RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 A0A1W2PPZ6 126 aa7.25□□□□□ -1.25
SMCHD1-213ENST00000609587 METTL12A8MUP2 240 aa7.25□□□□□ -1.25
SMCHD1-213ENST00000609587 CD8BP10966 210 aa7.25□□□□□ -1.25
SMCHD1-213ENST00000609587 CD96P40200 585 aa7.25□□□□□ -1.25
SMCHD1-213ENST00000609587 PLD6Q8N2A8 252 aaKnown RBP7.25□□□□□ -1.25
SMCHD1-213ENST00000609587 EHD4Q9H223 541 aa7.25□□□□□ -1.25
SMCHD1-213ENST00000609587 WWC3Q9ULE0 1092 aa7.25□□□□□ -1.25
SMCHD1-213ENST00000609587 U3KQE9 123 aa7.25□□□□□ -1.25
SMCHD1-213ENST00000609587 PRPF40AO75400 957 aaKnown RBP7.24□□□□□ -1.25
SMCHD1-213ENST00000609587 MAOBP27338 520 aa7.24□□□□□ -1.25
SMCHD1-213ENST00000609587 GRIA4P48058 902 aa7.24□□□□□ -1.25
SMCHD1-213ENST00000609587 AKAP4Q5JQC9 854 aa7.24□□□□□ -1.25
SMCHD1-213ENST00000609587 ALG1LQ6GMV1 187 aa7.24□□□□□ -1.25
SMCHD1-213ENST00000609587 PRPF40BQ6NWY9 871 aaKnown RBP7.24□□□□□ -1.25
SMCHD1-213ENST00000609587 OGFOD3Q6PK18 319 aa7.24□□□□□ -1.25
SMCHD1-213ENST00000609587 DYMQ7RTS9 669 aa7.24□□□□□ -1.25
SMCHD1-213ENST00000609587 FAM181AQ8N9Y4 354 aa7.24□□□□□ -1.25
SMCHD1-213ENST00000609587 SETDB2Q96T68 719 aa7.24□□□□□ -1.25
SMCHD1-213ENST00000609587 GSX1Q9H4S2 264 aaPredicted RBP7.24□□□□□ -1.25
SMCHD1-213ENST00000609587 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.24□□□□□ -1.25
SMCHD1-213ENST00000609587 AP4E1Q9UPM8 1137 aa7.24□□□□□ -1.25
SMCHD1-213ENST00000609587 EIF4EBP3O60516 100 aaPredicted RBP7.23□□□□□ -1.25
SMCHD1-213ENST00000609587 ITPKAP23677 461 aa7.23□□□□□ -1.25
SMCHD1-213ENST00000609587 PTPN12Q05209 780 aaKnown RBP7.23□□□□□ -1.25
SMCHD1-213ENST00000609587 EPS8L3Q8TE67 593 aaKnown RBP7.23□□□□□ -1.25
SMCHD1-213ENST00000609587 SLC38A3Q99624 504 aa7.23□□□□□ -1.25
SMCHD1-213ENST00000609587 BCL11AQ9H165 835 aa7.23□□□□□ -1.25
SMCHD1-213ENST00000609587 CLEC4MQ9H2X3 399 aaPredicted RBP7.23□□□□□ -1.25
SMCHD1-213ENST00000609587 TRAK1Q9UPV9 953 aa7.23□□□□□ -1.25
SMCHD1-213ENST00000609587 DAGLAQ9Y4D2 1042 aa7.23□□□□□ -1.25
SMCHD1-213ENST00000609587 UNCXA6NJT0 531 aa7.22□□□□□ -1.25
SMCHD1-213ENST00000609587 GADD45BO75293 160 aaPredicted RBP7.22□□□□□ -1.25
SMCHD1-213ENST00000609587 ECEL1O95672 775 aa7.22□□□□□ -1.25
SMCHD1-213ENST00000609587 XPCQ01831 940 aaPredicted RBP7.22□□□□□ -1.25
SMCHD1-213ENST00000609587 GRM2Q14416 872 aa7.22□□□□□ -1.25
SMCHD1-213ENST00000609587 SPRED3Q2MJR0 410 aa7.22□□□□□ -1.25
SMCHD1-213ENST00000609587 FBF1Q8TES7 1133 aa7.22□□□□□ -1.25
SMCHD1-213ENST00000609587 DUSP9Q99956 384 aaKnown RBP7.22□□□□□ -1.25
SMCHD1-213ENST00000609587 KRTAP9-3Q9BYQ3 159 aa7.22□□□□□ -1.25
SMCHD1-213ENST00000609587 NLRP2Q9NX02 1062 aa7.22□□□□□ -1.25
SMCHD1-213ENST00000609587 E9PSI1 815 aa7.21□□□□□ -1.26
SMCHD1-213ENST00000609587 LCNL1Q6ZST4 164 aa7.21□□□□□ -1.26
SMCHD1-213ENST00000609587 C1QL4Q86Z23 238 aa7.21□□□□□ -1.26
SMCHD1-213ENST00000609587 LGR6Q9HBX8 967 aa7.21□□□□□ -1.26
SMCHD1-213ENST00000609587 ABCB6Q9NP58 842 aa7.21□□□□□ -1.26
SMCHD1-213ENST00000609587 PARP2Q9UGN5 583 aa7.21□□□□□ -1.26
SMCHD1-213ENST00000609587 TMEM238LA0A1B0GVL6 79 aa7.2□□□□□ -1.26
SMCHD1-213ENST00000609587 ASPAP45381 313 aa7.2□□□□□ -1.26
SMCHD1-213ENST00000609587 PCDH1Q08174 1060 aa7.2□□□□□ -1.26
SMCHD1-213ENST00000609587 ZNF423Q2M1K9 1284 aa7.2□□□□□ -1.26
SMCHD1-213ENST00000609587 RPS26P11Q5JNZ5 115 aaPredicted RBP7.2□□□□□ -1.26
SMCHD1-213ENST00000609587 BHLHE22Q8NFJ8 381 aaPredicted RBP7.2□□□□□ -1.26
SMCHD1-213ENST00000609587 NETO1Q8TDF5 533 aa7.2□□□□□ -1.26
SMCHD1-213ENST00000609587 MRRFQ96E11 262 aaKnown RBP7.2□□□□□ -1.26
SMCHD1-213ENST00000609587 FAM84AQ96KN4 292 aa7.2□□□□□ -1.26
SMCHD1-213ENST00000609587 TRIM56Q9BRZ2 755 aaKnown RBP7.2□□□□□ -1.26
SMCHD1-213ENST00000609587 ZNF576Q9H609 170 aa7.2□□□□□ -1.26
SMCHD1-213ENST00000609587 NCANO14594 1321 aa7.2□□□□□ -1.26
SMCHD1-213ENST00000609587 B3GALT4O96024 378 aa7.19□□□□□ -1.26
SMCHD1-213ENST00000609587 PSMD2Q13200 908 aa7.19□□□□□ -1.26
SMCHD1-213ENST00000609587 CDK5R2Q13319 367 aa7.19□□□□□ -1.26
SMCHD1-213ENST00000609587 POU4F3Q15319 338 aa7.19□□□□□ -1.26
SMCHD1-213ENST00000609587 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.19□□□□□ -1.26
SMCHD1-213ENST00000609587 PI16Q6UXB8 463 aa7.19□□□□□ -1.26
SMCHD1-213ENST00000609587 ZFYVE1Q9HBF4 777 aa7.19□□□□□ -1.26
SMCHD1-213ENST00000609587 RNF19AQ9NV58 838 aa7.19□□□□□ -1.26
SMCHD1-213ENST00000609587 PPP4R2Q9NY27 417 aa7.19□□□□□ -1.26
SMCHD1-213ENST00000609587 LRRC10BA6NIK2 292 aa7.18□□□□□ -1.26
SMCHD1-213ENST00000609587 FAM87AP0C7U9 286 aa7.18□□□□□ -1.26
SMCHD1-213ENST00000609587 CFPP27918 469 aa7.18□□□□□ -1.26
SMCHD1-213ENST00000609587 GNA15P30679 374 aa7.18□□□□□ -1.26
SMCHD1-213ENST00000609587 CYP27C1Q4G0S4 372 aa7.18□□□□□ -1.26
SMCHD1-213ENST00000609587 HP1BP3Q5SSJ5 553 aaPredicted RBP7.18□□□□□ -1.26
SMCHD1-213ENST00000609587 LILRA6Q6PI73 481 aa7.18□□□□□ -1.26
SMCHD1-213ENST00000609587 FLAD1Q8NFF5 587 aa7.18□□□□□ -1.26
SMCHD1-213ENST00000609587 PI4K2BQ8TCG2 481 aa7.18□□□□□ -1.26
SMCHD1-213ENST00000609587 FRMD6Q96NE9 622 aa7.18□□□□□ -1.26
SMCHD1-213ENST00000609587 BCO2Q9BYV7 579 aa7.18□□□□□ -1.26
SMCHD1-213ENST00000609587 SPG7Q9UQ90 795 aa7.18□□□□□ -1.26
SMCHD1-213ENST00000609587 CYP11A1P05108 521 aa7.17□□□□□ -1.26
SMCHD1-213ENST00000609587 XRCC5P13010 732 aaKnown RBP7.17□□□□□ -1.26
SMCHD1-213ENST00000609587 ITGAEP38570 1179 aa7.17□□□□□ -1.26
SMCHD1-213ENST00000609587 DAB2P98082 770 aa7.17□□□□□ -1.26
SMCHD1-213ENST00000609587 PRKCQQ04759 706 aa7.17□□□□□ -1.26
SMCHD1-213ENST00000609587 TMC4Q7Z404 712 aa7.17□□□□□ -1.26
SMCHD1-213ENST00000609587 DDX54Q8TDD1 881 aaKnown RBP7.17□□□□□ -1.26
SMCHD1-213ENST00000609587 FAM161BQ96MY7 647 aa7.17□□□□□ -1.26
SMCHD1-213ENST00000609587 SRCIN1Q9C0H9 1055 aa7.17□□□□□ -1.26
SMCHD1-213ENST00000609587 MRS2Q9HD23 443 aa7.17□□□□□ -1.26
SMCHD1-213ENST00000609587 CRIM1Q9NZV1 1036 aa7.17□□□□□ -1.26
SMCHD1-213ENST00000609587 KIAA1522Q9P206 1035 aaPredicted RBP7.17□□□□□ -1.26
SMCHD1-213ENST00000609587 VAV3Q9UKW4 847 aa7.17□□□□□ -1.26
SMCHD1-213ENST00000609587 ZNF503-AS2A6NEH8 195 aa7.16□□□□□ -1.26
SMCHD1-213ENST00000609587 PRRG2O14669 202 aa7.16□□□□□ -1.26
SMCHD1-213ENST00000609587 GIPC1O14908 333 aa7.16□□□□□ -1.26
SMCHD1-213ENST00000609587 TSPAN15O95858 294 aa7.16□□□□□ -1.26
SMCHD1-213ENST00000609587 NXPE4Q6UWF7 544 aa7.16□□□□□ -1.26
SMCHD1-213ENST00000609587 ZSWIM9Q86XI8 627 aa7.16□□□□□ -1.26
SMCHD1-213ENST00000609587 TOX2Q96NM4 488 aa7.16□□□□□ -1.26
SMCHD1-213ENST00000609587 WDR18Q9BV38 432 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms