RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 TOB2Q14106 344 aaPredicted RBP23.21■■□□□ 1.31
SRRM3-205ENST00000612155 CFAP100Q494V2 611 aa23.21■■□□□ 1.31
SRRM3-205ENST00000612155 OGFOD1Q8N543 542 aa23.21■■□□□ 1.31
SRRM3-205ENST00000612155 HELLSQ9NRZ9 838 aa23.21■■□□□ 1.31
SRRM3-205ENST00000612155 MAGEB6P1A0A0J9YX57 407 aa23.2■■□□□ 1.3
SRRM3-205ENST00000612155 CYP21A2P08686 494 aa23.2■■□□□ 1.3
SRRM3-205ENST00000612155 PSMA5P28066 241 aa23.2■■□□□ 1.3
SRRM3-205ENST00000612155 TBC1D10BQ4KMP7 808 aaPredicted RBP23.2■■□□□ 1.3
SRRM3-205ENST00000612155 BLOC1S2Q6QNY1 142 aa23.2■■□□□ 1.3
SRRM3-205ENST00000612155 GPT2Q8TD30 523 aa23.2■■□□□ 1.3
SRRM3-205ENST00000612155 RIOK1Q9BRS2 568 aaKnown RBP23.2■■□□□ 1.3
SRRM3-205ENST00000612155 SCAF8Q9UPN6 1271 aaKnown RBP23.2■■□□□ 1.3
SRRM3-205ENST00000612155 CACNB3P54284 484 aa23.2■■□□□ 1.3
SRRM3-205ENST00000612155 GSTO1P78417 241 aa23.2■■□□□ 1.3
SRRM3-205ENST00000612155 SH3RF3Q8TEJ3 882 aaPredicted RBP23.2■■□□□ 1.3
SRRM3-205ENST00000612155 PRMT6Q96LA8 375 aaPredicted RBP23.2■■□□□ 1.3
SRRM3-205ENST00000612155 APOBEC3HQ6NTF7 200 aaKnown RBP23.19■■□□□ 1.3
SRRM3-205ENST00000612155 STOX1Q6ZVD7 989 aa23.19■■□□□ 1.3
SRRM3-205ENST00000612155 ZSCAN31Q96LW9 406 aaPredicted RBP23.19■■□□□ 1.3
SRRM3-205ENST00000612155 ALDH8A1Q9H2A2 487 aaPredicted RBP23.19■■□□□ 1.3
SRRM3-205ENST00000612155 U3KPZ7 1027 aaPredicted RBP23.19■■□□□ 1.3
SRRM3-205ENST00000612155 LAMA4Q16363 1823 aa23.19■■□□□ 1.3
SRRM3-205ENST00000612155 DPY19L2Q6NUT2 758 aa23.18■■□□□ 1.3
SRRM3-205ENST00000612155 SDR42E1Q8WUS8 393 aa23.18■■□□□ 1.3
SRRM3-205ENST00000612155 GAKO14976 1311 aa23.18■■□□□ 1.3
SRRM3-205ENST00000612155 MYOZ2Q9NPC6 264 aa23.18■■□□□ 1.3
SRRM3-205ENST00000612155 SH2B1Q9NRF2 756 aaPredicted RBP23.18■■□□□ 1.3
SRRM3-205ENST00000612155 HDAC9Q9UKV0 1011 aa23.18■■□□□ 1.3
SRRM3-205ENST00000612155 LDHCP07864 332 aa23.17■■□□□ 1.3
SRRM3-205ENST00000612155 SYT1P21579 422 aa23.17■■□□□ 1.3
SRRM3-205ENST00000612155 RPS12P25398 132 aaKnown RBP23.17■■□□□ 1.3
SRRM3-205ENST00000612155 NBPF9Q3BBW0 867 aa23.17■■□□□ 1.3
SRRM3-205ENST00000612155 L1TD1Q5T7N2 865 aaKnown RBP23.17■■□□□ 1.3
SRRM3-205ENST00000612155 TICAM2Q86XR7 235 aa23.17■■□□□ 1.3
SRRM3-205ENST00000612155 ZNF526Q8TF50 670 aaPredicted RBP23.17■■□□□ 1.3
SRRM3-205ENST00000612155 STRBPQ96SI9 672 aaKnown RBP23.17■■□□□ 1.3
SRRM3-205ENST00000612155 TDRD3Q9H7E2 651 aaKnown RBP23.17■■□□□ 1.3
SRRM3-205ENST00000612155 GPRC5DQ9NZD1 345 aa23.17■■□□□ 1.3
SRRM3-205ENST00000612155 SERPINA10Q9UK55 444 aa23.17■■□□□ 1.3
SRRM3-205ENST00000612155 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.17■■□□□ 1.3
SRRM3-205ENST00000612155 ASTN2O75129 1339 aaPredicted RBP23.17■■□□□ 1.3
SRRM3-205ENST00000612155 WDR33Q9C0J8 1336 aaKnown RBP23.17■■□□□ 1.3
SRRM3-205ENST00000612155 GPR75-ASB3A0A0A6YYF3 556 aa23.17■■□□□ 1.3
SRRM3-205ENST00000612155 FOXP2O15409 715 aa23.17■■□□□ 1.3
SRRM3-205ENST00000612155 SLC4A8Q2Y0W8 1093 aa23.17■■□□□ 1.3
SRRM3-205ENST00000612155 FOXD4L6Q3SYB3 417 aaPredicted RBP23.17■■□□□ 1.3
SRRM3-205ENST00000612155 HHIPL2Q6UWX4 724 aa23.17■■□□□ 1.3
SRRM3-205ENST00000612155 FOXD4L3Q6VB84 417 aaPredicted RBP23.17■■□□□ 1.3
SRRM3-205ENST00000612155 DPF2Q92785 391 aa23.17■■□□□ 1.3
SRRM3-205ENST00000612155 SMC3Q9UQE7 1217 aa23.17■■□□□ 1.3
SRRM3-205ENST00000612155 CLRN2A0PK11 232 aa23.16■■□□□ 1.3
SRRM3-205ENST00000612155 GLTPD2A6NH11 291 aa23.16■■□□□ 1.3
SRRM3-205ENST00000612155 TRPM4Q8TD43 1214 aa23.16■■□□□ 1.3
SRRM3-205ENST00000612155 HSPD1P10809 573 aaKnown RBP23.16■■□□□ 1.3
SRRM3-205ENST00000612155 GJB2P29033 226 aa23.16■■□□□ 1.3
SRRM3-205ENST00000612155 DLGAP5Q15398 846 aa23.16■■□□□ 1.3
SRRM3-205ENST00000612155 CDC42EP5Q6NZY7 148 aa23.16■■□□□ 1.3
SRRM3-205ENST00000612155 SLF2Q8IX21 1173 aa23.16■■□□□ 1.3
SRRM3-205ENST00000612155 FAM163AQ96GL9 167 aaPredicted RBP23.16■■□□□ 1.3
SRRM3-205ENST00000612155 ZDHHC15Q96MV8 337 aa23.16■■□□□ 1.3
SRRM3-205ENST00000612155 PANK2Q9BZ23 570 aa23.16■■□□□ 1.3
SRRM3-205ENST00000612155 USP40Q9NVE5 1235 aa23.16■■□□□ 1.3
SRRM3-205ENST00000612155 SLC4A4Q9Y6R1 1079 aa23.16■■□□□ 1.3
SRRM3-205ENST00000612155 RHBDL3P58872 404 aa23.15■■□□□ 1.3
SRRM3-205ENST00000612155 NOL10Q9BSC4 688 aaKnown RBP23.15■■□□□ 1.3
SRRM3-205ENST00000612155 DSCC1Q9BVC3 393 aa23.15■■□□□ 1.3
SRRM3-205ENST00000612155 APPP05067 770 aa23.14■■□□□ 1.3
SRRM3-205ENST00000612155 NEK1Q96PY6 1258 aa23.14■■□□□ 1.3
SRRM3-205ENST00000612155 SPDYE2BA6NHP3 402 aa23.14■■□□□ 1.29
SRRM3-205ENST00000612155 WNT10BO00744 389 aa23.14■■□□□ 1.29
SRRM3-205ENST00000612155 STX6O43752 255 aa23.14■■□□□ 1.29
SRRM3-205ENST00000612155 BAG3O95817 575 aa23.14■■□□□ 1.29
SRRM3-205ENST00000612155 SPDYE6P0CI01 402 aa23.14■■□□□ 1.29
SRRM3-205ENST00000612155 ZSCAN22P10073 491 aaPredicted RBP23.14■■□□□ 1.29
SRRM3-205ENST00000612155 ZNF280AP59817 542 aaPredicted RBP23.14■■□□□ 1.29
SRRM3-205ENST00000612155 TGFBRAP1Q8WUH2 860 aa23.14■■□□□ 1.29
SRRM3-205ENST00000612155 H7C1D1 291 aa23.13■■□□□ 1.29
SRRM3-205ENST00000612155 NFIAQ12857 509 aa23.13■■□□□ 1.29
SRRM3-205ENST00000612155 PICALMQ13492 652 aa23.13■■□□□ 1.29
SRRM3-205ENST00000612155 KRT32Q14532 448 aa23.13■■□□□ 1.29
SRRM3-205ENST00000612155 CAVIN1Q6NZI2 390 aaKnown RBP23.13■■□□□ 1.29
SRRM3-205ENST00000612155 RBM27Q9P2N5 1060 aaKnown RBP23.13■■□□□ 1.29
SRRM3-205ENST00000612155 HDLBPQ00341 1268 aaKnown RBP23.13■■□□□ 1.29
SRRM3-205ENST00000612155 EVX2Q03828 476 aa23.13■■□□□ 1.29
SRRM3-205ENST00000612155 MAPKAPK5Q8IW41 473 aa23.13■■□□□ 1.29
SRRM3-205ENST00000612155 TEX11Q8IYF3 940 aa23.13■■□□□ 1.29
SRRM3-205ENST00000612155 GDPD2Q9HCC8 539 aa23.13■■□□□ 1.29
SRRM3-205ENST00000612155 EPB41L4AQ9HCS5 686 aaPredicted RBP23.13■■□□□ 1.29
SRRM3-205ENST00000612155 SMIM22K7EJ46 135 aa23.12■■□□□ 1.29
SRRM3-205ENST00000612155 NCLP19338 710 aaKnown RBP23.12■■□□□ 1.29
SRRM3-205ENST00000612155 HIRAP54198 1017 aaPredicted RBP23.12■■□□□ 1.29
SRRM3-205ENST00000612155 KIF4BQ2VIQ3 1234 aa23.12■■□□□ 1.29
SRRM3-205ENST00000612155 MTMR6Q9Y217 621 aa23.12■■□□□ 1.29
SRRM3-205ENST00000612155 GSG1L2A8MUP6 293 aa23.11■■□□□ 1.29
SRRM3-205ENST00000612155 LMOD1P29536 600 aaPredicted RBP23.11■■□□□ 1.29
SRRM3-205ENST00000612155 PPP4CP60510 307 aa23.11■■□□□ 1.29
SRRM3-205ENST00000612155 MRIQ9BWK5 157 aa23.11■■□□□ 1.29
SRRM3-205ENST00000612155 GRPEL1Q9HAV7 217 aa23.11■■□□□ 1.29
SRRM3-205ENST00000612155 DDX4Q9NQI0 724 aaKnown RBP23.11■■□□□ 1.29
SRRM3-205ENST00000612155 POTECB2RU33 542 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms