RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 ERICH4A6NGS2 130 aa22.03■■□□□ 1.12
SEMA3B-210ENST00000611067 ADORA1P30542 326 aa22.03■■□□□ 1.12
SEMA3B-210ENST00000611067 EXOSC10Q01780 885 aaKnown RBP22.03■■□□□ 1.12
SEMA3B-210ENST00000611067 VGLL2Q8N8G2 317 aa22.03■■□□□ 1.12
SEMA3B-210ENST00000611067 COL24A1Q17RW2 1714 aa22.03■■□□□ 1.12
SEMA3B-210ENST00000611067 GOLIM4O00461 696 aa22.03■■□□□ 1.12
SEMA3B-210ENST00000611067 CCP110O43303 1012 aa22.03■■□□□ 1.12
SEMA3B-210ENST00000611067 PNMA6AP0CW24 399 aaPredicted RBP22.03■■□□□ 1.12
SEMA3B-210ENST00000611067 HMGB2P26583 209 aaKnown RBP22.03■■□□□ 1.12
SEMA3B-210ENST00000611067 TPM4P67936 248 aa22.03■■□□□ 1.12
SEMA3B-210ENST00000611067 ARHGAP29Q52LW3 1261 aa22.03■■□□□ 1.12
SEMA3B-210ENST00000611067 KBTBD3Q8NAB2 608 aa22.03■■□□□ 1.12
SEMA3B-210ENST00000611067 CDC5LQ99459 802 aaKnown RBP22.03■■□□□ 1.12
SEMA3B-210ENST00000611067 A0A1B0GVL5 298 aa22.02■■□□□ 1.12
SEMA3B-210ENST00000611067 RXRBP28702 533 aa22.02■■□□□ 1.12
SEMA3B-210ENST00000611067 CCT2P78371 535 aaKnown RBP22.02■■□□□ 1.12
SEMA3B-210ENST00000611067 CHMP4CQ96CF2 233 aa22.02■■□□□ 1.12
SEMA3B-210ENST00000611067 PHLPP2Q6ZVD8 1323 aa22.02■■□□□ 1.12
SEMA3B-210ENST00000611067 ABCC12Q96J65 1359 aa22.02■■□□□ 1.12
SEMA3B-210ENST00000611067 SPEF2Q9C093 1822 aa22.02■■□□□ 1.11
SEMA3B-210ENST00000611067 CHGBP05060 677 aa22.01■■□□□ 1.11
SEMA3B-210ENST00000611067 NDUFA8P51970 172 aa22.01■■□□□ 1.11
SEMA3B-210ENST00000611067 ETF1P62495 437 aaKnown RBP22.01■■□□□ 1.11
SEMA3B-210ENST00000611067 IRX5P78411 483 aaPredicted RBP22.01■■□□□ 1.11
SEMA3B-210ENST00000611067 TPTE2Q6XPS3 522 aa22.01■■□□□ 1.11
SEMA3B-210ENST00000611067 ARGLU1Q9NWB6 273 aaPredicted RBP22.01■■□□□ 1.11
SEMA3B-210ENST00000611067 ZRANB2O95218 330 aaKnown RBP eCLIP22.01■■□□□ 1.11
SEMA3B-210ENST00000611067 PUM3Q15397 648 aaKnown RBP22.01■■□□□ 1.11
SEMA3B-210ENST00000611067 UBR3Q6ZT12 1888 aa22■■□□□ 1.11
SEMA3B-210ENST00000611067 CARMIL3Q8ND23 1372 aa22■■□□□ 1.11
SEMA3B-210ENST00000611067 NEDD4P46934 1319 aa22■■□□□ 1.11
SEMA3B-210ENST00000611067 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22■■□□□ 1.11
SEMA3B-210ENST00000611067 PLA2G4AP47712 749 aa22■■□□□ 1.11
SEMA3B-210ENST00000611067 GUCY1B3Q02153 619 aa22■■□□□ 1.11
SEMA3B-210ENST00000611067 SF3B3Q15393 1217 aaKnown RBP22■■□□□ 1.11
SEMA3B-210ENST00000611067 LINC00301Q8NCQ3 95 aa22■■□□□ 1.11
SEMA3B-210ENST00000611067 ZNF274Q96GC6 653 aaPredicted RBP22■■□□□ 1.11
SEMA3B-210ENST00000611067 SLC10A5Q5PT55 438 aa22■■□□□ 1.11
SEMA3B-210ENST00000611067 SRRTQ9BXP5 876 aaKnown RBP22■■□□□ 1.11
SEMA3B-210ENST00000611067 ZBTB22O15209 634 aa21.99■■□□□ 1.11
SEMA3B-210ENST00000611067 NLRP12P59046 1061 aa21.99■■□□□ 1.11
SEMA3B-210ENST00000611067 NCAPHQ15003 741 aa21.99■■□□□ 1.11
SEMA3B-210ENST00000611067 TICAM2Q86XR7 235 aa21.99■■□□□ 1.11
SEMA3B-210ENST00000611067 HOMER1Q86YM7 354 aa21.99■■□□□ 1.11
SEMA3B-210ENST00000611067 KCNG4Q8TDN1 519 aa21.99■■□□□ 1.11
SEMA3B-210ENST00000611067 LPIN2Q92539 896 aa21.99■■□□□ 1.11
SEMA3B-210ENST00000611067 UBXN4Q92575 508 aa21.99■■□□□ 1.11
SEMA3B-210ENST00000611067 DSCC1Q9BVC3 393 aa21.99■■□□□ 1.11
SEMA3B-210ENST00000611067 NCOA5Q9HCD5 579 aaKnown RBP21.99■■□□□ 1.11
SEMA3B-210ENST00000611067 ORC3Q9UBD5 711 aaPredicted RBP21.99■■□□□ 1.11
SEMA3B-210ENST00000611067 PDIA3P30101 505 aaKnown RBP21.99■■□□□ 1.11
SEMA3B-210ENST00000611067 FKBP4Q02790 459 aaKnown RBP eCLIP21.99■■□□□ 1.11
SEMA3B-210ENST00000611067 TMCO3Q6UWJ1 677 aa21.99■■□□□ 1.11
SEMA3B-210ENST00000611067 HELBQ8NG08 1087 aaPredicted RBP21.99■■□□□ 1.11
SEMA3B-210ENST00000611067 CASZ1Q86V15 1759 aa21.98■■□□□ 1.11
SEMA3B-210ENST00000611067 TXNRD1Q16881 649 aa21.98■■□□□ 1.11
SEMA3B-210ENST00000611067 NLRP3Q96P20 1036 aa21.98■■□□□ 1.11
SEMA3B-210ENST00000611067 TULP2O00295 520 aa21.97■■□□□ 1.11
SEMA3B-210ENST00000611067 YEATS4O95619 227 aa21.97■■□□□ 1.11
SEMA3B-210ENST00000611067 SLC3A2P08195 630 aaKnown RBP21.97■■□□□ 1.11
SEMA3B-210ENST00000611067 SF3A1Q15459 793 aaKnown RBP21.97■■□□□ 1.11
SEMA3B-210ENST00000611067 ANKRD18AQ8IVF6 992 aa21.97■■□□□ 1.11
SEMA3B-210ENST00000611067 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.97■■□□□ 1.11
SEMA3B-210ENST00000611067 DNAI1Q9UI46 699 aa21.97■■□□□ 1.11
SEMA3B-210ENST00000611067 SLC5A1P13866 664 aa21.97■■□□□ 1.11
SEMA3B-210ENST00000611067 STK38Q15208 465 aa21.97■■□□□ 1.11
SEMA3B-210ENST00000611067 C3orf67Q6ZVT6 689 aa21.97■■□□□ 1.11
SEMA3B-210ENST00000611067 HELLSQ9NRZ9 838 aa21.97■■□□□ 1.11
SEMA3B-210ENST00000611067 POLR3EQ9NVU0 708 aa21.97■■□□□ 1.11
SEMA3B-210ENST00000611067 IKBKBO14920 756 aa21.96■■□□□ 1.11
SEMA3B-210ENST00000611067 FDPSP14324 419 aaKnown RBP21.96■■□□□ 1.11
SEMA3B-210ENST00000611067 LRRFIP1Q32MZ4 808 aaKnown RBP21.96■■□□□ 1.11
SEMA3B-210ENST00000611067 ATP8B1O43520 1251 aa21.96■■□□□ 1.11
SEMA3B-210ENST00000611067 FANCCQ00597 558 aa21.96■■□□□ 1.11
SEMA3B-210ENST00000611067 TRIM65Q6PJ69 517 aa21.96■■□□□ 1.11
SEMA3B-210ENST00000611067 CLIC4Q9Y696 253 aa21.96■■□□□ 1.11
SEMA3B-210ENST00000611067 E7EWF7 191 aa21.95■■□□□ 1.1
SEMA3B-210ENST00000611067 TPM1P09493 284 aa21.95■■□□□ 1.1
SEMA3B-210ENST00000611067 CDK11BP21127 795 aaKnown RBP21.95■■□□□ 1.1
SEMA3B-210ENST00000611067 FGFR2P21802 821 aa21.95■■□□□ 1.1
SEMA3B-210ENST00000611067 TEX35Q5T0J7 233 aa21.95■■□□□ 1.1
SEMA3B-210ENST00000611067 NAP1L2Q9ULW6 460 aaPredicted RBP21.95■■□□□ 1.1
SEMA3B-210ENST00000611067 ARAP2Q8WZ64 1704 aa21.95■■□□□ 1.1
SEMA3B-210ENST00000611067 TADA3O75528 432 aa21.95■■□□□ 1.1
SEMA3B-210ENST00000611067 ZNF202O95125 648 aa21.95■■□□□ 1.1
SEMA3B-210ENST00000611067 SLC20A2Q08357 652 aa21.95■■□□□ 1.1
SEMA3B-210ENST00000611067 MNS1Q8NEH6 495 aa21.95■■□□□ 1.1
SEMA3B-210ENST00000611067 ZNF512BQ96KM6 892 aaPredicted RBP21.95■■□□□ 1.1
SEMA3B-210ENST00000611067 EFCAB8A8MWE9 144 aa21.94■■□□□ 1.1
SEMA3B-210ENST00000611067 SPTLC2O15270 562 aa21.94■■□□□ 1.1
SEMA3B-210ENST00000611067 NFIXQ14938 502 aa21.94■■□□□ 1.1
SEMA3B-210ENST00000611067 FBXL16Q8N461 479 aa21.94■■□□□ 1.1
SEMA3B-210ENST00000611067 TMX1Q9H3N1 280 aa21.94■■□□□ 1.1
SEMA3B-210ENST00000611067 BIN1O00499 593 aa21.94■■□□□ 1.1
SEMA3B-210ENST00000611067 PPFIA3O75145 1194 aa21.94■■□□□ 1.1
SEMA3B-210ENST00000611067 APBA3O96018 575 aa21.94■■□□□ 1.1
SEMA3B-210ENST00000611067 CHRNDQ07001 517 aa21.94■■□□□ 1.1
SEMA3B-210ENST00000611067 SCARF1Q14162 830 aa21.94■■□□□ 1.1
SEMA3B-210ENST00000611067 CCDC102BQ68D86 513 aa21.94■■□□□ 1.1
SEMA3B-210ENST00000611067 PLSCR1O15162 318 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms