RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 GABRQQ9UN88 632 aa10.65□□□□□ -0.7
GPC6-202ENST00000617456 KCNH4Q9UQ05 1017 aa10.65□□□□□ -0.7
GPC6-202ENST00000617456 CUL9Q8IWT3 2517 aa10.65□□□□□ -0.7
GPC6-202ENST00000617456 EVI5O60447 810 aa10.64□□□□□ -0.71
GPC6-202ENST00000617456 PDE8BO95263 885 aa10.64□□□□□ -0.71
GPC6-202ENST00000617456 TFRCP02786 760 aaKnown RBP10.64□□□□□ -0.71
GPC6-202ENST00000617456 IFIT1P09914 478 aaKnown RBP10.64□□□□□ -0.71
GPC6-202ENST00000617456 ELNP15502 786 aa10.64□□□□□ -0.71
GPC6-202ENST00000617456 MOGSQ13724 837 aa10.64□□□□□ -0.71
GPC6-202ENST00000617456 HHIPL2Q6UWX4 724 aa10.64□□□□□ -0.71
GPC6-202ENST00000617456 SLAIN1Q8ND83 568 aa10.64□□□□□ -0.71
GPC6-202ENST00000617456 PRO3102Q9H379 93 aa10.64□□□□□ -0.71
GPC6-202ENST00000617456 ZNF112Q9UJU3 913 aa10.64□□□□□ -0.71
GPC6-202ENST00000617456 RPAP1Q9BWH6 1393 aaPredicted RBP10.64□□□□□ -0.71
GPC6-202ENST00000617456 AK9Q5TCS8 1911 aa10.63□□□□□ -0.71
GPC6-202ENST00000617456 SOX1O00570 391 aaPredicted RBP10.63□□□□□ -0.71
GPC6-202ENST00000617456 ADCY3O60266 1144 aa10.63□□□□□ -0.71
GPC6-202ENST00000617456 INHAP05111 366 aa10.63□□□□□ -0.71
GPC6-202ENST00000617456 NFIAQ12857 509 aa10.63□□□□□ -0.71
GPC6-202ENST00000617456 PUM3Q15397 648 aaKnown RBP10.63□□□□□ -0.71
GPC6-202ENST00000617456 DIXDC1Q155Q3 683 aa10.63□□□□□ -0.71
GPC6-202ENST00000617456 GPAT2Q6NUI2 795 aa10.63□□□□□ -0.71
GPC6-202ENST00000617456 CDC42EP5Q6NZY7 148 aa10.63□□□□□ -0.71
GPC6-202ENST00000617456 GADL1Q6ZQY3 521 aa10.63□□□□□ -0.71
GPC6-202ENST00000617456 ANKRD44Q8N8A2 993 aa10.63□□□□□ -0.71
GPC6-202ENST00000617456 VGLL2Q8N8G2 317 aa10.63□□□□□ -0.71
GPC6-202ENST00000617456 SSH1Q8WYL5 1049 aa10.63□□□□□ -0.71
GPC6-202ENST00000617456 LRCH3Q96II8 777 aa10.63□□□□□ -0.71
GPC6-202ENST00000617456 STAP2Q9UGK3 403 aa10.63□□□□□ -0.71
GPC6-202ENST00000617456 SUGT1Q9Y2Z0 365 aa10.63□□□□□ -0.71
GPC6-202ENST00000617456 DAGLAQ9Y4D2 1042 aa10.63□□□□□ -0.71
GPC6-202ENST00000617456 U3KPZ7 1027 aaPredicted RBP10.63□□□□□ -0.71
GPC6-202ENST00000617456 KIF16BQ96L93 1317 aa10.62□□□□□ -0.71
GPC6-202ENST00000617456 A0A0C4DFX4 3053 aa10.62□□□□□ -0.71
GPC6-202ENST00000617456 CXCL11O14625 94 aa10.62□□□□□ -0.71
GPC6-202ENST00000617456 SGPL1O95470 568 aa10.62□□□□□ -0.71
GPC6-202ENST00000617456 BCRP11274 1271 aa10.62□□□□□ -0.71
GPC6-202ENST00000617456 CDK11BP21127 795 aaKnown RBP10.62□□□□□ -0.71
GPC6-202ENST00000617456 FLT3LGP49771 235 aa10.62□□□□□ -0.71
GPC6-202ENST00000617456 NOL9Q5SY16 702 aaKnown RBP10.62□□□□□ -0.71
GPC6-202ENST00000617456 ZFPM1Q8IX07 1006 aa10.62□□□□□ -0.71
GPC6-202ENST00000617456 WDR66Q8TBY9 1149 aa10.62□□□□□ -0.71
GPC6-202ENST00000617456 ARHGAP45Q92619 1136 aa10.62□□□□□ -0.71
GPC6-202ENST00000617456 DEFB118Q96PH6 123 aa10.62□□□□□ -0.71
GPC6-202ENST00000617456 PICK1Q9NRD5 415 aa10.62□□□□□ -0.71
GPC6-202ENST00000617456 USP40Q9NVE5 1235 aa10.62□□□□□ -0.71
GPC6-202ENST00000617456 FAM198AQ9UFP1 575 aa10.62□□□□□ -0.71
GPC6-202ENST00000617456 SUPT16HQ9Y5B9 1047 aaKnown RBP10.62□□□□□ -0.71
GPC6-202ENST00000617456 TNPO2O14787 897 aaKnown RBP10.61□□□□□ -0.71
GPC6-202ENST00000617456 SLC5A1P13866 664 aa10.61□□□□□ -0.71
GPC6-202ENST00000617456 FGFR2P21802 821 aa10.61□□□□□ -0.71
GPC6-202ENST00000617456 USP44Q9H0E7 712 aa10.61□□□□□ -0.71
GPC6-202ENST00000617456 ZHX2Q9Y6X8 837 aa10.61□□□□□ -0.71
GPC6-202ENST00000617456 LDHBP07195 334 aaKnown RBP10.6□□□□□ -0.71
GPC6-202ENST00000617456 PRDX5P30044 214 aa10.6□□□□□ -0.71
GPC6-202ENST00000617456 FASTKD5Q7L8L6 764 aaKnown RBP10.6□□□□□ -0.71
GPC6-202ENST00000617456 ZSCAN29Q8IWY8 852 aaPredicted RBP10.6□□□□□ -0.71
GPC6-202ENST00000617456 SCYL3Q8IZE3 742 aa10.6□□□□□ -0.71
GPC6-202ENST00000617456 SMCR8Q8TEV9 937 aaPredicted RBP10.6□□□□□ -0.71
GPC6-202ENST00000617456 API5Q9BZZ5 524 aaKnown RBP10.6□□□□□ -0.71
GPC6-202ENST00000617456 A0A0G2JLL6 359 aaPredicted RBP10.59□□□□□ -0.71
GPC6-202ENST00000617456 A0A1W2PPC1 479 aa10.59□□□□□ -0.71
GPC6-202ENST00000617456 TRIM75PA6NK02 468 aa10.59□□□□□ -0.71
GPC6-202ENST00000617456 PHF20L1A8MW92 1017 aa10.59□□□□□ -0.71
GPC6-202ENST00000617456 SLURP2P0DP57 97 aa10.59□□□□□ -0.71
GPC6-202ENST00000617456 PTPRAP18433 802 aa10.59□□□□□ -0.71
GPC6-202ENST00000617456 RGS3P49796 1198 aa10.59□□□□□ -0.71
GPC6-202ENST00000617456 PRRT2Q7Z6L0 340 aaPredicted RBP10.59□□□□□ -0.71
GPC6-202ENST00000617456 CCDC84Q86UT8 332 aaPredicted RBP10.59□□□□□ -0.71
GPC6-202ENST00000617456 C7orf61Q8IZ16 206 aa10.59□□□□□ -0.71
GPC6-202ENST00000617456 ANKRD13CQ8N6S4 541 aa10.59□□□□□ -0.71
GPC6-202ENST00000617456 DIS3LQ8TF46 1054 aaKnown RBP10.59□□□□□ -0.71
GPC6-202ENST00000617456 LPIN2Q92539 896 aa10.59□□□□□ -0.71
GPC6-202ENST00000617456 PAWRQ96IZ0 340 aaKnown RBP10.59□□□□□ -0.71
GPC6-202ENST00000617456 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.59□□□□□ -0.71
GPC6-202ENST00000617456 ZMYND8Q9ULU4 1186 aaPredicted RBP10.59□□□□□ -0.71
GPC6-202ENST00000617456 LRRFIP2Q9Y608 721 aaKnown RBP10.59□□□□□ -0.71
GPC6-202ENST00000617456 COL6A3P12111 3177 aa10.59□□□□□ -0.71
GPC6-202ENST00000617456 LAMA3Q16787 3333 aa10.58□□□□□ -0.72
GPC6-202ENST00000617456 EYA2O00167 538 aa10.58□□□□□ -0.72
GPC6-202ENST00000617456 IRF5Q13568 498 aa10.58□□□□□ -0.72
GPC6-202ENST00000617456 TPRNQ4KMQ1 711 aa10.58□□□□□ -0.72
GPC6-202ENST00000617456 DIEXFQ68CQ4 756 aaKnown RBP10.58□□□□□ -0.72
GPC6-202ENST00000617456 NECAB2Q7Z6G3 386 aa10.58□□□□□ -0.72
GPC6-202ENST00000617456 PXYLP1Q8TE99 480 aa10.58□□□□□ -0.72
GPC6-202ENST00000617456 COA7Q96BR5 231 aa10.58□□□□□ -0.72
GPC6-202ENST00000617456 SMC4Q9NTJ3 1288 aa10.58□□□□□ -0.72
GPC6-202ENST00000617456 AFG3L2Q9Y4W6 797 aa10.58□□□□□ -0.72
GPC6-202ENST00000617456 MGAMO43451 1857 aa10.57□□□□□ -0.72
GPC6-202ENST00000617456 IPO8O15397 1037 aaKnown RBP10.57□□□□□ -0.72
GPC6-202ENST00000617456 CIAO1O76071 339 aa10.57□□□□□ -0.72
GPC6-202ENST00000617456 HMGB1P09429 215 aaKnown RBP10.57□□□□□ -0.72
GPC6-202ENST00000617456 PICALMQ13492 652 aa10.57□□□□□ -0.72
GPC6-202ENST00000617456 ATP2B3Q16720 1220 aa10.57□□□□□ -0.72
GPC6-202ENST00000617456 SH3BP5LQ7L8J4 393 aa10.57□□□□□ -0.72
GPC6-202ENST00000617456 DHX37Q8IY37 1157 aaKnown RBP10.57□□□□□ -0.72
GPC6-202ENST00000617456 CDCA7LQ96GN5 454 aa10.57□□□□□ -0.72
GPC6-202ENST00000617456 NAP1L5Q96NT1 182 aaPredicted RBP10.57□□□□□ -0.72
GPC6-202ENST00000617456 CRISPLD2Q9H0B8 497 aa10.57□□□□□ -0.72
GPC6-202ENST00000617456 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms