RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 KLHL40Q2TBA0 621 aa10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 RILPL1Q5EBL4 403 aa10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 TTLL6Q8N841 843 aa10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 TRIM47Q96LD4 638 aa10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 TM6SF1Q9BZW5 370 aa10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 SSH2Q76I76 1423 aa10.75□□□□□ -0.69
CLTCL1-208ENST00000615606 NRXN1Q9ULB1 1477 aa10.74□□□□□ -0.69
CLTCL1-208ENST00000615606 HSPA4P34932 840 aa10.74□□□□□ -0.69
CLTCL1-208ENST00000615606 TAF4BQ92750 862 aa10.74□□□□□ -0.69
CLTCL1-208ENST00000615606 V9GY48 417 aaPredicted RBP10.74□□□□□ -0.69
CLTCL1-208ENST00000615606 SPATA31A1Q5TZJ5 1347 aa10.74□□□□□ -0.69
CLTCL1-208ENST00000615606 E7EWF7 191 aa10.74□□□□□ -0.69
CLTCL1-208ENST00000615606 AFMP43652 599 aa10.74□□□□□ -0.69
CLTCL1-208ENST00000615606 SETQ01105 290 aaPredicted RBP10.74□□□□□ -0.69
CLTCL1-208ENST00000615606 DNM1Q05193 864 aaKnown RBP10.74□□□□□ -0.69
CLTCL1-208ENST00000615606 TXNRD1Q16881 649 aa10.74□□□□□ -0.69
CLTCL1-208ENST00000615606 TMEM87AQ8NBN3 555 aa10.74□□□□□ -0.69
CLTCL1-208ENST00000615606 DCCP43146 1447 aa10.74□□□□□ -0.69
CLTCL1-208ENST00000615606 ERLIN2O94905 339 aa10.74□□□□□ -0.69
CLTCL1-208ENST00000615606 PCP11498 1178 aaKnown RBP10.74□□□□□ -0.69
CLTCL1-208ENST00000615606 ADORA1P30542 326 aa10.74□□□□□ -0.69
CLTCL1-208ENST00000615606 IRX3P78415 501 aaPredicted RBP10.74□□□□□ -0.69
CLTCL1-208ENST00000615606 CHURC1Q8WUH1 139 aa10.74□□□□□ -0.69
CLTCL1-208ENST00000615606 BSDC1Q9NW68 430 aaPredicted RBP10.74□□□□□ -0.69
CLTCL1-208ENST00000615606 STAP2Q9UGK3 403 aa10.74□□□□□ -0.69
CLTCL1-208ENST00000615606 DBNLQ9UJU6 430 aaKnown RBP10.74□□□□□ -0.69
CLTCL1-208ENST00000615606 SOS2Q07890 1332 aaPredicted RBP10.74□□□□□ -0.69
CLTCL1-208ENST00000615606 YEATS4O95619 227 aa10.74□□□□□ -0.69
CLTCL1-208ENST00000615606 ZNF165P49910 485 aa10.74□□□□□ -0.69
CLTCL1-208ENST00000615606 ATP8A2Q9NTI2 1148 aa10.74□□□□□ -0.69
CLTCL1-208ENST00000615606 BACH1O14867 736 aa10.73□□□□□ -0.69
CLTCL1-208ENST00000615606 NCBP1Q09161 790 aaKnown RBP10.73□□□□□ -0.69
CLTCL1-208ENST00000615606 BRDTQ58F21 947 aaPredicted RBP10.73□□□□□ -0.69
CLTCL1-208ENST00000615606 HSP90B2PQ58FF3 399 aa10.73□□□□□ -0.69
CLTCL1-208ENST00000615606 BARGINQ6ZT62 677 aa10.73□□□□□ -0.69
CLTCL1-208ENST00000615606 TCP10L2B9ZVM9 353 aa10.73□□□□□ -0.69
CLTCL1-208ENST00000615606 PSMA7O14818 248 aa10.73□□□□□ -0.69
CLTCL1-208ENST00000615606 LETM2Q2VYF4 491 aa10.73□□□□□ -0.69
CLTCL1-208ENST00000615606 FCHSD1Q86WN1 690 aa10.73□□□□□ -0.69
CLTCL1-208ENST00000615606 TTLL11Q8NHH1 800 aa10.73□□□□□ -0.69
CLTCL1-208ENST00000615606 CLIP2Q9UDT6 1046 aa10.73□□□□□ -0.69
CLTCL1-208ENST00000615606 CARMIL3Q8ND23 1372 aa10.73□□□□□ -0.69
CLTCL1-208ENST00000615606 HLFQ16534 295 aa10.73□□□□□ -0.69
CLTCL1-208ENST00000615606 JAKMIP3Q5VZ66 844 aa10.73□□□□□ -0.69
CLTCL1-208ENST00000615606 IQCEQ6IPM2 695 aa10.73□□□□□ -0.69
CLTCL1-208ENST00000615606 DHX58Q96C10 678 aa10.73□□□□□ -0.69
CLTCL1-208ENST00000615606 NUP88Q99567 741 aaPredicted RBP10.73□□□□□ -0.69
CLTCL1-208ENST00000615606 BEGAINQ9BUH8 593 aa10.73□□□□□ -0.69
CLTCL1-208ENST00000615606 SSR1P43307 286 aaKnown RBP10.73□□□□□ -0.69
CLTCL1-208ENST00000615606 ADCY7P51828 1080 aa10.73□□□□□ -0.69
CLTCL1-208ENST00000615606 SPAG1Q07617 926 aa10.73□□□□□ -0.69
CLTCL1-208ENST00000615606 BCORL1Q5H9F3 1711 aa10.73□□□□□ -0.69
CLTCL1-208ENST00000615606 A0A0D9SFI3 127 aa10.72□□□□□ -0.69
CLTCL1-208ENST00000615606 FAM13AO94988 1023 aa10.72□□□□□ -0.69
CLTCL1-208ENST00000615606 KRT13P13646 458 aa10.72□□□□□ -0.69
CLTCL1-208ENST00000615606 BIN2Q9UBW5 565 aaPredicted RBP10.72□□□□□ -0.69
CLTCL1-208ENST00000615606 SETD1BQ9UPS6 1966 aaKnown RBP10.72□□□□□ -0.69
CLTCL1-208ENST00000615606 ZSCAN12O43309 604 aa10.72□□□□□ -0.69
CLTCL1-208ENST00000615606 PTPN12Q05209 780 aaKnown RBP10.72□□□□□ -0.69
CLTCL1-208ENST00000615606 GRIPAP1Q4V328 841 aa10.72□□□□□ -0.69
CLTCL1-208ENST00000615606 FAM47AQ5JRC9 791 aa10.72□□□□□ -0.69
CLTCL1-208ENST00000615606 KRT25Q7Z3Z0 450 aa10.72□□□□□ -0.69
CLTCL1-208ENST00000615606 PIM2Q9P1W9 311 aa10.72□□□□□ -0.69
CLTCL1-208ENST00000615606 HSPD1P10809 573 aaKnown RBP10.72□□□□□ -0.69
CLTCL1-208ENST00000615606 PABPC4Q13310 644 aaKnown RBP eCLIP10.72□□□□□ -0.69
CLTCL1-208ENST00000615606 CERKLQ49MI3 558 aaPredicted RBP10.72□□□□□ -0.69
CLTCL1-208ENST00000615606 IQUBQ8NA54 791 aa10.72□□□□□ -0.69
CLTCL1-208ENST00000615606 PNMA2Q9UL42 364 aa10.72□□□□□ -0.69
CLTCL1-208ENST00000615606 STK24Q9Y6E0 443 aa10.72□□□□□ -0.69
CLTCL1-208ENST00000615606 CDHR2Q9BYE9 1310 aa10.72□□□□□ -0.69
CLTCL1-208ENST00000615606 KCNQ2O43526 872 aa10.72□□□□□ -0.69
CLTCL1-208ENST00000615606 DKC1O60832 514 aaKnown RBP eCLIP10.72□□□□□ -0.692e-6■■■■□ 22.2
CLTCL1-208ENST00000615606 SEC24BO95487 1268 aa10.72□□□□□ -0.69
CLTCL1-208ENST00000615606 SYT1P21579 422 aa10.72□□□□□ -0.69
CLTCL1-208ENST00000615606 TDRD12Q587J7 1177 aaKnown RBP10.72□□□□□ -0.69
CLTCL1-208ENST00000615606 FAM177A1Q8N128 213 aaPredicted RBP10.72□□□□□ -0.69
CLTCL1-208ENST00000615606 ARHGEF1Q92888 912 aaKnown RBP10.72□□□□□ -0.69
CLTCL1-208ENST00000615606 COA1Q9GZY4 146 aa10.72□□□□□ -0.69
CLTCL1-208ENST00000615606 SDR42E1Q8WUS8 393 aa10.71□□□□□ -0.69
CLTCL1-208ENST00000615606 CCDC17Q96LX7 622 aa10.71□□□□□ -0.69
CLTCL1-208ENST00000615606 DBNDD1Q9H9R9 158 aa10.71□□□□□ -0.69
CLTCL1-208ENST00000615606 FER1L4A9Z1Z3 1794 aa10.71□□□□□ -0.69
CLTCL1-208ENST00000615606 KIAA1210Q9ULL0 1709 aa10.71□□□□□ -0.69
CLTCL1-208ENST00000615606 NEBLO76041 1014 aa10.71□□□□□ -0.69
CLTCL1-208ENST00000615606 CPXCR1Q8N123 301 aa10.71□□□□□ -0.69
CLTCL1-208ENST00000615606 NONOQ15233 471 aaKnown RBP eCLIP10.71□□□□□ -0.7
CLTCL1-208ENST00000615606 ZSCAN10Q96SZ4 725 aaPredicted RBP10.71□□□□□ -0.7
CLTCL1-208ENST00000615606 GSPT1P15170 499 aaKnown RBP10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 PLCD1P51178 756 aa10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 GSDMDP57764 484 aa10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 ISM2Q6H9L7 571 aa10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 DIS3L2Q8IYB7 885 aaKnown RBP10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 ZNF654Q8IZM8 581 aa10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 SMCR8Q8TEV9 937 aaPredicted RBP10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 TCHPQ9BT92 498 aa10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 OSBPL3Q9H4L5 887 aa10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 NCOA5Q9HCD5 579 aaKnown RBP10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 DACT1Q9NYF0 836 aa10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 SWAP70Q9UH65 585 aa10.7□□□□□ -0.7
CLTCL1-208ENST00000615606 PLEKHG2Q9H7P9 1386 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms