RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 KIF2CQ99661 725 aa12.32□□□□□ -0.44
CDC42EP3-206ENST00000611976 MMRN2Q9H8L6 949 aa12.32□□□□□ -0.44
CDC42EP3-206ENST00000611976 PCDHA7Q9UN72 937 aa12.32□□□□□ -0.44
CDC42EP3-206ENST00000611976 KCNQ3O43525 872 aa12.32□□□□□ -0.44
CDC42EP3-206ENST00000611976 ITGA6P23229 1130 aa12.32□□□□□ -0.44
CDC42EP3-206ENST00000611976 GIGYF2Q6Y7W6 1299 aaKnown RBP12.32□□□□□ -0.44
CDC42EP3-206ENST00000611976 FAM76AQ8TAV0 307 aa12.32□□□□□ -0.44
CDC42EP3-206ENST00000611976 GOLGA6L10A0A0M3HER8 536 aa12.32□□□□□ -0.44
CDC42EP3-206ENST00000611976 ETF1P62495 437 aaKnown RBP12.32□□□□□ -0.44
CDC42EP3-206ENST00000611976 SCRN1Q12765 414 aa12.32□□□□□ -0.44
CDC42EP3-206ENST00000611976 PI4K2BQ8TCG2 481 aa12.32□□□□□ -0.44
CDC42EP3-206ENST00000611976 CCDC51Q96ER9 411 aa12.32□□□□□ -0.44
CDC42EP3-206ENST00000611976 ZNF594Q96JF6 807 aaPredicted RBP12.32□□□□□ -0.44
CDC42EP3-206ENST00000611976 RTEL1Q9NZ71 1219 aa12.32□□□□□ -0.44
CDC42EP3-206ENST00000611976 PLCD1P51178 756 aa12.32□□□□□ -0.44
CDC42EP3-206ENST00000611976 VAV2P52735 878 aa12.32□□□□□ -0.44
CDC42EP3-206ENST00000611976 MTX1Q13505 466 aa12.32□□□□□ -0.44
CDC42EP3-206ENST00000611976 UTP14CQ5TAP6 766 aaKnown RBP12.32□□□□□ -0.44
CDC42EP3-206ENST00000611976 ERMNQ8TAM6 284 aa12.32□□□□□ -0.44
CDC42EP3-206ENST00000611976 FERMT2Q96AC1 680 aa12.32□□□□□ -0.44
CDC42EP3-206ENST00000611976 ZNF496Q96IT1 587 aaPredicted RBP12.32□□□□□ -0.44
CDC42EP3-206ENST00000611976 ZFP91Q96JP5 570 aaPredicted RBP12.32□□□□□ -0.44
CDC42EP3-206ENST00000611976 IQSEC3Q9UPP2 1182 aaPredicted RBP12.32□□□□□ -0.44
CDC42EP3-206ENST00000611976 HSPD1P10809 573 aaKnown RBP12.31□□□□□ -0.44
CDC42EP3-206ENST00000611976 ZNF174Q15697 407 aa12.31□□□□□ -0.44
CDC42EP3-206ENST00000611976 NEK11Q8NG66 645 aa12.31□□□□□ -0.44
CDC42EP3-206ENST00000611976 ZKSCAN3Q9BRR0 538 aa12.31□□□□□ -0.44
CDC42EP3-206ENST00000611976 EHMT1Q9H9B1 1298 aa12.31□□□□□ -0.44
CDC42EP3-206ENST00000611976 EFCAB8A8MWE9 144 aa12.31□□□□□ -0.44
CDC42EP3-206ENST00000611976 HMGB2P26583 209 aaKnown RBP12.31□□□□□ -0.44
CDC42EP3-206ENST00000611976 DMTNQ08495 405 aa12.31□□□□□ -0.44
CDC42EP3-206ENST00000611976 PAK1Q13153 545 aa12.31□□□□□ -0.44
CDC42EP3-206ENST00000611976 NUTM2BA6NNL0 878 aaPredicted RBP12.31□□□□□ -0.44
CDC42EP3-206ENST00000611976 NUTM2EB1AL46 878 aaPredicted RBP12.31□□□□□ -0.44
CDC42EP3-206ENST00000611976 PHACTR2O75167 634 aa12.31□□□□□ -0.44
CDC42EP3-206ENST00000611976 PNOCQ13519 176 aa12.31□□□□□ -0.44
CDC42EP3-206ENST00000611976 FCHSD1Q86WN1 690 aa12.31□□□□□ -0.44
CDC42EP3-206ENST00000611976 FAM89AQ96GI7 184 aa12.31□□□□□ -0.44
CDC42EP3-206ENST00000611976 IQGAP1P46940 1657 aa12.31□□□□□ -0.44
CDC42EP3-206ENST00000611976 BRD3Q15059 726 aa12.31□□□□□ -0.44
CDC42EP3-206ENST00000611976 HELBQ8NG08 1087 aaPredicted RBP12.31□□□□□ -0.44
CDC42EP3-206ENST00000611976 RPGRQ92834 1020 aaKnown RBP12.31□□□□□ -0.44
CDC42EP3-206ENST00000611976 PHKBQ93100 1093 aa12.31□□□□□ -0.44
CDC42EP3-206ENST00000611976 KIAA1210Q9ULL0 1709 aa12.31□□□□□ -0.44
CDC42EP3-206ENST00000611976 ZMYM6O95789 1325 aa12.3□□□□□ -0.44
CDC42EP3-206ENST00000611976 GNA11P29992 359 aa12.3□□□□□ -0.44
CDC42EP3-206ENST00000611976 MNAT1P51948 309 aa12.3□□□□□ -0.44
CDC42EP3-206ENST00000611976 TMEM132AQ24JP5 1023 aa12.3□□□□□ -0.44
CDC42EP3-206ENST00000611976 TTC31Q49AM3 519 aaPredicted RBP12.3□□□□□ -0.44
CDC42EP3-206ENST00000611976 TRIML1Q8N9V2 468 aa12.3□□□□□ -0.44
CDC42EP3-206ENST00000611976 AFAP1L1Q8TED9 768 aa12.3□□□□□ -0.44
CDC42EP3-206ENST00000611976 LMBR1Q8WVP7 490 aa12.3□□□□□ -0.44
CDC42EP3-206ENST00000611976 INCENPQ9NQS7 918 aa12.3□□□□□ -0.44
CDC42EP3-206ENST00000611976 PLEKHG1Q9ULL1 1385 aa12.3□□□□□ -0.44
CDC42EP3-206ENST00000611976 OAS2P29728 719 aaKnown RBP12.3□□□□□ -0.44
CDC42EP3-206ENST00000611976 ZAP70P43403 619 aa12.3□□□□□ -0.44
CDC42EP3-206ENST00000611976 NUP58Q9BVL2 599 aa12.3□□□□□ -0.44
CDC42EP3-206ENST00000611976 TBCAO75347 108 aaKnown RBP12.3□□□□□ -0.44
CDC42EP3-206ENST00000611976 PDIA3P30101 505 aaKnown RBP12.3□□□□□ -0.44
CDC42EP3-206ENST00000611976 ARFGAP2Q8N6H7 521 aa12.3□□□□□ -0.44
CDC42EP3-206ENST00000611976 VPS16Q9H269 839 aa12.3□□□□□ -0.44
CDC42EP3-206ENST00000611976 PRPF4BQ13523 1007 aaKnown RBP12.3□□□□□ -0.44
CDC42EP3-206ENST00000611976 ERCC6LQ2NKX8 1250 aa12.3□□□□□ -0.44
CDC42EP3-206ENST00000611976 TTC38Q5R3I4 469 aa12.3□□□□□ -0.44
CDC42EP3-206ENST00000611976 KRT79Q5XKE5 535 aa12.3□□□□□ -0.44
CDC42EP3-206ENST00000611976 SEC62Q99442 399 aaKnown RBP12.3□□□□□ -0.44
CDC42EP3-206ENST00000611976 ARMT1Q9H993 441 aa12.3□□□□□ -0.44
CDC42EP3-206ENST00000611976 GPR108Q9NPR9 543 aa12.3□□□□□ -0.44
CDC42EP3-206ENST00000611976 PRPHP41219 470 aa12.29□□□□□ -0.44
CDC42EP3-206ENST00000611976 NDUFA8P51970 172 aa12.29□□□□□ -0.44
CDC42EP3-206ENST00000611976 GTF2A1P52655 376 aaPredicted RBP12.29□□□□□ -0.44
CDC42EP3-206ENST00000611976 NECTIN1Q15223 517 aa12.29□□□□□ -0.44
CDC42EP3-206ENST00000611976 RRP36Q96EU6 259 aaKnown RBP12.29□□□□□ -0.44
CDC42EP3-206ENST00000611976 TMOD2Q9NZR1 351 aa12.29□□□□□ -0.44
CDC42EP3-206ENST00000611976 NRBP1Q9UHY1 535 aa12.29□□□□□ -0.44
CDC42EP3-206ENST00000611976 NIP7Q9Y221 180 aaKnown RBP eCLIP12.29□□□□□ -0.44
CDC42EP3-206ENST00000611976 CYP2E1P05181 493 aaPredicted RBP12.29□□□□□ -0.44
CDC42EP3-206ENST00000611976 PDE8AO60658 829 aa12.29□□□□□ -0.44
CDC42EP3-206ENST00000611976 LARGE1O95461 756 aa12.29□□□□□ -0.44
CDC42EP3-206ENST00000611976 KIAA0753Q2KHM9 967 aa12.29□□□□□ -0.44
CDC42EP3-206ENST00000611976 NSUN7Q8NE18 718 aaKnown RBP12.29□□□□□ -0.44
CDC42EP3-206ENST00000611976 LPIN2Q92539 896 aa12.29□□□□□ -0.44
CDC42EP3-206ENST00000611976 RCOR1Q9UKL0 485 aa12.29□□□□□ -0.44
CDC42EP3-206ENST00000611976 PPP2R2CQ9Y2T4 447 aa12.29□□□□□ -0.44
CDC42EP3-206ENST00000611976 A6NNZ2 444 aa12.29□□□□□ -0.44
CDC42EP3-206ENST00000611976 SSR1P43307 286 aaKnown RBP12.29□□□□□ -0.44
CDC42EP3-206ENST00000611976 TUBB8Q3ZCM7 444 aa12.29□□□□□ -0.44
CDC42EP3-206ENST00000611976 BBXQ8WY36 941 aaPredicted RBP12.29□□□□□ -0.44
CDC42EP3-206ENST00000611976 POLR3EQ9NVU0 708 aa12.29□□□□□ -0.44
CDC42EP3-206ENST00000611976 WWC3Q9ULE0 1092 aa12.29□□□□□ -0.44
CDC42EP3-206ENST00000611976 GSTTP1A0A1W2PQM5 241 aa12.28□□□□□ -0.44
CDC42EP3-206ENST00000611976 TNNC1P63316 161 aa12.28□□□□□ -0.44
CDC42EP3-206ENST00000611976 SLC4A8Q2Y0W8 1093 aa12.28□□□□□ -0.44
CDC42EP3-206ENST00000611976 MICALL1Q8N3F8 863 aa12.28□□□□□ -0.44
CDC42EP3-206ENST00000611976 FBXO18Q8NFZ0 1043 aa12.28□□□□□ -0.44
CDC42EP3-206ENST00000611976 DENND2AQ9ULE3 1009 aa12.28□□□□□ -0.44
CDC42EP3-206ENST00000611976 LMTK2Q8IWU2 1503 aa12.28□□□□□ -0.44
CDC42EP3-206ENST00000611976 ZNF532Q9HCE3 1301 aa12.28□□□□□ -0.44
CDC42EP3-206ENST00000611976 IKBKBO14920 756 aa12.28□□□□□ -0.44
CDC42EP3-206ENST00000611976 TBC1D8BQ0IIM8 1120 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms