RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 TGFBRAP1Q8WUH2 860 aa19.05■□□□□ 0.64
CLTCL1-207ENST00000611723 IL17RAQ96F46 866 aa19.05■□□□□ 0.64
CLTCL1-207ENST00000611723 TDRD3Q9H7E2 651 aaKnown RBP19.05■□□□□ 0.64
CLTCL1-207ENST00000611723 EPS15P42566 896 aa19.04■□□□□ 0.64
CLTCL1-207ENST00000611723 USP5P45974 858 aa19.04■□□□□ 0.64
CLTCL1-207ENST00000611723 SPDYE2Q495Y8 402 aa19.04■□□□□ 0.64
CLTCL1-207ENST00000611723 SBK1Q52WX2 424 aa19.04■□□□□ 0.64
CLTCL1-207ENST00000611723 CREB3L3Q68CJ9 461 aa19.04■□□□□ 0.64
CLTCL1-207ENST00000611723 DDRGK1Q96HY6 314 aa19.04■□□□□ 0.64
CLTCL1-207ENST00000611723 NAPBQ9H115 298 aa19.04■□□□□ 0.64
CLTCL1-207ENST00000611723 ZNF70Q9UC06 446 aaPredicted RBP19.04■□□□□ 0.64
CLTCL1-207ENST00000611723 PCNTO95613 3336 aa19.04■□□□□ 0.64
CLTCL1-207ENST00000611723 ADAMTSL1Q8N6G6 1762 aa19.04■□□□□ 0.64
CLTCL1-207ENST00000611723 SLC27A2O14975 620 aa19.03■□□□□ 0.64
CLTCL1-207ENST00000611723 LMOD1P29536 600 aaPredicted RBP19.03■□□□□ 0.64
CLTCL1-207ENST00000611723 ANAPC15P60006 121 aa19.03■□□□□ 0.64
CLTCL1-207ENST00000611723 KIF4BQ2VIQ3 1234 aa19.03■□□□□ 0.64
CLTCL1-207ENST00000611723 SAMD7Q7Z3H4 446 aa19.03■□□□□ 0.64
CLTCL1-207ENST00000611723 ADARB2Q9NS39 739 aaKnown RBP19.03■□□□□ 0.64
CLTCL1-207ENST00000611723 MYO1BO43795 1136 aa19.02■□□□□ 0.64
CLTCL1-207ENST00000611723 EGFRP00533 1210 aa19.02■□□□□ 0.64
CLTCL1-207ENST00000611723 TDO2P48775 406 aa19.02■□□□□ 0.64
CLTCL1-207ENST00000611723 NBPF9Q3BBW0 867 aa19.02■□□□□ 0.64
CLTCL1-207ENST00000611723 TBC1D10BQ4KMP7 808 aaPredicted RBP19.02■□□□□ 0.64
CLTCL1-207ENST00000611723 RNF20Q5VTR2 975 aa19.02■□□□□ 0.64
CLTCL1-207ENST00000611723 CTR9Q6PD62 1173 aa19.02■□□□□ 0.64
CLTCL1-207ENST00000611723 ANAPC4Q9UJX5 808 aa19.02■□□□□ 0.64
CLTCL1-207ENST00000611723 FLT1P17948 1338 aa19.01■□□□□ 0.63
CLTCL1-207ENST00000611723 ZNF213O14771 459 aa19.01■□□□□ 0.63
CLTCL1-207ENST00000611723 ENTPD3O75355 529 aa19.01■□□□□ 0.63
CLTCL1-207ENST00000611723 CYP21A2P08686 494 aa19.01■□□□□ 0.63
CLTCL1-207ENST00000611723 NFIAQ12857 509 aa19.01■□□□□ 0.63
CLTCL1-207ENST00000611723 IMMTQ16891 758 aaKnown RBP19.01■□□□□ 0.63
CLTCL1-207ENST00000611723 RBM26Q5T8P6 1007 aaKnown RBP19.01■□□□□ 0.63
CLTCL1-207ENST00000611723 MAPKAPK5Q8IW41 473 aa19.01■□□□□ 0.63
CLTCL1-207ENST00000611723 DDX4Q9NQI0 724 aaKnown RBP19.01■□□□□ 0.63
CLTCL1-207ENST00000611723 MCM9Q9NXL9 1143 aa19.01■□□□□ 0.63
CLTCL1-207ENST00000611723 TMOD2Q9NZR1 351 aa19.01■□□□□ 0.63
CLTCL1-207ENST00000611723 ARPP21Q9UBL0 812 aaPredicted RBP19.01■□□□□ 0.63
CLTCL1-207ENST00000611723 FAM198AQ9UFP1 575 aa19.01■□□□□ 0.63
CLTCL1-207ENST00000611723 HACL1Q9UJ83 578 aa19.01■□□□□ 0.63
CLTCL1-207ENST00000611723 CDK5RAP2Q96SN8 1893 aa19.01■□□□□ 0.63
CLTCL1-207ENST00000611723 USP17L12C9JPN9 530 aa19■□□□□ 0.63
CLTCL1-207ENST00000611723 USP17L21D6R901 530 aa19■□□□□ 0.63
CLTCL1-207ENST00000611723 ZKSCAN1P17029 563 aaPredicted RBP19■□□□□ 0.63
CLTCL1-207ENST00000611723 HIRAP54198 1017 aaPredicted RBP19■□□□□ 0.63
CLTCL1-207ENST00000611723 FAM83AQ86UY5 434 aa19■□□□□ 0.63
CLTCL1-207ENST00000611723 RASEFQ8IZ41 740 aa19■□□□□ 0.63
CLTCL1-207ENST00000611723 TRPM4Q8TD43 1214 aa19■□□□□ 0.63
CLTCL1-207ENST00000611723 OSBPL5Q9H0X9 879 aaPredicted RBP19■□□□□ 0.63
CLTCL1-207ENST00000611723 PALD1Q9ULE6 856 aa19■□□□□ 0.63
CLTCL1-207ENST00000611723 FOCADQ5VW36 1801 aa19■□□□□ 0.63
CLTCL1-207ENST00000611723 ECM29Q5VYK3 1845 aa19■□□□□ 0.63
CLTCL1-207ENST00000611723 IQCA1LA6NCM1 817 aa18.99■□□□□ 0.63
CLTCL1-207ENST00000611723 FOXN1O15353 648 aa18.99■□□□□ 0.63
CLTCL1-207ENST00000611723 C12orf60Q5U649 245 aa18.99■□□□□ 0.63
CLTCL1-207ENST00000611723 USP50Q70EL3 339 aaPredicted RBP18.99■□□□□ 0.63
CLTCL1-207ENST00000611723 SNX14Q9Y5W7 946 aa18.99■□□□□ 0.63
CLTCL1-207ENST00000611723 CLRN2A0PK11 232 aa18.98■□□□□ 0.63
CLTCL1-207ENST00000611723 CACNB3P54284 484 aa18.98■□□□□ 0.63
CLTCL1-207ENST00000611723 PPARAQ07869 468 aa18.98■□□□□ 0.63
CLTCL1-207ENST00000611723 PICALMQ13492 652 aa18.98■□□□□ 0.63
CLTCL1-207ENST00000611723 KRT32Q14532 448 aa18.98■□□□□ 0.63
CLTCL1-207ENST00000611723 CHADLQ6NUI6 762 aa18.98■□□□□ 0.63
CLTCL1-207ENST00000611723 FAM151AQ8WW52 585 aa18.98■□□□□ 0.63
CLTCL1-207ENST00000611723 KIF2CQ99661 725 aa18.98■□□□□ 0.63
CLTCL1-207ENST00000611723 DHX36Q9H2U1 1008 aaKnown RBP18.98■□□□□ 0.63
CLTCL1-207ENST00000611723 TAOK2Q9UL54 1235 aa18.98■□□□□ 0.63
CLTCL1-207ENST00000611723 SCN4AP35499 1836 aa18.97■□□□□ 0.63
CLTCL1-207ENST00000611723 COL2A1P02458 1487 aaPredicted RBP18.97■□□□□ 0.63
CLTCL1-207ENST00000611723 MINDY4BA8MYZ0 360 aa18.97■□□□□ 0.63
CLTCL1-207ENST00000611723 POLR3DP05423 398 aaPredicted RBP18.97■□□□□ 0.63
CLTCL1-207ENST00000611723 FGRP09769 529 aa18.97■□□□□ 0.63
CLTCL1-207ENST00000611723 EPHX2P34913 555 aa18.97■□□□□ 0.63
CLTCL1-207ENST00000611723 TTC6Q86TZ1 520 aa18.97■□□□□ 0.63
CLTCL1-207ENST00000611723 ZFPM1Q8IX07 1006 aa18.97■□□□□ 0.63
CLTCL1-207ENST00000611723 AMOTL1Q8IY63 956 aa18.97■□□□□ 0.63
CLTCL1-207ENST00000611723 TM6SF1Q9BZW5 370 aa18.97■□□□□ 0.63
CLTCL1-207ENST00000611723 NBPF3Q9H094 633 aa18.97■□□□□ 0.63
CLTCL1-207ENST00000611723 CREBZFQ9NS37 354 aa18.97■□□□□ 0.63
CLTCL1-207ENST00000611723 BAZ2AQ9UIF9 1905 aaKnown RBP18.97■□□□□ 0.63
CLTCL1-207ENST00000611723 PCP11498 1178 aaKnown RBP18.96■□□□□ 0.63
CLTCL1-207ENST00000611723 HAND2P61296 217 aa18.96■□□□□ 0.63
CLTCL1-207ENST00000611723 TNFAIP1Q13829 316 aa18.96■□□□□ 0.63
CLTCL1-207ENST00000611723 ZC3H15Q8WU90 426 aaKnown RBP18.96■□□□□ 0.63
CLTCL1-207ENST00000611723 STAG1Q8WVM7 1258 aa18.96■□□□□ 0.63
CLTCL1-207ENST00000611723 TAF1DQ9H5J8 278 aaPredicted RBP18.96■□□□□ 0.63
CLTCL1-207ENST00000611723 TSHZ2Q9NRE2 1034 aa18.96■□□□□ 0.63
CLTCL1-207ENST00000611723 PGAP2Q9UHJ9 254 aa18.96■□□□□ 0.63
CLTCL1-207ENST00000611723 SAP30BPQ9UHR5 308 aaKnown RBP18.96■□□□□ 0.63
CLTCL1-207ENST00000611723 TAF6LQ9Y6J9 622 aa18.96■□□□□ 0.63
CLTCL1-207ENST00000611723 PITPNM2Q9BZ72 1349 aa18.96■□□□□ 0.63
CLTCL1-207ENST00000611723 CNTNAP1P78357 1384 aa18.95■□□□□ 0.62
CLTCL1-207ENST00000611723 ATRNL1Q5VV63 1379 aa18.95■□□□□ 0.62
CLTCL1-207ENST00000611723 CYP2D7A0A087X1C5 515 aa18.95■□□□□ 0.62
CLTCL1-207ENST00000611723 TCP10L2B9ZVM9 353 aa18.95■□□□□ 0.62
CLTCL1-207ENST00000611723 E7EWF7 191 aa18.95■□□□□ 0.62
CLTCL1-207ENST00000611723 CYP2D6P10635 497 aa18.95■□□□□ 0.62
CLTCL1-207ENST00000611723 TNNI2P48788 182 aa18.95■□□□□ 0.62
CLTCL1-207ENST00000611723 PLCD1P51178 756 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms