RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 A0A0U1RQJ8 604 aa11.78□□□□□ -0.52
TNFAIP3-208ENST00000615468 ATRIPQ8WXE1 791 aa11.78□□□□□ -0.52
TNFAIP3-208ENST00000615468 SCLT1Q96NL6 688 aa11.78□□□□□ -0.52
TNFAIP3-208ENST00000615468 NAPGQ99747 312 aaPredicted RBP11.78□□□□□ -0.52
TNFAIP3-208ENST00000615468 RAB21Q9UL25 225 aa11.78□□□□□ -0.52
TNFAIP3-208ENST00000615468 PDE6BP35913 854 aa11.78□□□□□ -0.52
TNFAIP3-208ENST00000615468 USP5P45974 858 aa11.78□□□□□ -0.52
TNFAIP3-208ENST00000615468 CCDC129Q6ZRS4 1044 aa11.78□□□□□ -0.52
TNFAIP3-208ENST00000615468 GSPT2Q8IYD1 628 aaKnown RBP11.78□□□□□ -0.52
TNFAIP3-208ENST00000615468 NSUN7Q8NE18 718 aaKnown RBP11.78□□□□□ -0.52
TNFAIP3-208ENST00000615468 IP6K1Q92551 441 aa11.78□□□□□ -0.52
TNFAIP3-208ENST00000615468 C8orf76Q96K31 380 aa11.78□□□□□ -0.52
TNFAIP3-208ENST00000615468 OVOS2A0A0J9YW53 1432 aa11.77□□□□□ -0.52
TNFAIP3-208ENST00000615468 OVOS2Q6IE36 1432 aa11.77□□□□□ -0.52
TNFAIP3-208ENST00000615468 USP32Q8NFA0 1604 aa11.77□□□□□ -0.52
TNFAIP3-208ENST00000615468 CPLX1O14810 134 aa11.77□□□□□ -0.52
TNFAIP3-208ENST00000615468 TICAM2Q86XR7 235 aa11.77□□□□□ -0.52
TNFAIP3-208ENST00000615468 KIRREL3Q8IZU9 778 aa11.77□□□□□ -0.52
TNFAIP3-208ENST00000615468 KCNH5Q8NCM2 988 aa11.77□□□□□ -0.52
TNFAIP3-208ENST00000615468 MSANTD4Q8NCY6 345 aa11.77□□□□□ -0.52
TNFAIP3-208ENST00000615468 NFE2L3Q9Y4A8 694 aa11.77□□□□□ -0.52
TNFAIP3-208ENST00000615468 TMEM94Q12767 1356 aa11.77□□□□□ -0.52
TNFAIP3-208ENST00000615468 GOLGA6BA6NDN3 693 aa11.77□□□□□ -0.53
TNFAIP3-208ENST00000615468 BTBD11A6QL63 1104 aa11.77□□□□□ -0.53
TNFAIP3-208ENST00000615468 AKR1B15C9JRZ8 316 aaPredicted RBP11.77□□□□□ -0.53
TNFAIP3-208ENST00000615468 KLHL10Q6JEL2 608 aa11.77□□□□□ -0.53
TNFAIP3-208ENST00000615468 POLD4Q9HCU8 107 aa11.77□□□□□ -0.53
TNFAIP3-208ENST00000615468 DIP2AQ14689 1571 aa11.77□□□□□ -0.53
TNFAIP3-208ENST00000615468 CHUKO15111 745 aa11.77□□□□□ -0.53
TNFAIP3-208ENST00000615468 CEP85LQ5SZL2 805 aa11.77□□□□□ -0.53
TNFAIP3-208ENST00000615468 ATL3Q6DD88 541 aa11.77□□□□□ -0.53
TNFAIP3-208ENST00000615468 TC2NQ8N9U0 490 aa11.77□□□□□ -0.53
TNFAIP3-208ENST00000615468 CEP170BQ9Y4F5 1589 aaPredicted RBP11.77□□□□□ -0.53
TNFAIP3-208ENST00000615468 TUBBP07437 444 aa11.76□□□□□ -0.53
TNFAIP3-208ENST00000615468 TUBB4BP68371 445 aa11.76□□□□□ -0.53
TNFAIP3-208ENST00000615468 E2F5Q15329 346 aa11.76□□□□□ -0.53
TNFAIP3-208ENST00000615468 LINC00301Q8NCQ3 95 aa11.76□□□□□ -0.53
TNFAIP3-208ENST00000615468 NDUFB9Q9Y6M9 179 aa11.76□□□□□ -0.53
TNFAIP3-208ENST00000615468 GBP2P32456 591 aaPredicted RBP11.76□□□□□ -0.53
TNFAIP3-208ENST00000615468 TRDNQ13061 729 aa11.76□□□□□ -0.53
TNFAIP3-208ENST00000615468 MIEF2Q96C03 454 aa11.76□□□□□ -0.53
TNFAIP3-208ENST00000615468 GUCA1BQ9UMX6 200 aa11.76□□□□□ -0.53
TNFAIP3-208ENST00000615468 A0A1W2PQ27 194 aa11.76□□□□□ -0.53
TNFAIP3-208ENST00000615468 A0A1W2PQ64 194 aa11.76□□□□□ -0.53
TNFAIP3-208ENST00000615468 A0A1W2PQD8 194 aa11.76□□□□□ -0.53
TNFAIP3-208ENST00000615468 ATP2C2O75185 946 aa11.76□□□□□ -0.53
TNFAIP3-208ENST00000615468 RPSAP08865 295 aaKnown RBP11.76□□□□□ -0.53
TNFAIP3-208ENST00000615468 ATP1A2P50993 1020 aa11.76□□□□□ -0.53
TNFAIP3-208ENST00000615468 KCNB2Q92953 911 aa11.76□□□□□ -0.53
TNFAIP3-208ENST00000615468 SGSM3Q96HU1 749 aa11.76□□□□□ -0.53
TNFAIP3-208ENST00000615468 PI4KAP2A4QPH2 592 aa11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 SYF2O95926 243 aaKnown RBP11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 MYL6BP14649 208 aa11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 PEX19P40855 299 aa11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 MAP2K1Q02750 393 aaPredicted RBP11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 B4GALNT4Q76KP1 1039 aa11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 IQCA1Q86XH1 822 aa11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 TMEM139Q8IV31 216 aa11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 FMNL3Q8IVF7 1028 aa11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 PI4KAP1Q8N8J0 262 aa11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 RTEL1Q9NZ71 1219 aa11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 IGSF1Q8N6C5 1336 aa11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 CCDC189A1A4V9 331 aa11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 ENC1O14682 589 aa11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 ZNF827Q17R98 1081 aa11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 ANKRD18AQ8IVF6 992 aa11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 ACRBPQ8NEB7 543 aa11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 TRIM6Q9C030 488 aaPredicted RBP11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 GJB4Q9NTQ9 266 aa11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 CDHR2Q9BYE9 1310 aa11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 ADGRL3Q9HAR2 1447 aa11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 ARHGAP23Q9P227 1491 aa11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 A0A1B0GUA9 196 aa11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 PRAMEF22A3QJZ6 481 aa11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 GPTP24298 496 aa11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 PPFIA1Q13136 1202 aa11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 CCDC70Q6NSX1 233 aa11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 PRDM11Q9NQV5 511 aa11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 MYO6Q9UM54 1294 aa11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 ADGRG1Q9Y653 693 aa11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 MAP3K5Q99683 1374 aa11.75□□□□□ -0.53
TNFAIP3-208ENST00000615468 PES1O00541 588 aaKnown RBP11.74□□□□□ -0.53
TNFAIP3-208ENST00000615468 EZRP15311 586 aaKnown RBP11.74□□□□□ -0.53
TNFAIP3-208ENST00000615468 POLA2Q14181 598 aa11.74□□□□□ -0.53
TNFAIP3-208ENST00000615468 WHAMMP3Q1A5X7 153 aa11.74□□□□□ -0.53
TNFAIP3-208ENST00000615468 SAMD1Q6SPF0 538 aaPredicted RBP11.74□□□□□ -0.53
TNFAIP3-208ENST00000615468 NOC3LQ8WTT2 800 aaKnown RBP11.74□□□□□ -0.53
TNFAIP3-208ENST00000615468 CCDC114Q96M63 670 aa11.74□□□□□ -0.53
TNFAIP3-208ENST00000615468 LLPHQ9BRT6 129 aaKnown RBP11.74□□□□□ -0.53
TNFAIP3-208ENST00000615468 HPCAL4Q9UM19 191 aa11.74□□□□□ -0.53
TNFAIP3-208ENST00000615468 PFKFB2O60825 505 aa11.74□□□□□ -0.53
TNFAIP3-208ENST00000615468 MCM3P25205 808 aa11.74□□□□□ -0.53
TNFAIP3-208ENST00000615468 GCKP35557 465 aa11.74□□□□□ -0.53
TNFAIP3-208ENST00000615468 PDCLQ13371 301 aa11.74□□□□□ -0.53
TNFAIP3-208ENST00000615468 CCDC102BQ68D86 513 aa11.74□□□□□ -0.53
TNFAIP3-208ENST00000615468 FAM43BQ6ZT52 329 aaPredicted RBP11.74□□□□□ -0.53
TNFAIP3-208ENST00000615468 KIF20BQ96Q89 1820 aa11.74□□□□□ -0.53
TNFAIP3-208ENST00000615468 SKAP2O75563 359 aaPredicted RBP11.74□□□□□ -0.53
TNFAIP3-208ENST00000615468 TMED8Q6PL24 325 aaPredicted RBP11.74□□□□□ -0.53
TNFAIP3-208ENST00000615468 RAD9BQ6WBX8 426 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms