RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 PKP1Q13835 747 aa14.51□□□□□ -0.09
CBWD1-220ENST00000612045 DALRD3Q5D0E6 543 aaKnown RBP14.51□□□□□ -0.09
CBWD1-220ENST00000612045 TNPO1Q92973 898 aaKnown RBP14.51□□□□□ -0.09
CBWD1-220ENST00000612045 ARPP21Q9UBL0 812 aaPredicted RBP14.51□□□□□ -0.09
CBWD1-220ENST00000612045 CD2APQ9Y5K6 639 aa14.51□□□□□ -0.09
CBWD1-220ENST00000612045 SCN9AQ15858 1988 aa14.51□□□□□ -0.09
CBWD1-220ENST00000612045 USP17L3A6NCW0 530 aa14.5□□□□□ -0.09
CBWD1-220ENST00000612045 USP17L4A6NCW7 530 aa14.5□□□□□ -0.09
CBWD1-220ENST00000612045 SMIM22K7EJ46 135 aa14.5□□□□□ -0.09
CBWD1-220ENST00000612045 PFKFB2O60825 505 aa14.5□□□□□ -0.09
CBWD1-220ENST00000612045 KDM4AO75164 1064 aa14.5□□□□□ -0.09
CBWD1-220ENST00000612045 PLCG2P16885 1265 aa14.5□□□□□ -0.09
CBWD1-220ENST00000612045 SBK1Q52WX2 424 aa14.5□□□□□ -0.09
CBWD1-220ENST00000612045 DACT2Q5SW24 774 aa14.5□□□□□ -0.09
CBWD1-220ENST00000612045 USP17L1Q7RTZ2 530 aa14.5□□□□□ -0.09
CBWD1-220ENST00000612045 STK11IPQ8N1F8 1099 aa14.5□□□□□ -0.09
CBWD1-220ENST00000612045 ZNF274Q96GC6 653 aaPredicted RBP14.5□□□□□ -0.09
CBWD1-220ENST00000612045 MCM9Q9NXL9 1143 aa14.5□□□□□ -0.09
CBWD1-220ENST00000612045 ZSWIM5Q9P217 1185 aa14.5□□□□□ -0.09
CBWD1-220ENST00000612045 DAGLAQ9Y4D2 1042 aa14.5□□□□□ -0.09
CBWD1-220ENST00000612045 RHBDL3P58872 404 aa14.5□□□□□ -0.09
CBWD1-220ENST00000612045 RRP12Q5JTH9 1297 aaKnown RBP14.5□□□□□ -0.09
CBWD1-220ENST00000612045 TGFBRAP1Q8WUH2 860 aa14.5□□□□□ -0.09
CBWD1-220ENST00000612045 TOMM22Q9NS69 142 aa14.5□□□□□ -0.09
CBWD1-220ENST00000612045 ANGEL1Q9UNK9 670 aaKnown RBP14.5□□□□□ -0.09
CBWD1-220ENST00000612045 SH2B2O14492 632 aaPredicted RBP14.49□□□□□ -0.09
CBWD1-220ENST00000612045 FGRP09769 529 aa14.49□□□□□ -0.09
CBWD1-220ENST00000612045 USP17L8P0C7I0 530 aa14.49□□□□□ -0.09
CBWD1-220ENST00000612045 PCP11498 1178 aaKnown RBP14.49□□□□□ -0.09
CBWD1-220ENST00000612045 GJB2P29033 226 aa14.49□□□□□ -0.09
CBWD1-220ENST00000612045 PDIA3P30101 505 aaKnown RBP14.49□□□□□ -0.09
CBWD1-220ENST00000612045 BRCA1P38398 1863 aaKnown RBP14.49□□□□□ -0.09
CBWD1-220ENST00000612045 SCRN1Q12765 414 aa14.49□□□□□ -0.09
CBWD1-220ENST00000612045 TEX11Q8IYF3 940 aa14.49□□□□□ -0.09
CBWD1-220ENST00000612045 KLHL34Q8N239 644 aa14.49□□□□□ -0.09
CBWD1-220ENST00000612045 TMEM87BQ96K49 555 aa14.49□□□□□ -0.09
CBWD1-220ENST00000612045 ANP32EQ9BTT0 268 aa14.49□□□□□ -0.09
CBWD1-220ENST00000612045 ZNF277Q9NRM2 450 aaPredicted RBP14.49□□□□□ -0.09
CBWD1-220ENST00000612045 ZDHHC9Q9Y397 364 aa14.49□□□□□ -0.09
CBWD1-220ENST00000612045 LAMB1P07942 1786 aa14.48□□□□□ -0.09
CBWD1-220ENST00000612045 YDJCA8MPS7 323 aa14.48□□□□□ -0.09
CBWD1-220ENST00000612045 CYP2D6P10635 497 aa14.48□□□□□ -0.09
CBWD1-220ENST00000612045 EVX2Q03828 476 aa14.48□□□□□ -0.09
CBWD1-220ENST00000612045 HHIPL2Q6UWX4 724 aa14.48□□□□□ -0.09
CBWD1-220ENST00000612045 IGDCC4Q8TDY8 1250 aa14.48□□□□□ -0.09
CBWD1-220ENST00000612045 VPS33BQ9H267 617 aa14.48□□□□□ -0.09
CBWD1-220ENST00000612045 BRPF3Q9ULD4 1205 aa14.48□□□□□ -0.09
CBWD1-220ENST00000612045 NAP1L2Q9ULW6 460 aaPredicted RBP14.48□□□□□ -0.09
CBWD1-220ENST00000612045 ZNF646O15015 1829 aaPredicted RBP14.48□□□□□ -0.09
CBWD1-220ENST00000612045 UTRNP46939 3433 aa14.48□□□□□ -0.09
CBWD1-220ENST00000612045 KLF18A0A0U1RQI7 1052 aa14.48□□□□□ -0.09
CBWD1-220ENST00000612045 BRD1O95696 1058 aa14.48□□□□□ -0.09
CBWD1-220ENST00000612045 SLC3A2P08195 630 aaKnown RBP14.48□□□□□ -0.09
CBWD1-220ENST00000612045 SCNN1DP51172 638 aa14.48□□□□□ -0.09
CBWD1-220ENST00000612045 C12orf60Q5U649 245 aa14.48□□□□□ -0.09
CBWD1-220ENST00000612045 MAPKAPK5Q8IW41 473 aa14.48□□□□□ -0.09
CBWD1-220ENST00000612045 LARGE2Q8N3Y3 721 aa14.48□□□□□ -0.09
CBWD1-220ENST00000612045 ESR2Q92731 530 aa14.48□□□□□ -0.09
CBWD1-220ENST00000612045 TEKT1Q969V4 418 aa14.48□□□□□ -0.09
CBWD1-220ENST00000612045 NAV1Q8NEY1 1877 aa14.47□□□□□ -0.09
CBWD1-220ENST00000612045 CDK5RAP2Q96SN8 1893 aa14.47□□□□□ -0.09
CBWD1-220ENST00000612045 IFIT3O14879 490 aaKnown RBP14.47□□□□□ -0.09
CBWD1-220ENST00000612045 DTNBO60941 627 aa14.47□□□□□ -0.09
CBWD1-220ENST00000612045 LIFRP42702 1097 aa14.47□□□□□ -0.09
CBWD1-220ENST00000612045 CCT2P78371 535 aaKnown RBP14.47□□□□□ -0.09
CBWD1-220ENST00000612045 TMEM67Q5HYA8 995 aa14.47□□□□□ -0.09
CBWD1-220ENST00000612045 KIAA0825Q8IV33 1275 aa14.47□□□□□ -0.09
CBWD1-220ENST00000612045 MTA3Q9BTC8 594 aa14.47□□□□□ -0.09
CBWD1-220ENST00000612045 MRIQ9BWK5 157 aa14.47□□□□□ -0.09
CBWD1-220ENST00000612045 LY9Q9HBG7 655 aa14.47□□□□□ -0.09
CBWD1-220ENST00000612045 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.47□□□□□ -0.09
CBWD1-220ENST00000612045 FLT1P17948 1338 aa14.47□□□□□ -0.09
CBWD1-220ENST00000612045 PRDM1O75626 825 aa14.46□□□□□ -0.09
CBWD1-220ENST00000612045 AMOTL1Q8IY63 956 aa14.46□□□□□ -0.09
CBWD1-220ENST00000612045 LLPHQ9BRT6 129 aaKnown RBP14.46□□□□□ -0.09
CBWD1-220ENST00000612045 GOLGA8BA8MQT2 603 aa14.45□□□□□ -0.1
CBWD1-220ENST00000612045 ORC4O43929 436 aa14.45□□□□□ -0.1
CBWD1-220ENST00000612045 SYT1P21579 422 aa14.45□□□□□ -0.1
CBWD1-220ENST00000612045 CRKP46108 304 aa14.45□□□□□ -0.1
CBWD1-220ENST00000612045 HDLBPQ00341 1268 aaKnown RBP14.45□□□□□ -0.1
CBWD1-220ENST00000612045 PDE4BQ07343 736 aa14.45□□□□□ -0.1
CBWD1-220ENST00000612045 SART3Q15020 963 aaKnown RBP14.45□□□□□ -0.1
CBWD1-220ENST00000612045 SLC4A8Q2Y0W8 1093 aa14.45□□□□□ -0.1
CBWD1-220ENST00000612045 APOBEC3HQ6NTF7 200 aaKnown RBP14.45□□□□□ -0.1
CBWD1-220ENST00000612045 SGMS1Q86VZ5 419 aa14.45□□□□□ -0.1
CBWD1-220ENST00000612045 CHMP4CQ96CF2 233 aa14.45□□□□□ -0.1
CBWD1-220ENST00000612045 GBP4Q96PP9 640 aa14.45□□□□□ -0.1
CBWD1-220ENST00000612045 SENP2Q9HC62 589 aa14.45□□□□□ -0.1
CBWD1-220ENST00000612045 HPS5Q9UPZ3 1129 aa14.45□□□□□ -0.1
CBWD1-220ENST00000612045 COL4A5P29400 1685 aa14.45□□□□□ -0.1
CBWD1-220ENST00000612045 STX6O43752 255 aa14.45□□□□□ -0.1
CBWD1-220ENST00000612045 RANBP6O60518 1105 aaKnown RBP14.45□□□□□ -0.1
CBWD1-220ENST00000612045 JAK2O60674 1132 aa14.45□□□□□ -0.1
CBWD1-220ENST00000612045 POLR3DP05423 398 aaPredicted RBP14.45□□□□□ -0.1
CBWD1-220ENST00000612045 MCM4P33991 863 aa14.45□□□□□ -0.1
CBWD1-220ENST00000612045 IARSP41252 1262 aaKnown RBP14.45□□□□□ -0.1
CBWD1-220ENST00000612045 CLEC17AQ6ZS10 378 aa14.45□□□□□ -0.1
CBWD1-220ENST00000612045 SMARCC2Q8TAQ2 1214 aa14.45□□□□□ -0.1
CBWD1-220ENST00000612045 ZDHHC15Q96MV8 337 aa14.45□□□□□ -0.1
CBWD1-220ENST00000612045 ZKSCAN3Q9BRR0 538 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms