RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 CFAP221Q4G0U5 840 aa21.09■□□□□ 0.97
SPAST-203ENST00000615843 SV2BQ7L1I2 683 aa21.09■□□□□ 0.97
SPAST-203ENST00000615843 ANGEL1Q9UNK9 670 aaKnown RBP21.09■□□□□ 0.97
SPAST-203ENST00000615843 KLHL7Q8IXQ5 586 aa21.09■□□□□ 0.97
SPAST-203ENST00000615843 MAGEB6Q8N7X4 407 aa21.09■□□□□ 0.97
SPAST-203ENST00000615843 FAM71BQ8TC56 605 aa21.09■□□□□ 0.97
SPAST-203ENST00000615843 MED4Q9NPJ6 270 aa21.09■□□□□ 0.97
SPAST-203ENST00000615843 B4E1Z4 1266 aa21.09■□□□□ 0.97
SPAST-203ENST00000615843 CIB2O75838 187 aa21.09■□□□□ 0.97
SPAST-203ENST00000615843 SF3B2Q13435 895 aaKnown RBP21.09■□□□□ 0.97
SPAST-203ENST00000615843 HS2ST1Q7LGA3 356 aa21.09■□□□□ 0.97
SPAST-203ENST00000615843 NEDD9Q14511 834 aa21.08■□□□□ 0.97
SPAST-203ENST00000615843 CROCCP2Q86T23 111 aa21.08■□□□□ 0.97
SPAST-203ENST00000615843 PNOCQ13519 176 aa21.08■□□□□ 0.97
SPAST-203ENST00000615843 CEP85LQ5SZL2 805 aa21.08■□□□□ 0.97
SPAST-203ENST00000615843 VSIG1Q86XK7 387 aa21.08■□□□□ 0.97
SPAST-203ENST00000615843 TRIM31Q9BZY9 425 aa21.08■□□□□ 0.97
SPAST-203ENST00000615843 SYNCQ9H7C4 482 aa21.08■□□□□ 0.97
SPAST-203ENST00000615843 DUOX2Q9NRD8 1548 aa21.08■□□□□ 0.96
SPAST-203ENST00000615843 GSTO1P78417 241 aa21.08■□□□□ 0.96
SPAST-203ENST00000615843 TTC6Q86TZ1 520 aa21.08■□□□□ 0.96
SPAST-203ENST00000615843 FMNL3Q8IVF7 1028 aa21.08■□□□□ 0.96
SPAST-203ENST00000615843 NRBP1Q9UHY1 535 aa21.08■□□□□ 0.96
SPAST-203ENST00000615843 FLT4P35916 1363 aa21.08■□□□□ 0.96
SPAST-203ENST00000615843 TNNI3KQ59H18 835 aa21.08■□□□□ 0.96
SPAST-203ENST00000615843 BCAS4Q8TDM0 211 aa21.08■□□□□ 0.96
SPAST-203ENST00000615843 PDE11AQ9HCR9 933 aa21.08■□□□□ 0.96
SPAST-203ENST00000615843 FPGT-TNNI3KV9GXZ4 949 aa21.08■□□□□ 0.96
SPAST-203ENST00000615843 ATP8B1O43520 1251 aa21.07■□□□□ 0.96
SPAST-203ENST00000615843 GNA11P29992 359 aa21.07■□□□□ 0.96
SPAST-203ENST00000615843 DCAF17Q5H9S7 520 aaPredicted RBP21.07■□□□□ 0.96
SPAST-203ENST00000615843 KRT40Q6A162 431 aa21.07■□□□□ 0.96
SPAST-203ENST00000615843 TSKSQ9UJT2 592 aa21.07■□□□□ 0.96
SPAST-203ENST00000615843 TEX14Q8IWB6 1497 aa21.07■□□□□ 0.96
SPAST-203ENST00000615843 RGS12O14924 1447 aa21.07■□□□□ 0.96
SPAST-203ENST00000615843 TNNI2P48788 182 aa21.07■□□□□ 0.96
SPAST-203ENST00000615843 SEPT6Q14141 434 aa21.07■□□□□ 0.96
SPAST-203ENST00000615843 APBB1IPQ7Z5R6 666 aaPredicted RBP21.07■□□□□ 0.96
SPAST-203ENST00000615843 MIGA1Q8NAN2 632 aa21.07■□□□□ 0.96
SPAST-203ENST00000615843 MTMR3Q13615 1198 aa21.07■□□□□ 0.96
SPAST-203ENST00000615843 RRP36Q96EU6 259 aaKnown RBP21.07■□□□□ 0.96
SPAST-203ENST00000615843 PPANQ9NQ55 473 aaKnown RBP21.07■□□□□ 0.96
SPAST-203ENST00000615843 RRP15Q9Y3B9 282 aaKnown RBP21.07■□□□□ 0.96
SPAST-203ENST00000615843 KIF24Q5T7B8 1368 aa21.07■□□□□ 0.96
SPAST-203ENST00000615843 CEP104O60308 925 aa21.07■□□□□ 0.96
SPAST-203ENST00000615843 HLA-DOAP06340 250 aa21.07■□□□□ 0.96
SPAST-203ENST00000615843 ATP2A2P16615 1042 aaKnown RBP21.07■□□□□ 0.96
SPAST-203ENST00000615843 CNNM4Q6P4Q7 775 aa21.07■□□□□ 0.96
SPAST-203ENST00000615843 CAPS2Q9BXY5 557 aa21.07■□□□□ 0.96
SPAST-203ENST00000615843 CD109Q6YHK3 1445 aa21.06■□□□□ 0.96
SPAST-203ENST00000615843 HGSO14964 777 aaPredicted RBP21.06■□□□□ 0.96
SPAST-203ENST00000615843 TAOK1Q7L7X3 1001 aa21.06■□□□□ 0.96
SPAST-203ENST00000615843 SPATS2Q86XZ4 545 aaKnown RBP21.06■□□□□ 0.96
SPAST-203ENST00000615843 TDRD7Q8NHU6 1098 aaKnown RBP21.06■□□□□ 0.96
SPAST-203ENST00000615843 GRIN2AQ12879 1464 aa21.06■□□□□ 0.96
SPAST-203ENST00000615843 SLC9C1Q4G0N8 1177 aa21.06■□□□□ 0.96
SPAST-203ENST00000615843 GOLGA8KD6RF30 607 aa21.06■□□□□ 0.96
SPAST-203ENST00000615843 FYB2Q5VWT5 728 aa21.06■□□□□ 0.96
SPAST-203ENST00000615843 RABGGTAQ92696 567 aa21.06■□□□□ 0.96
SPAST-203ENST00000615843 DBNDD2Q9BQY9 259 aa21.06■□□□□ 0.96
SPAST-203ENST00000615843 BEND3Q5T5X7 828 aa21.06■□□□□ 0.96
SPAST-203ENST00000615843 FAM13AO94988 1023 aa21.05■□□□□ 0.96
SPAST-203ENST00000615843 PFKFB1P16118 471 aa21.05■□□□□ 0.96
SPAST-203ENST00000615843 RPL13P26373 211 aaKnown RBP21.05■□□□□ 0.96
SPAST-203ENST00000615843 CDC25BP30305 580 aa21.05■□□□□ 0.96
SPAST-203ENST00000615843 CHL1O00533 1208 aa21.05■□□□□ 0.96
SPAST-203ENST00000615843 CD2BP2O95400 341 aaKnown RBP21.05■□□□□ 0.96
SPAST-203ENST00000615843 KRT71Q3SY84 523 aa21.05■□□□□ 0.96
SPAST-203ENST00000615843 PPP1R13BQ96KQ4 1090 aa21.05■□□□□ 0.96
SPAST-203ENST00000615843 DDX41Q9UJV9 622 aaKnown RBP21.05■□□□□ 0.96
SPAST-203ENST00000615843 NPATQ14207 1427 aa21.05■□□□□ 0.96
SPAST-203ENST00000615843 ASIC2Q16515 512 aa21.05■□□□□ 0.96
SPAST-203ENST00000615843 USP28Q96RU2 1077 aa21.05■□□□□ 0.96
SPAST-203ENST00000615843 CLGNO14967 610 aa21.05■□□□□ 0.96
SPAST-203ENST00000615843 MYSM1Q5VVJ2 828 aa21.05■□□□□ 0.96
SPAST-203ENST00000615843 ABCC4O15439 1325 aa21.05■□□□□ 0.96
SPAST-203ENST00000615843 CCDC38Q502W7 563 aa21.04■□□□□ 0.96
SPAST-203ENST00000615843 CCDC65Q8IXS2 484 aa21.04■□□□□ 0.96
SPAST-203ENST00000615843 VCXQ9H320 206 aa21.04■□□□□ 0.96
SPAST-203ENST00000615843 ITSN2Q9NZM3 1697 aa21.04■□□□□ 0.96
SPAST-203ENST00000615843 PZPP20742 1482 aa21.04■□□□□ 0.96
SPAST-203ENST00000615843 SEC31AO94979 1220 aaKnown RBP21.04■□□□□ 0.96
SPAST-203ENST00000615843 MIPOL1Q8TD10 442 aa21.04■□□□□ 0.96
SPAST-203ENST00000615843 MICAL1Q8TDZ2 1067 aa21.04■□□□□ 0.96
SPAST-203ENST00000615843 NELFBQ8WX92 580 aa21.04■□□□□ 0.96
SPAST-203ENST00000615843 ANAPC4Q9UJX5 808 aa21.04■□□□□ 0.96
SPAST-203ENST00000615843 NOL3O60936 208 aaKnown RBP21.04■□□□□ 0.96
SPAST-203ENST00000615843 CCDC110Q8TBZ0 833 aa21.04■□□□□ 0.96
SPAST-203ENST00000615843 EYA1Q99502 592 aa21.04■□□□□ 0.96
SPAST-203ENST00000615843 PIK3AP1Q6ZUJ8 805 aa21.03■□□□□ 0.96
SPAST-203ENST00000615843 RPGRQ92834 1020 aaKnown RBP21.03■□□□□ 0.96
SPAST-203ENST00000615843 COMMD10Q9Y6G5 202 aa21.03■□□□□ 0.96
SPAST-203ENST00000615843 GCKP35557 465 aa21.03■□□□□ 0.96
SPAST-203ENST00000615843 TIMM10P62072 90 aa21.03■□□□□ 0.96
SPAST-203ENST00000615843 SPOPO43791 374 aa21.03■□□□□ 0.96
SPAST-203ENST00000615843 MBD4O95243 580 aa21.03■□□□□ 0.96
SPAST-203ENST00000615843 TTC38Q5R3I4 469 aa21.03■□□□□ 0.96
SPAST-203ENST00000615843 SF3A3Q12874 501 aaKnown RBP eCLIP21.03■□□□□ 0.96
SPAST-203ENST00000615843 LETM2Q2VYF4 491 aa21.03■□□□□ 0.96
SPAST-203ENST00000615843 ARHGEF2Q92974 986 aaKnown RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms