L-237ENST00000617539 DDTLA6NHG4 134 aaPredicted RBP27.36■■□□□ 1.97
NEDD4L-237ENST00000617539 PHF20L1A8MW92 1017 aa27.36■■□□□ 1.97
NEDD4L-237ENST00000617539 SP3Q02447 781 aa27.36■■□□□ 1.97
NEDD4L-237ENST00000617539 UQCRFS1P1P0C7P4 283 aa27.35■■□□□ 1.97
NEDD4L-237ENST00000617539 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.35■■□□□ 1.97
NEDD4L-237ENST00000617539 DOCK1Q14185 1865 aa27.35■■□□□ 1.97
NEDD4L-237ENST00000617539 PHIPQ8WWQ0 1821 aa27.34■■□□□ 1.97
NEDD4L-237ENST00000617539 MAP3K10Q02779 954 aa27.34■■□□□ 1.97
NEDD4L-237ENST00000617539 OS9Q13438 667 aaPredicted RBP27.34■■□□□ 1.97
NEDD4L-237ENST00000617539 PICALMQ13492 652 aa27.34■■□□□ 1.97
NEDD4L-237ENST00000617539 CEP85Q6P2H3 762 aa27.34■■□□□ 1.97
NEDD4L-237ENST00000617539 ZFYVE28Q9HCC9 887 aa27.34■■□□□ 1.97
NEDD4L-237ENST00000617539 KCNH4Q9UQ05 1017 aa27.34■■□□□ 1.97
NEDD4L-237ENST00000617539 CDK5RAP2Q96SN8 1893 aa27.34■■□□□ 1.97
NEDD4L-237ENST00000617539 MOGSQ13724 837 aa27.33■■□□□ 1.97
NEDD4L-237ENST00000617539 ZCCHC17Q9NP64 241 aaKnown RBP27.33■■□□□ 1.97
NEDD4L-237ENST00000617539 SNRKQ9NRH2 765 aa27.33■■□□□ 1.97
NEDD4L-237ENST00000617539 PTPRFP10586 1907 aa27.33■■□□□ 1.97
NEDD4L-237ENST00000617539 TLR7Q9NYK1 1049 aaKnown RBP27.32■■□□□ 1.96
NEDD4L-237ENST00000617539 RAI14Q9P0K7 980 aa27.32■■□□□ 1.96
NEDD4L-237ENST00000617539 DBNLQ9UJU6 430 aaKnown RBP27.32■■□□□ 1.96
NEDD4L-237ENST00000617539 PTPN22Q9Y2R2 807 aa27.32■■□□□ 1.96
NEDD4L-237ENST00000617539 GSTO1P78417 241 aa27.31■■□□□ 1.96
NEDD4L-237ENST00000617539 TTC39AQ5SRH9 613 aa27.31■■□□□ 1.96
NEDD4L-237ENST00000617539 ZSCAN29Q8IWY8 852 aaPredicted RBP27.31■■□□□ 1.96
NEDD4L-237ENST00000617539 EFCC1Q9HA90 598 aa27.31■■□□□ 1.96
NEDD4L-237ENST00000617539 FOCADQ5VW36 1801 aa27.3■■□□□ 1.96
NEDD4L-237ENST00000617539 BRCA2P51587 3418 aa27.3■■□□□ 1.96
NEDD4L-237ENST00000617539 TLR2O60603 784 aa27.3■■□□□ 1.96
NEDD4L-237ENST00000617539 NPM3O75607 178 aaKnown RBP27.3■■□□□ 1.96
NEDD4L-237ENST00000617539 LRP2BPQ9P2M1 347 aa27.3■■□□□ 1.96
NEDD4L-237ENST00000617539 SIPA1L1O43166 1804 aa27.3■■□□□ 1.96
NEDD4L-237ENST00000617539 CYP2E1P05181 493 aaPredicted RBP27.29■■□□□ 1.96
NEDD4L-237ENST00000617539 LDHCP07864 332 aa27.29■■□□□ 1.96
NEDD4L-237ENST00000617539 SCYL3Q8IZE3 742 aa27.29■■□□□ 1.96
NEDD4L-237ENST00000617539 EAF2Q96CJ1 260 aaPredicted RBP27.29■■□□□ 1.96
NEDD4L-237ENST00000617539 ZNF512BQ96KM6 892 aaPredicted RBP27.29■■□□□ 1.96
NEDD4L-237ENST00000617539 COL2A1P02458 1487 aaPredicted RBP27.29■■□□□ 1.96
NEDD4L-237ENST00000617539 RBBP6Q7Z6E9 1792 aaKnown RBP27.28■■□□□ 1.96
NEDD4L-237ENST00000617539 CCDC158Q5M9N0 1113 aa27.28■■□□□ 1.96
NEDD4L-237ENST00000617539 ANKRD23Q86SG2 305 aa27.28■■□□□ 1.96
NEDD4L-237ENST00000617539 ATAD5Q96QE3 1844 aa27.27■■□□□ 1.96
NEDD4L-237ENST00000617539 ADGRA2Q96PE1 1338 aa27.27■■□□□ 1.96
NEDD4L-237ENST00000617539 PTPRAP18433 802 aa27.27■■□□□ 1.96
NEDD4L-237ENST00000617539 ADGRA1Q86SQ6 560 aa27.27■■□□□ 1.96
NEDD4L-237ENST00000617539 CCDC8Q9H0W5 538 aaPredicted RBP27.27■■□□□ 1.96
NEDD4L-237ENST00000617539 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.27■■□□□ 1.96
NEDD4L-237ENST00000617539 MKI67P46013 3256 aaKnown RBP27.26■■□□□ 1.96
NEDD4L-237ENST00000617539 FAM196BA6NMK8 535 aa27.26■■□□□ 1.95
NEDD4L-237ENST00000617539 MAP4K4O95819 1239 aaPredicted RBP27.26■■□□□ 1.95
NEDD4L-237ENST00000617539 ZAP70P43403 619 aa27.26■■□□□ 1.95
NEDD4L-237ENST00000617539 SH3RF3Q8TEJ3 882 aaPredicted RBP27.26■■□□□ 1.95
NEDD4L-237ENST00000617539 ARHGAP39Q9C0H5 1083 aa27.26■■□□□ 1.95
NEDD4L-237ENST00000617539 OSBPL5Q9H0X9 879 aaPredicted RBP27.26■■□□□ 1.95
NEDD4L-237ENST00000617539 EXOC6BQ9Y2D4 811 aa27.26■■□□□ 1.95
NEDD4L-237ENST00000617539 PDHXO00330 501 aa27.25■■□□□ 1.95
NEDD4L-237ENST00000617539 GPAT2Q6NUI2 795 aa27.25■■□□□ 1.95
NEDD4L-237ENST00000617539 PIH1D3Q9NQM4 214 aaKnown RBP27.25■■□□□ 1.95
NEDD4L-237ENST00000617539 ZHX2Q9Y6X8 837 aa27.25■■□□□ 1.95
NEDD4L-237ENST00000617539 CXCL11O14625 94 aa27.24■■□□□ 1.95
NEDD4L-237ENST00000617539 TBC1D12O60347 775 aa27.24■■□□□ 1.95
NEDD4L-237ENST00000617539 NAA16Q6N069 864 aaPredicted RBP27.24■■□□□ 1.95
NEDD4L-237ENST00000617539 C17orf99Q6UX52 265 aa27.24■■□□□ 1.95
NEDD4L-237ENST00000617539 TEX11Q8IYF3 940 aa27.24■■□□□ 1.95
NEDD4L-237ENST00000617539 PICK1Q9NRD5 415 aa27.24■■□□□ 1.95
NEDD4L-237ENST00000617539 AFG3L2Q9Y4W6 797 aa27.24■■□□□ 1.95
NEDD4L-237ENST00000617539 PDE4DIPQ5VU43 2346 aa27.24■■□□□ 1.95
NEDD4L-237ENST00000617539 CTNND1O60716 968 aaKnown RBP27.23■■□□□ 1.95
NEDD4L-237ENST00000617539 LACTBP83111 547 aaPredicted RBP27.23■■□□□ 1.95
NEDD4L-237ENST00000617539 ARMC5Q96C12 935 aa27.23■■□□□ 1.95
NEDD4L-237ENST00000617539 AATFQ9NY61 560 aaKnown RBP eCLIP27.23■■□□□ 1.95
NEDD4L-237ENST00000617539 A0A0G2JLL6 359 aaPredicted RBP27.22■■□□□ 1.95
NEDD4L-237ENST00000617539 PRRT2Q7Z6L0 340 aaPredicted RBP27.22■■□□□ 1.95
NEDD4L-237ENST00000617539 CCDC84Q86UT8 332 aaPredicted RBP27.22■■□□□ 1.95
NEDD4L-237ENST00000617539 CPA4Q9UI42 421 aa27.22■■□□□ 1.95
NEDD4L-237ENST00000617539 CTGFP29279 349 aa27.21■■□□□ 1.95
NEDD4L-237ENST00000617539 COG6Q9Y2V7 657 aa27.21■■□□□ 1.95
NEDD4L-237ENST00000617539 PTCH2Q9Y6C5 1203 aa27.21■■□□□ 1.95
NEDD4L-237ENST00000617539 NDUFB9Q9Y6M9 179 aa27.21■■□□□ 1.95
NEDD4L-237ENST00000617539 PPP4CP60510 307 aa27.2■■□□□ 1.94
NEDD4L-237ENST00000617539 RRP1BQ14684 758 aaKnown RBP27.2■■□□□ 1.94
NEDD4L-237ENST00000617539 SIRT2Q8IXJ6 389 aa27.2■■□□□ 1.94
NEDD4L-237ENST00000617539 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.2■■□□□ 1.942e-9■■■□□ 18.9
NEDD4L-237ENST00000617539 ZBTB40Q9NUA8 1239 aa27.2■■□□□ 1.94
NEDD4L-237ENST00000617539 POTEFA5A3E0 1075 aa27.19■■□□□ 1.94
NEDD4L-237ENST00000617539 MS4A1P11836 297 aa27.19■■□□□ 1.94
NEDD4L-237ENST00000617539 LOC285556D6RIA3 1793 aa27.19■■□□□ 1.94
NEDD4L-237ENST00000617539 CYP2C8P10632 490 aa27.18■■□□□ 1.94
NEDD4L-237ENST00000617539 ARHGEF6Q15052 776 aa27.18■■□□□ 1.94
NEDD4L-237ENST00000617539 AACSQ86V21 672 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms