RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 EVX2Q03828 476 aa22.96■■□□□ 1.27
SMARCD2-212ENST00000613943 CLEC4GQ6UXB4 293 aa22.96■■□□□ 1.27
SMARCD2-212ENST00000613943 PNPLA7Q6ZV29 1317 aa22.96■■□□□ 1.27
SMARCD2-212ENST00000613943 CDKL5O76039 1030 aa22.96■■□□□ 1.27
SMARCD2-212ENST00000613943 YEATS4O95619 227 aa22.96■■□□□ 1.27
SMARCD2-212ENST00000613943 PPARAQ07869 468 aa22.96■■□□□ 1.27
SMARCD2-212ENST00000613943 PLA2G4DQ86XP0 818 aa22.96■■□□□ 1.27
SMARCD2-212ENST00000613943 ZNF384Q8TF68 577 aa22.96■■□□□ 1.27
SMARCD2-212ENST00000613943 STAG1Q8WVM7 1258 aa22.96■■□□□ 1.27
SMARCD2-212ENST00000613943 BIN1O00499 593 aa22.95■■□□□ 1.26
SMARCD2-212ENST00000613943 CTAGE5O15320 804 aa22.95■■□□□ 1.26
SMARCD2-212ENST00000613943 AXDND1Q5T1B0 1012 aaPredicted RBP22.95■■□□□ 1.26
SMARCD2-212ENST00000613943 CPLX2Q6PUV4 134 aaKnown RBP22.95■■□□□ 1.26
SMARCD2-212ENST00000613943 NUP133Q8WUM0 1156 aa22.95■■□□□ 1.26
SMARCD2-212ENST00000613943 ZNF804BA4D1E1 1349 aa22.95■■□□□ 1.26
SMARCD2-212ENST00000613943 EP400Q96L91 3159 aa22.95■■□□□ 1.26
SMARCD2-212ENST00000613943 LIFRP42702 1097 aa22.94■■□□□ 1.26
SMARCD2-212ENST00000613943 FAM84BQ96KN1 310 aaPredicted RBP22.94■■□□□ 1.26
SMARCD2-212ENST00000613943 KRT23Q9C075 422 aa22.94■■□□□ 1.26
SMARCD2-212ENST00000613943 BSDC1Q9NW68 430 aaPredicted RBP22.94■■□□□ 1.26
SMARCD2-212ENST00000613943 TFCP2L1Q9NZI6 479 aa22.94■■□□□ 1.26
SMARCD2-212ENST00000613943 KCNJ14Q9UNX9 436 aa22.94■■□□□ 1.26
SMARCD2-212ENST00000613943 UQCRHLA0A096LP55 91 aa22.94■■□□□ 1.26
SMARCD2-212ENST00000613943 MAGEB6P1A0A0J9YX57 407 aa22.94■■□□□ 1.26
SMARCD2-212ENST00000613943 GOLGA6L19H0YKK7 550 aa22.94■■□□□ 1.26
SMARCD2-212ENST00000613943 PRDM1O75626 825 aa22.94■■□□□ 1.26
SMARCD2-212ENST00000613943 UQCRHP07919 91 aa22.94■■□□□ 1.26
SMARCD2-212ENST00000613943 WTAPQ15007 396 aa22.94■■□□□ 1.26
SMARCD2-212ENST00000613943 SF3B3Q15393 1217 aaKnown RBP22.94■■□□□ 1.26
SMARCD2-212ENST00000613943 ISM2Q6H9L7 571 aa22.94■■□□□ 1.26
SMARCD2-212ENST00000613943 DHX40Q8IX18 779 aaKnown RBP22.94■■□□□ 1.26
SMARCD2-212ENST00000613943 A0A1W2PQ27 194 aa22.93■■□□□ 1.26
SMARCD2-212ENST00000613943 A0A1W2PQ64 194 aa22.93■■□□□ 1.26
SMARCD2-212ENST00000613943 A0A1W2PQD8 194 aa22.93■■□□□ 1.26
SMARCD2-212ENST00000613943 GNPATO15228 680 aa22.93■■□□□ 1.26
SMARCD2-212ENST00000613943 TPM2P07951 284 aa22.93■■□□□ 1.26
SMARCD2-212ENST00000613943 PFKFB1P16118 471 aa22.93■■□□□ 1.26
SMARCD2-212ENST00000613943 CLIC6Q96NY7 704 aa22.93■■□□□ 1.26
SMARCD2-212ENST00000613943 CNNM2Q9H8M5 875 aa22.93■■□□□ 1.26
SMARCD2-212ENST00000613943 GNAT2P19087 354 aa22.93■■□□□ 1.26
SMARCD2-212ENST00000613943 ZNF202O95125 648 aa22.92■■□□□ 1.26
SMARCD2-212ENST00000613943 SSRP1Q08945 709 aaKnown RBP22.92■■□□□ 1.26
SMARCD2-212ENST00000613943 DPCR1Q3MIW9 517 aa22.92■■□□□ 1.26
SMARCD2-212ENST00000613943 CCDC144BQ3MJ40 725 aa22.92■■□□□ 1.26
SMARCD2-212ENST00000613943 AOPEPQ8N6M6 819 aa22.92■■□□□ 1.26
SMARCD2-212ENST00000613943 CICQ96RK0 1608 aaPredicted RBP22.92■■□□□ 1.26
SMARCD2-212ENST00000613943 COL5A3P25940 1745 aaPredicted RBP22.92■■□□□ 1.26
SMARCD2-212ENST00000613943 BECN2A8MW95 431 aa22.92■■□□□ 1.26
SMARCD2-212ENST00000613943 GOLGA6L6A8MZA4 724 aa22.92■■□□□ 1.26
SMARCD2-212ENST00000613943 CAVIN4Q5BKX8 364 aa22.92■■□□□ 1.26
SMARCD2-212ENST00000613943 KIAA1524Q8TCG1 905 aa22.92■■□□□ 1.26
SMARCD2-212ENST00000613943 RIOK1Q9BRS2 568 aaKnown RBP22.92■■□□□ 1.26
SMARCD2-212ENST00000613943 CLIP2Q9UDT6 1046 aa22.92■■□□□ 1.26
SMARCD2-212ENST00000613943 SLC39A14Q15043 492 aa22.91■■□□□ 1.26
SMARCD2-212ENST00000613943 BTBD18B2RXH4 712 aa22.91■■□□□ 1.26
SMARCD2-212ENST00000613943 TRIM29Q14134 588 aa22.91■■□□□ 1.26
SMARCD2-212ENST00000613943 UBE4AQ14139 1066 aa22.91■■□□□ 1.26
SMARCD2-212ENST00000613943 RTN1Q16799 776 aa22.91■■□□□ 1.26
SMARCD2-212ENST00000613943 SLC4A8Q2Y0W8 1093 aa22.91■■□□□ 1.26
SMARCD2-212ENST00000613943 NBPF5PQ86XG9 351 aaPredicted RBP22.91■■□□□ 1.26
SMARCD2-212ENST00000613943 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.91■■□□□ 1.26
SMARCD2-212ENST00000613943 GNL3LQ9NVN8 582 aaKnown RBP22.91■■□□□ 1.26
SMARCD2-212ENST00000613943 ANO10Q9NW15 660 aa22.91■■□□□ 1.26
SMARCD2-212ENST00000613943 hCG_1642624A0A1W2PR95 340 aa22.9■■□□□ 1.26
SMARCD2-212ENST00000613943 RBM10P98175 930 aaKnown RBP22.9■■□□□ 1.26
SMARCD2-212ENST00000613943 ARID5BQ14865 1188 aa22.9■■□□□ 1.26
SMARCD2-212ENST00000613943 SPECC1Q5M775 1068 aa22.9■■□□□ 1.26
SMARCD2-212ENST00000613943 MAP3K14Q99558 947 aa22.9■■□□□ 1.26
SMARCD2-212ENST00000613943 FMNL1O95466 1100 aaPredicted RBP22.9■■□□□ 1.26
SMARCD2-212ENST00000613943 PTPAQ15257 358 aa22.9■■□□□ 1.26
SMARCD2-212ENST00000613943 SHC4Q6S5L8 630 aa22.9■■□□□ 1.26
SMARCD2-212ENST00000613943 KIAA1468Q9P260 1216 aa22.9■■□□□ 1.26
SMARCD2-212ENST00000613943 LAMB2P55268 1798 aa22.89■■□□□ 1.26
SMARCD2-212ENST00000613943 BCORQ6W2J9 1755 aa22.89■■□□□ 1.26
SMARCD2-212ENST00000613943 ERICH2A1L162 156 aa22.89■■□□□ 1.25
SMARCD2-212ENST00000613943 CHAF1AQ13111 956 aaPredicted RBP22.89■■□□□ 1.25
SMARCD2-212ENST00000613943 SART3Q15020 963 aaKnown RBP22.89■■□□□ 1.25
SMARCD2-212ENST00000613943 SETDB2Q96T68 719 aa22.89■■□□□ 1.25
SMARCD2-212ENST00000613943 UBAC1Q9BSL1 405 aa22.89■■□□□ 1.25
SMARCD2-212ENST00000613943 TNKSO95271 1327 aa22.89■■□□□ 1.25
SMARCD2-212ENST00000613943 TOM1O60784 492 aa22.88■■□□□ 1.25
SMARCD2-212ENST00000613943 IFNAR1P17181 557 aa22.88■■□□□ 1.25
SMARCD2-212ENST00000613943 TXNRD3Q86VQ6 643 aa22.88■■□□□ 1.25
SMARCD2-212ENST00000613943 ZNF654Q8IZM8 581 aa22.88■■□□□ 1.25
SMARCD2-212ENST00000613943 CHD4Q14839 1912 aa22.88■■□□□ 1.25
SMARCD2-212ENST00000613943 ECM29Q5VYK3 1845 aa22.88■■□□□ 1.25
SMARCD2-212ENST00000613943 U2AF2P26368 475 aaKnown RBP eCLIP22.88■■□□□ 1.25
SMARCD2-212ENST00000613943 RPS8P62241 208 aaKnown RBP22.88■■□□□ 1.25
SMARCD2-212ENST00000613943 NR5A1Q13285 461 aa22.88■■□□□ 1.25
SMARCD2-212ENST00000613943 SPTLC3Q9NUV7 552 aa22.88■■□□□ 1.25
SMARCD2-212ENST00000613943 TIAM2Q8IVF5 1701 aa22.88■■□□□ 1.25
SMARCD2-212ENST00000613943 CNTNAP4Q9C0A0 1308 aa22.88■■□□□ 1.25
SMARCD2-212ENST00000613943 CMA1P23946 247 aa22.87■■□□□ 1.25
SMARCD2-212ENST00000613943 PRDX5P30044 214 aa22.87■■□□□ 1.25
SMARCD2-212ENST00000613943 NBPF11Q86T75 865 aa22.87■■□□□ 1.25
SMARCD2-212ENST00000613943 CEP57L1Q8IYX8 460 aa22.87■■□□□ 1.25
SMARCD2-212ENST00000613943 AATFQ9NY61 560 aaKnown RBP eCLIP22.87■■□□□ 1.25
SMARCD2-212ENST00000613943 SLC3A2P08195 630 aaKnown RBP22.87■■□□□ 1.25
SMARCD2-212ENST00000613943 VPS72Q15906 364 aa22.87■■□□□ 1.25
SMARCD2-212ENST00000613943 DIS3L2Q8IYB7 885 aaKnown RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms