RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 GJA5P36382 358 aa18.44■□□□□ 0.54
LMBR1-220ENST00000609081 PPATQ06203 517 aa18.44■□□□□ 0.54
LMBR1-220ENST00000609081 ZSCAN29Q8IWY8 852 aaPredicted RBP18.44■□□□□ 0.54
LMBR1-220ENST00000609081 TLR7Q9NYK1 1049 aaKnown RBP18.44■□□□□ 0.54
LMBR1-220ENST00000609081 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.44■□□□□ 0.54
LMBR1-220ENST00000609081 SNCAIPQ9Y6H5 919 aa18.44■□□□□ 0.54
LMBR1-220ENST00000609081 GPR25O00155 361 aa18.43■□□□□ 0.54
LMBR1-220ENST00000609081 ZAP70P43403 619 aa18.43■□□□□ 0.54
LMBR1-220ENST00000609081 MAP3K10Q02779 954 aa18.43■□□□□ 0.54
LMBR1-220ENST00000609081 PPIL2Q13356 520 aa18.43■□□□□ 0.54
LMBR1-220ENST00000609081 NOL9Q5SY16 702 aaKnown RBP18.43■□□□□ 0.54
LMBR1-220ENST00000609081 C20orf194Q5TEA3 1177 aa18.43■□□□□ 0.54
LMBR1-220ENST00000609081 MIGA2Q7L4E1 593 aa18.43■□□□□ 0.54
LMBR1-220ENST00000609081 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.43■□□□□ 0.54
LMBR1-220ENST00000609081 OTUD5Q96G74 571 aa18.43■□□□□ 0.54
LMBR1-220ENST00000609081 ABHD8Q96I13 439 aa18.43■□□□□ 0.54
LMBR1-220ENST00000609081 MS4A4AQ96JQ5 239 aa18.43■□□□□ 0.54
LMBR1-220ENST00000609081 ZCCHC17Q9NP64 241 aaKnown RBP18.43■□□□□ 0.54
LMBR1-220ENST00000609081 IGF2BP3O00425 579 aaKnown RBP eCLIP18.42■□□□□ 0.54
LMBR1-220ENST00000609081 TBC1D8O95759 1140 aa18.42■□□□□ 0.54
LMBR1-220ENST00000609081 IFIT2P09913 472 aaKnown RBP18.42■□□□□ 0.54
LMBR1-220ENST00000609081 CETPP11597 493 aa18.42■□□□□ 0.54
LMBR1-220ENST00000609081 PPP4CP60510 307 aa18.42■□□□□ 0.54
LMBR1-220ENST00000609081 DGKZQ13574 1117 aa18.42■□□□□ 0.54
LMBR1-220ENST00000609081 TTF1Q15361 905 aaPredicted RBP18.42■□□□□ 0.54
LMBR1-220ENST00000609081 ZKSCAN4Q969J2 545 aaPredicted RBP18.42■□□□□ 0.54
LMBR1-220ENST00000609081 IL1RAPL2Q9NP60 686 aa18.42■□□□□ 0.54
LMBR1-220ENST00000609081 MYO5AQ9Y4I1 1855 aaKnown RBP18.41■□□□□ 0.54
LMBR1-220ENST00000609081 TBC1D12O60347 775 aa18.41■□□□□ 0.54
LMBR1-220ENST00000609081 MAP3K12Q12852 859 aa18.41■□□□□ 0.54
LMBR1-220ENST00000609081 SNAPC2Q13487 334 aa18.41■□□□□ 0.54
LMBR1-220ENST00000609081 PICALMQ13492 652 aa18.41■□□□□ 0.54
LMBR1-220ENST00000609081 PKN2Q16513 984 aaKnown RBP18.41■□□□□ 0.54
LMBR1-220ENST00000609081 CTU1Q7Z7A3 348 aaKnown RBP18.41■□□□□ 0.54
LMBR1-220ENST00000609081 TEX11Q8IYF3 940 aa18.41■□□□□ 0.54
LMBR1-220ENST00000609081 ZNF296Q8WUU4 475 aaPredicted RBP18.41■□□□□ 0.54
LMBR1-220ENST00000609081 MCOLN1Q9GZU1 580 aa18.41■□□□□ 0.54
LMBR1-220ENST00000609081 CCL15-CCL14A0A0B4J2E2 113 aa18.4■□□□□ 0.54
LMBR1-220ENST00000609081 FKTNO75072 461 aa18.4■□□□□ 0.54
LMBR1-220ENST00000609081 CCL15Q16663 113 aa18.4■□□□□ 0.54
LMBR1-220ENST00000609081 ZFPM1Q8IX07 1006 aa18.4■□□□□ 0.54
LMBR1-220ENST00000609081 DHX36Q9H2U1 1008 aaKnown RBP18.4■□□□□ 0.54
LMBR1-220ENST00000609081 DDX4Q9NQI0 724 aaKnown RBP18.4■□□□□ 0.54
LMBR1-220ENST00000609081 PIH1D3Q9NQM4 214 aaKnown RBP18.4■□□□□ 0.54
LMBR1-220ENST00000609081 DDTLA6NHG4 134 aaPredicted RBP18.39■□□□□ 0.53
LMBR1-220ENST00000609081 IDH1O75874 414 aaKnown RBP18.39■□□□□ 0.53
LMBR1-220ENST00000609081 INPP5BP32019 993 aa18.39■□□□□ 0.53
LMBR1-220ENST00000609081 SH3BP5LQ7L8J4 393 aa18.39■□□□□ 0.53
LMBR1-220ENST00000609081 BRI3BPQ8WY22 251 aa18.39■□□□□ 0.53
LMBR1-220ENST00000609081 LRRCC1Q9C099 1032 aa18.39■□□□□ 0.53
LMBR1-220ENST00000609081 OSBPL5Q9H0X9 879 aaPredicted RBP18.39■□□□□ 0.53
LMBR1-220ENST00000609081 FOCADQ5VW36 1801 aa18.39■□□□□ 0.53
LMBR1-220ENST00000609081 PHF20L1A8MW92 1017 aa18.38■□□□□ 0.53
LMBR1-220ENST00000609081 IRF6O14896 467 aa18.38■□□□□ 0.53
LMBR1-220ENST00000609081 CTNND1O60716 968 aaKnown RBP18.38■□□□□ 0.53
LMBR1-220ENST00000609081 CAPN15O75808 1086 aa18.38■□□□□ 0.53
LMBR1-220ENST00000609081 SCYL3Q8IZE3 742 aa18.38■□□□□ 0.53
LMBR1-220ENST00000609081 CNKSR2Q8WXI2 1034 aa18.38■□□□□ 0.53
LMBR1-220ENST00000609081 PTPN18Q99952 460 aa18.38■□□□□ 0.53
LMBR1-220ENST00000609081 PICK1Q9NRD5 415 aa18.38■□□□□ 0.53
LMBR1-220ENST00000609081 AATFQ9NY61 560 aaKnown RBP eCLIP18.38■□□□□ 0.53
LMBR1-220ENST00000609081 HERC5Q9UII4 1024 aaKnown RBP18.38■□□□□ 0.53
LMBR1-220ENST00000609081 KCNH4Q9UQ05 1017 aa18.38■□□□□ 0.53
LMBR1-220ENST00000609081 CDK5RAP2Q96SN8 1893 aa18.37■□□□□ 0.53
LMBR1-220ENST00000609081 APBB1O00213 710 aa18.37■□□□□ 0.53
LMBR1-220ENST00000609081 CYP7A1P22680 504 aa18.37■□□□□ 0.53
LMBR1-220ENST00000609081 RRP1P56182 461 aaKnown RBP18.37■□□□□ 0.53
LMBR1-220ENST00000609081 SH3RF3Q8TEJ3 882 aaPredicted RBP18.37■□□□□ 0.53
LMBR1-220ENST00000609081 ZFYVE28Q9HCC9 887 aa18.37■□□□□ 0.53
LMBR1-220ENST00000609081 DOCK1Q14185 1865 aa18.37■□□□□ 0.53
LMBR1-220ENST00000609081 CXCL11O14625 94 aa18.36■□□□□ 0.53
LMBR1-220ENST00000609081 CRHR2Q13324 411 aa18.36■□□□□ 0.53
LMBR1-220ENST00000609081 ERO1AQ96HE7 468 aa18.36■□□□□ 0.53
LMBR1-220ENST00000609081 PI4KBQ9UBF8 816 aa18.36■□□□□ 0.53
LMBR1-220ENST00000609081 TAF1CQ15572 869 aaPredicted RBP18.35■□□□□ 0.53
LMBR1-220ENST00000609081 ADGRA1Q86SQ6 560 aa18.35■□□□□ 0.53
LMBR1-220ENST00000609081 TBC1D2Q9BYX2 928 aa18.35■□□□□ 0.53
LMBR1-220ENST00000609081 DCTPP1Q9H773 170 aa18.35■□□□□ 0.53
LMBR1-220ENST00000609081 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.35■□□□□ 0.53
LMBR1-220ENST00000609081 ATP5JP18859 108 aa18.34■□□□□ 0.53
LMBR1-220ENST00000609081 ARHGEF6Q15052 776 aa18.34■□□□□ 0.53
LMBR1-220ENST00000609081 FOXP4Q8IVH2 680 aaPredicted RBP18.34■□□□□ 0.53
LMBR1-220ENST00000609081 MAGEB6Q8N7X4 407 aa18.34■□□□□ 0.53
LMBR1-220ENST00000609081 R3HDMLQ9H3Y0 253 aa18.34■□□□□ 0.53
LMBR1-220ENST00000609081 ANTXR1Q9H6X2 564 aa18.34■□□□□ 0.53
LMBR1-220ENST00000609081 FLT1P17948 1338 aa18.33■□□□□ 0.53
LMBR1-220ENST00000609081 PTPRAP18433 802 aa18.33■□□□□ 0.52
LMBR1-220ENST00000609081 AAMPQ13685 434 aa18.33■□□□□ 0.52
LMBR1-220ENST00000609081 FASTKD5Q7L8L6 764 aaKnown RBP18.33■□□□□ 0.52
LMBR1-220ENST00000609081 ANKRD23Q86SG2 305 aa18.33■□□□□ 0.52
LMBR1-220ENST00000609081 FAM43AQ8N2R8 423 aa18.33■□□□□ 0.52
LMBR1-220ENST00000609081 TGFBRAP1Q8WUH2 860 aa18.33■□□□□ 0.52
LMBR1-220ENST00000609081 BTBD19C9JJ37 291 aa18.32■□□□□ 0.52
LMBR1-220ENST00000609081 HLA-DOAP06340 250 aa18.32■□□□□ 0.52
LMBR1-220ENST00000609081 SP3Q02447 781 aa18.32■□□□□ 0.52
LMBR1-220ENST00000609081 FBXO46Q6PJ61 603 aaPredicted RBP18.32■□□□□ 0.52
LMBR1-220ENST00000609081 METTL16Q86W50 562 aaKnown RBP18.32■□□□□ 0.52
LMBR1-220ENST00000609081 YTHDC1Q96MU7 727 aaKnown RBP18.32■□□□□ 0.52
LMBR1-220ENST00000609081 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.32■□□□□ 0.52
LMBR1-220ENST00000609081 GINM1Q9NU53 330 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms