RNA–Protein interactions for RNA: ENST00000611127.4

FAM228B-205, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene FAM228B, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-205ENST00000611127 PARP4Q9UKK3 1724 aaKnown RBP10.55□□□□□ -0.72
FAM228B-205ENST00000611127 KIF24Q5T7B8 1368 aa10.54□□□□□ -0.72
FAM228B-205ENST00000611127 C1QTNF9BB2RNN3 333 aa10.54□□□□□ -0.72
FAM228B-205ENST00000611127 LILRB5O75023 590 aa10.54□□□□□ -0.72
FAM228B-205ENST00000611127 MICAL2O94851 1124 aa10.54□□□□□ -0.72
FAM228B-205ENST00000611127 ARID4AP29374 1257 aaPredicted RBP10.54□□□□□ -0.72
FAM228B-205ENST00000611127 R3HDM1Q15032 1099 aaKnown RBP10.54□□□□□ -0.72
FAM228B-205ENST00000611127 C20orf204Q6ZNR8 217 aa10.54□□□□□ -0.72
FAM228B-205ENST00000611127 ZMIZ1Q9ULJ6 1067 aa10.54□□□□□ -0.72
FAM228B-205ENST00000611127 SLC6A14Q9UN76 642 aa10.54□□□□□ -0.72
FAM228B-205ENST00000611127 TNS2Q63HR2 1409 aa10.53□□□□□ -0.72
FAM228B-205ENST00000611127 HSP90AB2PQ58FF8 381 aa10.53□□□□□ -0.72
FAM228B-205ENST00000611127 CD163Q86VB7 1156 aa10.53□□□□□ -0.72
FAM228B-205ENST00000611127 PANK3Q9H999 370 aa10.53□□□□□ -0.72
FAM228B-205ENST00000611127 LRRC37A3O60309 1634 aa10.53□□□□□ -0.72
FAM228B-205ENST00000611127 INSRP06213 1382 aa10.52□□□□□ -0.72
FAM228B-205ENST00000611127 SMG6Q86US8 1419 aaKnown RBP10.52□□□□□ -0.73
FAM228B-205ENST00000611127 NFKB1P19838 968 aa10.52□□□□□ -0.73
FAM228B-205ENST00000611127 FKBP5Q13451 457 aaPredicted RBP10.52□□□□□ -0.73
FAM228B-205ENST00000611127 OCLNQ16625 522 aa10.52□□□□□ -0.73
FAM228B-205ENST00000611127 NBPF6Q5VWK0 638 aa10.52□□□□□ -0.73
FAM228B-205ENST00000611127 PTF1AQ7RTS3 328 aa10.52□□□□□ -0.73
FAM228B-205ENST00000611127 DDX54Q8TDD1 881 aaKnown RBP10.52□□□□□ -0.73
FAM228B-205ENST00000611127 PBXIP1Q96AQ6 731 aa10.52□□□□□ -0.73
FAM228B-205ENST00000611127 IFT43Q96FT9 208 aa10.52□□□□□ -0.73
FAM228B-205ENST00000611127 NBPF4Q96M43 638 aa10.52□□□□□ -0.73
FAM228B-205ENST00000611127 NACC1Q96RE7 527 aa10.52□□□□□ -0.73
FAM228B-205ENST00000611127 FLT4P35916 1363 aa10.52□□□□□ -0.73
FAM228B-205ENST00000611127 PPM1GO15355 546 aaPredicted RBP10.51□□□□□ -0.73
FAM228B-205ENST00000611127 KCNQ2O43526 872 aa10.51□□□□□ -0.73
FAM228B-205ENST00000611127 NID1P14543 1247 aa10.51□□□□□ -0.73
FAM228B-205ENST00000611127 TRIM28Q13263 835 aaKnown RBP10.51□□□□□ -0.73
FAM228B-205ENST00000611127 COL9A3Q14050 684 aaPredicted RBP10.51□□□□□ -0.73
FAM228B-205ENST00000611127 ZCRB1Q8TBF4 217 aaKnown RBP10.51□□□□□ -0.73
FAM228B-205ENST00000611127 ACSBG1Q96GR2 724 aa10.51□□□□□ -0.73
FAM228B-205ENST00000611127 DNAJB12Q9NXW2 375 aaKnown RBP10.51□□□□□ -0.73
FAM228B-205ENST00000611127 PEAK1Q9H792 1746 aa10.5□□□□□ -0.73
FAM228B-205ENST00000611127 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.5□□□□□ -0.73
FAM228B-205ENST00000611127 ADAM23O75077 832 aa10.5□□□□□ -0.73
FAM228B-205ENST00000611127 PTCD1O75127 700 aaKnown RBP10.5□□□□□ -0.73
FAM228B-205ENST00000611127 EGFRP00533 1210 aa10.5□□□□□ -0.73
FAM228B-205ENST00000611127 RAPGEF4Q8WZA2 1011 aa10.5□□□□□ -0.73
FAM228B-205ENST00000611127 WASHC2AQ641Q2 1341 aa10.5□□□□□ -0.73
FAM228B-205ENST00000611127 TNS1Q9HBL0 1735 aaKnown RBP10.5□□□□□ -0.73
FAM228B-205ENST00000611127 CHRNA4P43681 627 aa10.49□□□□□ -0.73
FAM228B-205ENST00000611127 TBC1D8BQ0IIM8 1120 aa10.49□□□□□ -0.73
FAM228B-205ENST00000611127 PRIMPOLQ96LW4 560 aa10.49□□□□□ -0.73
FAM228B-205ENST00000611127 IGFLR1Q9H665 355 aa10.49□□□□□ -0.73
FAM228B-205ENST00000611127 POLKQ9UBT6 870 aa10.49□□□□□ -0.73
FAM228B-205ENST00000611127 LTN1O94822 1766 aa10.48□□□□□ -0.73
FAM228B-205ENST00000611127 PRMT3O60678 531 aa10.48□□□□□ -0.73
FAM228B-205ENST00000611127 BRD2P25440 801 aaKnown RBP10.48□□□□□ -0.73
FAM228B-205ENST00000611127 TXNRD1Q16881 649 aa10.48□□□□□ -0.73
FAM228B-205ENST00000611127 C16orf46Q6P387 395 aa10.48□□□□□ -0.73
FAM228B-205ENST00000611127 USHBP1Q8N6Y0 703 aa10.48□□□□□ -0.73
FAM228B-205ENST00000611127 STK32AQ8WU08 396 aa10.48□□□□□ -0.73
FAM228B-205ENST00000611127 FRRS1LQ9P0K9 344 aa10.48□□□□□ -0.73
FAM228B-205ENST00000611127 CXXC1Q9P0U4 656 aaPredicted RBP10.48□□□□□ -0.73
FAM228B-205ENST00000611127 LRFN2Q9ULH4 789 aa10.48□□□□□ -0.73
FAM228B-205ENST00000611127 KNSTRNQ9Y448 316 aa10.48□□□□□ -0.73
FAM228B-205ENST00000611127 SRCAPQ6ZRS2 3230 aa10.48□□□□□ -0.73
FAM228B-205ENST00000611127 RGPD5Q99666 1765 aa10.47□□□□□ -0.73
FAM228B-205ENST00000611127 K7ELQ4 463 aaPredicted RBP10.47□□□□□ -0.73
FAM228B-205ENST00000611127 GRNP28799 593 aaKnown RBP10.47□□□□□ -0.73
FAM228B-205ENST00000611127 TNNT2P45379 298 aaPredicted RBP10.47□□□□□ -0.73
FAM228B-205ENST00000611127 COX20Q5RI15 118 aa10.47□□□□□ -0.73
FAM228B-205ENST00000611127 TREML1Q86YW5 311 aa10.47□□□□□ -0.73
FAM228B-205ENST00000611127 TRPM4Q8TD43 1214 aa10.47□□□□□ -0.73
FAM228B-205ENST00000611127 CLP1Q92989 425 aaKnown RBP10.47□□□□□ -0.73
FAM228B-205ENST00000611127 JPH1Q9HDC5 661 aaPredicted RBP10.47□□□□□ -0.73
FAM228B-205ENST00000611127 FAM13BQ9NYF5 915 aa10.47□□□□□ -0.73
FAM228B-205ENST00000611127 RTCBQ9Y3I0 505 aaKnown RBP10.47□□□□□ -0.73
FAM228B-205ENST00000611127 NSD2O96028 1365 aa10.47□□□□□ -0.73
FAM228B-205ENST00000611127 MYOM1P52179 1685 aa10.47□□□□□ -0.73
FAM228B-205ENST00000611127 LOC100996750A0A140TA64 210 aa10.46□□□□□ -0.73
FAM228B-205ENST00000611127 OPLAHO14841 1288 aa10.46□□□□□ -0.73
FAM228B-205ENST00000611127 RGS9O75916 674 aaPredicted RBP10.46□□□□□ -0.73
FAM228B-205ENST00000611127 RARAP10276 462 aa10.46□□□□□ -0.73
FAM228B-205ENST00000611127 PSAPL1Q6NUJ1 521 aa10.46□□□□□ -0.73
FAM228B-205ENST00000611127 DHX32Q7L7V1 743 aaKnown RBP10.46□□□□□ -0.73
FAM228B-205ENST00000611127 MORC1Q86VD1 984 aa10.46□□□□□ -0.73
FAM228B-205ENST00000611127 SYTL4Q96C24 671 aaPredicted RBP10.46□□□□□ -0.73
FAM228B-205ENST00000611127 KRTAP4-6Q9BYQ5 205 aa10.46□□□□□ -0.73
FAM228B-205ENST00000611127 STK32BQ9NY57 414 aa10.46□□□□□ -0.73
FAM228B-205ENST00000611127 KIF7Q2M1P5 1343 aa10.46□□□□□ -0.73
FAM228B-205ENST00000611127 MEGF6O75095 1541 aa10.45□□□□□ -0.74
FAM228B-205ENST00000611127 PCDH11XQ9BZA7 1347 aa10.45□□□□□ -0.74
FAM228B-205ENST00000611127 PCDH11YQ9BZA8 1340 aa10.45□□□□□ -0.74
FAM228B-205ENST00000611127 GATA4P43694 442 aa10.45□□□□□ -0.74
FAM228B-205ENST00000611127 RAC1P63000 192 aa10.45□□□□□ -0.74
FAM228B-205ENST00000611127 GPLD1P80108 840 aa10.45□□□□□ -0.74
FAM228B-205ENST00000611127 TRAPPC3LQ5T215 181 aa10.45□□□□□ -0.74
FAM228B-205ENST00000611127 TMEM164Q5U3C3 297 aa10.45□□□□□ -0.74
FAM228B-205ENST00000611127 FAM35AQ86V20 835 aa10.45□□□□□ -0.74
FAM228B-205ENST00000611127 TTC9Q92623 222 aa10.45□□□□□ -0.74
FAM228B-205ENST00000611127 WNK3Q9BYP7 1800 aa10.44□□□□□ -0.74
FAM228B-205ENST00000611127 FAM208AQ9UK61 1670 aaKnown RBP10.44□□□□□ -0.74
FAM228B-205ENST00000611127 NRLP54845 237 aa10.44□□□□□ -0.74
FAM228B-205ENST00000611127 SLC15A2Q16348 729 aa10.44□□□□□ -0.74
FAM228B-205ENST00000611127 C8orf86Q6ZUL3 223 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms