RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 TCP11L2Q8N4U5 519 aa5.52□□□□□ -1.53
VPS13D-213ENST00000613099 HIC2Q96JB3 615 aa5.52□□□□□ -1.53
VPS13D-213ENST00000613099 KIAA0556O60303 1618 aa5.52□□□□□ -1.53
VPS13D-213ENST00000613099 ESRRGP62508 458 aa5.52□□□□□ -1.53
VPS13D-213ENST00000613099 TRPC3Q13507 836 aa5.52□□□□□ -1.53
VPS13D-213ENST00000613099 PAPOLAP51003 745 aaKnown RBP5.52□□□□□ -1.53
VPS13D-213ENST00000613099 RTL1A6NKG5 1358 aa5.52□□□□□ -1.53
VPS13D-213ENST00000613099 CLUL1Q15846 466 aa5.52□□□□□ -1.53
VPS13D-213ENST00000613099 PPP2R5EQ16537 467 aa5.52□□□□□ -1.53
VPS13D-213ENST00000613099 AMOTL1Q8IY63 956 aa5.52□□□□□ -1.53
VPS13D-213ENST00000613099 CUL5Q93034 780 aa5.52□□□□□ -1.53
VPS13D-213ENST00000613099 FAM192AQ9GZU8 254 aa5.52□□□□□ -1.53
VPS13D-213ENST00000613099 NRDE2Q9H7Z3 1164 aa5.52□□□□□ -1.53
VPS13D-213ENST00000613099 UBAP1Q9NZ09 502 aa5.52□□□□□ -1.53
VPS13D-213ENST00000613099 CCDC62Q6P9F0 684 aa5.52□□□□□ -1.53
VPS13D-213ENST00000613099 SND1Q7KZF4 910 aaKnown RBP eCLIP5.52□□□□□ -1.53
VPS13D-213ENST00000613099 CCDC51Q96ER9 411 aa5.52□□□□□ -1.53
VPS13D-213ENST00000613099 PTPRGP23470 1445 aa5.52□□□□□ -1.53
VPS13D-213ENST00000613099 CEP170Q5SW79 1584 aa5.52□□□□□ -1.53
VPS13D-213ENST00000613099 TRIM14Q14142 442 aa5.52□□□□□ -1.53
VPS13D-213ENST00000613099 ARHGEF11O15085 1522 aa5.52□□□□□ -1.53
VPS13D-213ENST00000613099 USP26Q9BXU7 913 aa5.52□□□□□ -1.53
VPS13D-213ENST00000613099 TSC22D4Q9Y3Q8 395 aa5.52□□□□□ -1.53
VPS13D-213ENST00000613099 ATP2A2P16615 1042 aaKnown RBP5.52□□□□□ -1.53
VPS13D-213ENST00000613099 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.52□□□□□ -1.53
VPS13D-213ENST00000613099 WDR75Q8IWA0 830 aaKnown RBP5.52□□□□□ -1.53
VPS13D-213ENST00000613099 CCDC13Q8IYE1 715 aa5.52□□□□□ -1.53
VPS13D-213ENST00000613099 THUMPD2Q9BTF0 503 aaKnown RBP5.52□□□□□ -1.53
VPS13D-213ENST00000613099 RNASELQ05823 741 aaKnown RBP5.52□□□□□ -1.53
VPS13D-213ENST00000613099 CC2D1AQ6P1N0 951 aaPredicted RBP5.52□□□□□ -1.53
VPS13D-213ENST00000613099 ZNF710Q8N1W2 664 aa5.52□□□□□ -1.53
VPS13D-213ENST00000613099 GPT2Q8TD30 523 aa5.52□□□□□ -1.53
VPS13D-213ENST00000613099 TCERG1LQ5VWI1 586 aa5.52□□□□□ -1.53
VPS13D-213ENST00000613099 TRIM74Q86UV6 250 aa5.52□□□□□ -1.53
VPS13D-213ENST00000613099 TRIM73Q86UV7 250 aa5.52□□□□□ -1.53
VPS13D-213ENST00000613099 BICC1Q9H694 974 aaKnown RBP5.52□□□□□ -1.53
VPS13D-213ENST00000613099 NEO1Q92859 1461 aa5.52□□□□□ -1.53
VPS13D-213ENST00000613099 RAB11FIP3O75154 756 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 PODNQ7Z5L7 613 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 VIPAS39Q9H9C1 493 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 CDC23Q9UJX2 597 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 CCDC93Q567U6 631 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 SRGAP1Q7Z6B7 1085 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 ENAHQ8N8S7 591 aaPredicted RBP5.51□□□□□ -1.53
VPS13D-213ENST00000613099 OSBPL1AQ9BXW6 950 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 MRPS35P82673 323 aaKnown RBP5.51□□□□□ -1.53
VPS13D-213ENST00000613099 ACTN3Q08043 901 aaPredicted RBP5.51□□□□□ -1.53
VPS13D-213ENST00000613099 ALDH1L2Q3SY69 923 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 AOPEPQ8N6M6 819 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 KIF1BPQ96EK5 621 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 GSTTP1A0A1W2PQM5 241 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 MPP4Q96JB8 637 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 PDP2Q9P2J9 529 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 TROQ12816 1431 aaPredicted RBP5.51□□□□□ -1.53
VPS13D-213ENST00000613099 PSMC1P62191 440 aaKnown RBP5.51□□□□□ -1.53
VPS13D-213ENST00000613099 C16orf87Q6PH81 154 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 PPP1R13BQ96KQ4 1090 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 ANGPTL2Q9UKU9 493 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 GUCA1BQ9UMX6 200 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 PCDHB15Q9Y5E8 787 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 ERICH2A1L162 156 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 NUTM2DQ5VT03 806 aaPredicted RBP5.51□□□□□ -1.53
VPS13D-213ENST00000613099 NUTM2AQ8IVF1 878 aaPredicted RBP5.51□□□□□ -1.53
VPS13D-213ENST00000613099 TMEM57Q8N5G2 664 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 ARHGEF2Q92974 986 aaKnown RBP5.51□□□□□ -1.53
VPS13D-213ENST00000613099 ASXL2Q76L83 1435 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 ELL2O00472 640 aaPredicted RBP5.51□□□□□ -1.53
VPS13D-213ENST00000613099 PSME1Q06323 249 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 CPLX3Q8WVH0 158 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 POLE3Q9NRF9 147 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 DHX9Q08211 1270 aaKnown RBP5.51□□□□□ -1.53
VPS13D-213ENST00000613099 NUGGCQ68CJ6 796 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 TRIM22Q8IYM9 498 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 TUBA3CQ13748 450 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 PROCA1Q8NCQ7 364 aaPredicted RBP5.51□□□□□ -1.53
VPS13D-213ENST00000613099 ARHGEF40Q8TER5 1519 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 ZNF644Q9H582 1327 aaPredicted RBP5.51□□□□□ -1.53
VPS13D-213ENST00000613099 CCDC144CPQ8IYA2 1237 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 TRIML1Q8N9V2 468 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 LAMC1P11047 1609 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 KBTBD12Q3ZCT8 623 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 OLFML1Q6UWY5 402 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 STK38LQ9Y2H1 464 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 TARSL2A2RTX5 802 aaKnown RBP5.51□□□□□ -1.53
VPS13D-213ENST00000613099 GJB2P29033 226 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 NMIQ13287 307 aaPredicted RBP5.51□□□□□ -1.53
VPS13D-213ENST00000613099 CFAP221Q4G0U5 840 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 TTC22Q5TAA0 569 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 SPDYE1Q8NFV5 336 aaPredicted RBP5.51□□□□□ -1.53
VPS13D-213ENST00000613099 STOML1Q9UBI4 398 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 PRG4Q92954 1404 aaPredicted RBP5.51□□□□□ -1.53
VPS13D-213ENST00000613099 C6orf118Q5T5N4 469 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 SPTY2D1Q68D10 685 aaPredicted RBP5.51□□□□□ -1.53
VPS13D-213ENST00000613099 PARVBQ9HBI1 364 aa5.51□□□□□ -1.53
VPS13D-213ENST00000613099 MTRF1LQ9UGC7 380 aaKnown RBP5.51□□□□□ -1.53
VPS13D-213ENST00000613099 MEFVO15553 781 aaPredicted RBP5.5□□□□□ -1.53
VPS13D-213ENST00000613099 MGEA5O60502 916 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 NUF2Q9BZD4 464 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 SH2D4AQ9H788 454 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 VIL1P09327 827 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms