RNA–Protein interactions for RNA: ENST00000610543.4

CNTFR-204, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNTFR, Length 1,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-204ENST00000610543 ANKRD2Q9GZV1 360 aa17.71■□□□□ 0.43
CNTFR-204ENST00000610543 CCNL1Q9UK58 526 aaPredicted RBP17.71■□□□□ 0.43
CNTFR-204ENST00000610543 USP21Q9UK80 565 aa17.71■□□□□ 0.43
CNTFR-204ENST00000610543 PDS5AQ29RF7 1337 aaKnown RBP17.71■□□□□ 0.42
CNTFR-204ENST00000610543 TAF1P21675 1872 aa17.7■□□□□ 0.42
CNTFR-204ENST00000610543 CACNA1SQ13698 1873 aa17.7■□□□□ 0.42
CNTFR-204ENST00000610543 SPTLC2O15270 562 aa17.7■□□□□ 0.42
CNTFR-204ENST00000610543 PPARAQ07869 468 aa17.7■□□□□ 0.42
CNTFR-204ENST00000610543 SSRP1Q08945 709 aaKnown RBP17.7■□□□□ 0.42
CNTFR-204ENST00000610543 SNW1Q13573 536 aaKnown RBP17.7■□□□□ 0.42
CNTFR-204ENST00000610543 TPTE2Q6XPS3 522 aa17.7■□□□□ 0.42
CNTFR-204ENST00000610543 LUZP1Q86V48 1076 aa17.7■□□□□ 0.42
CNTFR-204ENST00000610543 ENGASEQ8NFI3 743 aa17.7■□□□□ 0.42
CNTFR-204ENST00000610543 TDRD7Q8NHU6 1098 aaKnown RBP17.7■□□□□ 0.42
CNTFR-204ENST00000610543 CELF1Q92879 486 aaKnown RBP17.7■□□□□ 0.42
CNTFR-204ENST00000610543 CCDC196A0A1B0GTZ2 297 aa17.7■□□□□ 0.42
CNTFR-204ENST00000610543 RPS8P62241 208 aaKnown RBP17.7■□□□□ 0.42
CNTFR-204ENST00000610543 ANO1Q5XXA6 986 aa17.7■□□□□ 0.42
CNTFR-204ENST00000610543 CCDC144CPQ8IYA2 1237 aa17.7■□□□□ 0.42
CNTFR-204ENST00000610543 NKX2-3Q8TAU0 364 aa17.7■□□□□ 0.42
CNTFR-204ENST00000610543 ANAPC4Q9UJX5 808 aa17.7■□□□□ 0.42
CNTFR-204ENST00000610543 CLIC4Q9Y696 253 aa17.7■□□□□ 0.42
CNTFR-204ENST00000610543 MAST2Q6P0Q8 1798 aa17.69■□□□□ 0.42
CNTFR-204ENST00000610543 LY75O60449 1722 aa17.69■□□□□ 0.42
CNTFR-204ENST00000610543 NTRK3Q16288 839 aa17.69■□□□□ 0.42
CNTFR-204ENST00000610543 KRT40Q6A162 431 aa17.69■□□□□ 0.42
CNTFR-204ENST00000610543 TRIM22Q8IYM9 498 aa17.69■□□□□ 0.42
CNTFR-204ENST00000610543 JMYQ8N9B5 988 aa17.69■□□□□ 0.42
CNTFR-204ENST00000610543 ESR2Q92731 530 aa17.69■□□□□ 0.42
CNTFR-204ENST00000610543 PHKBQ93100 1093 aa17.69■□□□□ 0.42
CNTFR-204ENST00000610543 FAM84BQ96KN1 310 aaPredicted RBP17.69■□□□□ 0.42
CNTFR-204ENST00000610543 UBAC1Q9BSL1 405 aa17.69■□□□□ 0.42
CNTFR-204ENST00000610543 DNAJC25Q9H1X3 360 aa17.69■□□□□ 0.42
CNTFR-204ENST00000610543 SENP2Q9HC62 589 aa17.69■□□□□ 0.42
CNTFR-204ENST00000610543 TAF1LQ8IZX4 1826 aa17.69■□□□□ 0.42
CNTFR-204ENST00000610543 KIF28PB7ZC32 967 aa17.68■□□□□ 0.42
CNTFR-204ENST00000610543 FMNL1O95466 1100 aaPredicted RBP17.68■□□□□ 0.42
CNTFR-204ENST00000610543 IFNAR1P17181 557 aa17.68■□□□□ 0.42
CNTFR-204ENST00000610543 TMED8Q6PL24 325 aaPredicted RBP17.68■□□□□ 0.42
CNTFR-204ENST00000610543 INCENPQ9NQS7 918 aa17.68■□□□□ 0.42
CNTFR-204ENST00000610543 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.68■□□□□ 0.42
CNTFR-204ENST00000610543 SRP68Q9UHB9 627 aaKnown RBP17.68■□□□□ 0.42
CNTFR-204ENST00000610543 GOLGA6L19H0YKK7 550 aa17.68■□□□□ 0.42
CNTFR-204ENST00000610543 PCP11498 1178 aaKnown RBP17.68■□□□□ 0.42
CNTFR-204ENST00000610543 RTN1Q16799 776 aa17.68■□□□□ 0.42
CNTFR-204ENST00000610543 ADGRA1Q86SQ6 560 aa17.68■□□□□ 0.42
CNTFR-204ENST00000610543 FMR1NBQ8N0W7 255 aaPredicted RBP17.68■□□□□ 0.42
CNTFR-204ENST00000610543 MYL10Q9BUA6 226 aa17.68■□□□□ 0.42
CNTFR-204ENST00000610543 BRIP1Q9BX63 1249 aa17.68■□□□□ 0.42
CNTFR-204ENST00000610543 SLC26A6Q9BXS9 759 aa17.68■□□□□ 0.42
CNTFR-204ENST00000610543 GJB4Q9NTQ9 266 aa17.68■□□□□ 0.42
CNTFR-204ENST00000610543 ANO10Q9NW15 660 aa17.68■□□□□ 0.42
CNTFR-204ENST00000610543 DUOX1Q9NRD9 1551 aa17.67■□□□□ 0.42
CNTFR-204ENST00000610543 NPHP1O15259 732 aa17.67■□□□□ 0.42
CNTFR-204ENST00000610543 RANBP6O60518 1105 aaKnown RBP17.67■□□□□ 0.42
CNTFR-204ENST00000610543 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.67■□□□□ 0.42
CNTFR-204ENST00000610543 FBXO33Q7Z6M2 555 aa17.67■□□□□ 0.42
CNTFR-204ENST00000610543 SDR42E1Q8WUS8 393 aa17.67■□□□□ 0.42
CNTFR-204ENST00000610543 RIOK1Q9BRS2 568 aaKnown RBP17.67■□□□□ 0.42
CNTFR-204ENST00000610543 FAM217BQ9NTX9 383 aaPredicted RBP17.67■□□□□ 0.42
CNTFR-204ENST00000610543 AFF2P51816 1311 aa17.67■□□□□ 0.42
CNTFR-204ENST00000610543 MINDY4BA8MYZ0 360 aa17.66■□□□□ 0.42
CNTFR-204ENST00000610543 AP5Z1O43299 807 aa17.66■□□□□ 0.42
CNTFR-204ENST00000610543 PPP2R5BQ15173 497 aa17.66■□□□□ 0.42
CNTFR-204ENST00000610543 ZRSR1Q15695 479 aaKnown RBP17.66■□□□□ 0.42
CNTFR-204ENST00000610543 AIFM3Q96NN9 605 aa17.66■□□□□ 0.42
CNTFR-204ENST00000610543 SDF4Q9BRK5 362 aa17.66■□□□□ 0.42
CNTFR-204ENST00000610543 TACC3Q9Y6A5 838 aa17.66■□□□□ 0.42
CNTFR-204ENST00000610543 SLC39A14Q15043 492 aa17.66■□□□□ 0.42
CNTFR-204ENST00000610543 SAFBQ15424 915 aaKnown RBP eCLIP17.66■□□□□ 0.42
CNTFR-204ENST00000610543 PTF1AQ7RTS3 328 aa17.66■□□□□ 0.42
CNTFR-204ENST00000610543 NAT10Q9H0A0 1025 aaKnown RBP17.66■□□□□ 0.42
CNTFR-204ENST00000610543 A0A1B0GVL5 298 aa17.65■□□□□ 0.42
CNTFR-204ENST00000610543 PPP6R2O75170 966 aa17.65■□□□□ 0.42
CNTFR-204ENST00000610543 U2AF2P26368 475 aaKnown RBP eCLIP17.65■□□□□ 0.42
CNTFR-204ENST00000610543 HIBADHP31937 336 aaKnown RBP17.65■□□□□ 0.42
CNTFR-204ENST00000610543 NDUFA8P51970 172 aa17.65■□□□□ 0.42
CNTFR-204ENST00000610543 CEP57L1Q8IYX8 460 aa17.65■□□□□ 0.42
CNTFR-204ENST00000610543 PIBF1Q8WXW3 757 aa17.65■□□□□ 0.42
CNTFR-204ENST00000610543 ZKSCAN3Q9BRR0 538 aa17.65■□□□□ 0.42
CNTFR-204ENST00000610543 DEXIO95424 95 aa17.64■□□□□ 0.42
CNTFR-204ENST00000610543 TPM2P07951 284 aa17.64■□□□□ 0.42
CNTFR-204ENST00000610543 CMA1P23946 247 aa17.64■□□□□ 0.42
CNTFR-204ENST00000610543 TERF1P54274 439 aa17.64■□□□□ 0.42
CNTFR-204ENST00000610543 ZNF654Q8IZM8 581 aa17.64■□□□□ 0.42
CNTFR-204ENST00000610543 TRIM5Q9C035 493 aa17.64■□□□□ 0.42
CNTFR-204ENST00000610543 SRCAPQ6ZRS2 3230 aa17.64■□□□□ 0.42
CNTFR-204ENST00000610543 LAMB1P07942 1786 aa17.64■□□□□ 0.41
CNTFR-204ENST00000610543 BECN2A8MW95 431 aa17.64■□□□□ 0.41
CNTFR-204ENST00000610543 ZBTB22O15209 634 aa17.64■□□□□ 0.41
CNTFR-204ENST00000610543 RFC4P35249 363 aa17.64■□□□□ 0.41
CNTFR-204ENST00000610543 SMIM5Q71RC9 77 aa17.64■□□□□ 0.41
CNTFR-204ENST00000610543 STK11IPQ8N1F8 1099 aa17.64■□□□□ 0.41
CNTFR-204ENST00000610543 ARHGEF1Q92888 912 aaKnown RBP17.64■□□□□ 0.41
CNTFR-204ENST00000610543 TTC12Q9H892 705 aaPredicted RBP17.64■□□□□ 0.41
CNTFR-204ENST00000610543 CCDC88AQ3V6T2 1871 aa17.64■□□□□ 0.41
CNTFR-204ENST00000610543 TNKSO95271 1327 aa17.64■□□□□ 0.41
CNTFR-204ENST00000610543 RXRBP28702 533 aa17.63■□□□□ 0.41
CNTFR-204ENST00000610543 IQCA1Q86XH1 822 aa17.63■□□□□ 0.41
CNTFR-204ENST00000610543 PLA2G4DQ86XP0 818 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms